RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 POLRMTO00411 1230 aaKnown RBP20.56■□□□□ 0.88
VPS13B-201ENST00000355155 FRAT2O75474 233 aaPredicted RBP20.56■□□□□ 0.88
VPS13B-201ENST00000355155 HSP90AA1P07900 732 aaKnown RBP20.56■□□□□ 0.88
VPS13B-201ENST00000355155 KCNJ4P48050 445 aa20.56■□□□□ 0.88
VPS13B-201ENST00000355155 PI16Q6UXB8 463 aa20.56■□□□□ 0.88
VPS13B-201ENST00000355155 SPRYD3Q8NCJ5 442 aa20.56■□□□□ 0.88
VPS13B-201ENST00000355155 PHF14O94880 888 aa20.55■□□□□ 0.88
VPS13B-201ENST00000355155 PDE6AP16499 860 aa20.55■□□□□ 0.88
VPS13B-201ENST00000355155 MCM4P33991 863 aa20.55■□□□□ 0.88
VPS13B-201ENST00000355155 BLOC1S2Q6QNY1 142 aa20.55■□□□□ 0.88
VPS13B-201ENST00000355155 TNPO1Q92973 898 aaKnown RBP20.55■□□□□ 0.88
VPS13B-201ENST00000355155 WDR19Q8NEZ3 1342 aa20.55■□□□□ 0.88
VPS13B-201ENST00000355155 PTMSP20962 102 aa20.54■□□□□ 0.88
VPS13B-201ENST00000355155 PNPLA7Q6ZV29 1317 aa20.54■□□□□ 0.88
VPS13B-201ENST00000355155 PUS7LQ9H0K6 701 aaKnown RBP20.54■□□□□ 0.88
VPS13B-201ENST00000355155 GNL3LQ9NVN8 582 aaKnown RBP20.54■□□□□ 0.88
VPS13B-201ENST00000355155 SERPINB2P05120 415 aa20.54■□□□□ 0.88
VPS13B-201ENST00000355155 NBR1Q14596 966 aa20.54■□□□□ 0.88
VPS13B-201ENST00000355155 ZGPATQ8N5A5 531 aaKnown RBP20.54■□□□□ 0.88
VPS13B-201ENST00000355155 NEK1Q96PY6 1258 aa20.54■□□□□ 0.88
VPS13B-201ENST00000355155 LEMD3Q9Y2U8 911 aa20.54■□□□□ 0.88
VPS13B-201ENST00000355155 PDIA4P13667 645 aaKnown RBP20.53■□□□□ 0.88
VPS13B-201ENST00000355155 BCAMP50895 628 aa20.53■□□□□ 0.88
VPS13B-201ENST00000355155 ST5P78524 1137 aa20.53■□□□□ 0.88
VPS13B-201ENST00000355155 DENND2AQ9ULE3 1009 aa20.53■□□□□ 0.88
VPS13B-201ENST00000355155 TAF6LQ9Y6J9 622 aa20.53■□□□□ 0.88
VPS13B-201ENST00000355155 EXOSC10Q01780 885 aaKnown RBP20.53■□□□□ 0.88
VPS13B-201ENST00000355155 DDR1Q08345 913 aa20.53■□□□□ 0.88
VPS13B-201ENST00000355155 ZNF827Q17R98 1081 aa20.53■□□□□ 0.88
VPS13B-201ENST00000355155 TMC4Q7Z404 712 aa20.53■□□□□ 0.88
VPS13B-201ENST00000355155 FAM84BQ96KN1 310 aaPredicted RBP20.53■□□□□ 0.88
VPS13B-201ENST00000355155 CRAMP1Q96RY5 1269 aa20.53■□□□□ 0.88
VPS13B-201ENST00000355155 MAP3K12Q12852 859 aa20.52■□□□□ 0.88
VPS13B-201ENST00000355155 TOB2Q14106 344 aaPredicted RBP20.52■□□□□ 0.88
VPS13B-201ENST00000355155 SLFNL1Q499Z3 407 aa20.52■□□□□ 0.88
VPS13B-201ENST00000355155 GPAA1O43292 621 aa20.52■□□□□ 0.88
VPS13B-201ENST00000355155 SLC9C2Q5TAH2 1124 aa20.51■□□□□ 0.87
VPS13B-201ENST00000355155 STOX1Q6ZVD7 989 aa20.51■□□□□ 0.87
VPS13B-201ENST00000355155 ZNF532Q9HCE3 1301 aa20.51■□□□□ 0.87
VPS13B-201ENST00000355155 CCDC88AQ3V6T2 1871 aa20.51■□□□□ 0.87
VPS13B-201ENST00000355155 DDX11L8A8MPP1 907 aa20.51■□□□□ 0.87
VPS13B-201ENST00000355155 NLGN1Q8N2Q7 840 aa20.51■□□□□ 0.87
VPS13B-201ENST00000355155 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.51■□□□□ 0.87
VPS13B-201ENST00000355155 SALL1Q9NSC2 1324 aa20.51■□□□□ 0.87
VPS13B-201ENST00000355155 BRD1O95696 1058 aa20.5■□□□□ 0.87
VPS13B-201ENST00000355155 EVCP57679 992 aa20.5■□□□□ 0.87
VPS13B-201ENST00000355155 CAVIN4Q5BKX8 364 aa20.5■□□□□ 0.87
VPS13B-201ENST00000355155 GBP4Q96PP9 640 aa20.5■□□□□ 0.87
VPS13B-201ENST00000355155 WWC3Q9ULE0 1092 aa20.5■□□□□ 0.87
VPS13B-201ENST00000355155 ZDHHC9Q9Y397 364 aa20.5■□□□□ 0.87
VPS13B-201ENST00000355155 CHD4Q14839 1912 aa20.5■□□□□ 0.87
VPS13B-201ENST00000355155 SNAP23O00161 211 aa20.5■□□□□ 0.87
VPS13B-201ENST00000355155 APBA3O96018 575 aa20.5■□□□□ 0.87
VPS13B-201ENST00000355155 FBXO41Q8TF61 875 aa20.5■□□□□ 0.87
VPS13B-201ENST00000355155 STRBPQ96SI9 672 aaKnown RBP20.5■□□□□ 0.87
VPS13B-201ENST00000355155 COL11A2P13942 1736 aaPredicted RBP20.5■□□□□ 0.87
VPS13B-201ENST00000355155 PODXL2Q9NZ53 605 aa20.49■□□□□ 0.87
VPS13B-201ENST00000355155 GNAT2P19087 354 aa20.49■□□□□ 0.87
VPS13B-201ENST00000355155 ST3GAL1Q11201 340 aa20.49■□□□□ 0.87
VPS13B-201ENST00000355155 DHX32Q7L7V1 743 aaKnown RBP20.49■□□□□ 0.87
VPS13B-201ENST00000355155 WASHC4Q2M389 1173 aa20.49■□□□□ 0.87
VPS13B-201ENST00000355155 RBM17Q96I25 401 aaKnown RBP20.49■□□□□ 0.87
VPS13B-201ENST00000355155 E7EWF7 191 aa20.48■□□□□ 0.87
VPS13B-201ENST00000355155 BBOX1O75936 387 aa20.48■□□□□ 0.87
VPS13B-201ENST00000355155 XDHP47989 1333 aa20.48■□□□□ 0.87
VPS13B-201ENST00000355155 FGAP02671 866 aa20.48■□□□□ 0.87
VPS13B-201ENST00000355155 CPA1P15085 419 aa20.48■□□□□ 0.87
VPS13B-201ENST00000355155 COL23A1Q86Y22 540 aaPredicted RBP20.48■□□□□ 0.87
VPS13B-201ENST00000355155 TPCN1Q9ULQ1 816 aa20.48■□□□□ 0.87
VPS13B-201ENST00000355155 ME3Q16798 604 aa20.47■□□□□ 0.87
VPS13B-201ENST00000355155 IMMTQ16891 758 aaKnown RBP20.47■□□□□ 0.87
VPS13B-201ENST00000355155 POTEAQ6S8J7 498 aa20.47■□□□□ 0.87
VPS13B-201ENST00000355155 PATL2C9JE40 543 aaKnown RBP20.46■□□□□ 0.87
VPS13B-201ENST00000355155 LARGE1O95461 756 aa20.46■□□□□ 0.87
VPS13B-201ENST00000355155 BRIP1Q9BX63 1249 aa20.46■□□□□ 0.87
VPS13B-201ENST00000355155 IDH1O75874 414 aaKnown RBP20.46■□□□□ 0.87
VPS13B-201ENST00000355155 COL9A3Q14050 684 aaPredicted RBP20.46■□□□□ 0.87
VPS13B-201ENST00000355155 FOXD4L1Q9NU39 408 aa20.46■□□□□ 0.87
VPS13B-201ENST00000355155 GYG1P46976 350 aa20.45■□□□□ 0.86
VPS13B-201ENST00000355155 LAMB1P07942 1786 aa20.45■□□□□ 0.86
VPS13B-201ENST00000355155 HIBADHP31937 336 aaKnown RBP20.45■□□□□ 0.86
VPS13B-201ENST00000355155 MB21D2Q8IYB1 491 aaPredicted RBP20.45■□□□□ 0.86
VPS13B-201ENST00000355155 CAMKK2Q96RR4 588 aa20.45■□□□□ 0.86
VPS13B-201ENST00000355155 BAG4O95429 457 aaKnown RBP20.44■□□□□ 0.86
VPS13B-201ENST00000355155 ATP2B4P23634 1241 aa20.44■□□□□ 0.86
VPS13B-201ENST00000355155 MAGEB6Q8N7X4 407 aa20.44■□□□□ 0.86
VPS13B-201ENST00000355155 RPGRQ92834 1020 aaKnown RBP20.44■□□□□ 0.86
VPS13B-201ENST00000355155 TDRD7Q8NHU6 1098 aaKnown RBP20.43■□□□□ 0.86
VPS13B-201ENST00000355155 NBPF3Q9H094 633 aa20.43■□□□□ 0.86
VPS13B-201ENST00000355155 TFCP2L1Q9NZI6 479 aa20.43■□□□□ 0.86
VPS13B-201ENST00000355155 DLEC1Q9Y238 1755 aa20.43■□□□□ 0.86
VPS13B-201ENST00000355155 RGS22Q8NE09 1264 aa20.43■□□□□ 0.86
VPS13B-201ENST00000355155 CHMP4CQ96CF2 233 aa20.43■□□□□ 0.86
VPS13B-201ENST00000355155 LLPHQ9BRT6 129 aaKnown RBP20.43■□□□□ 0.86
VPS13B-201ENST00000355155 MTA3Q9BTC8 594 aa20.43■□□□□ 0.86
VPS13B-201ENST00000355155 GIMAP6Q6P9H5 292 aa20.42■□□□□ 0.86
VPS13B-201ENST00000355155 PFKFB2O60825 505 aa20.42■□□□□ 0.86
VPS13B-201ENST00000355155 ZNF274Q96GC6 653 aaPredicted RBP20.42■□□□□ 0.86
VPS13B-201ENST00000355155 WDR33Q9C0J8 1336 aaKnown RBP20.42■□□□□ 0.86
VPS13B-201ENST00000355155 PKP1Q13835 747 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms