RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 BBXQ8WY36 941 aaPredicted RBP14.99□□□□□ -0.01
SCN8A-202ENST00000355133 SSX2IPQ9Y2D8 614 aa14.99□□□□□ -0.01
SCN8A-202ENST00000355133 FERP16591 822 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 SYT1P21579 422 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 C19orf44Q9H6X5 657 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 PKD2L1Q9P0L9 805 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 CCDC171Q6TFL3 1326 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 A2MP01023 1474 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 CCDC155Q8N6L0 562 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 EYA3Q99504 573 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 PAIP2Q9BPZ3 127 aaKnown RBP14.98□□□□□ -0.01
SCN8A-202ENST00000355133 SELENOOQ9BVL4 669 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 HOXC9P31274 260 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 PAXBP1Q9Y5B6 917 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 CTAGE15A4D2H0 777 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 MBD4O95243 580 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 CTAGE8P0CG41 777 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 GIGYF2Q6Y7W6 1299 aaKnown RBP14.98□□□□□ -0.01
SCN8A-202ENST00000355133 CTAGE6Q86UF2 777 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 CTAGE4Q8IX94 777 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 SERPINA10Q9UK55 444 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 TICAM2Q86XR7 235 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 BTG4Q9NY30 223 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 PCDH11XQ9BZA7 1347 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 PCDH11YQ9BZA8 1340 aa14.98□□□□□ -0.01
SCN8A-202ENST00000355133 ASXL2Q76L83 1435 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 RBM17Q96I25 401 aaKnown RBP14.97□□□□□ -0.01
SCN8A-202ENST00000355133 ATP2C2O75185 946 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 TRAPPC3LQ5T215 181 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 SPECC1LQ69YQ0 1117 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 GSTA5Q7RTV2 222 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 OTUD6BQ8N6M0 293 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 FAM89AQ96GI7 184 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 ARL1P40616 181 aaPredicted RBP14.97□□□□□ -0.01
SCN8A-202ENST00000355133 UBXN1Q04323 297 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 DCTPP1Q9H773 170 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 RLBP1P12271 317 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 NCBP1Q09161 790 aaKnown RBP14.97□□□□□ -0.01
SCN8A-202ENST00000355133 GRIPAP1Q4V328 841 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 DHX32Q7L7V1 743 aaKnown RBP14.97□□□□□ -0.01
SCN8A-202ENST00000355133 B4DLN1 442 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 TACC1O75410 805 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 MRPL12P52815 198 aaKnown RBP14.97□□□□□ -0.01
SCN8A-202ENST00000355133 RAB3GAP1Q15042 981 aa14.97□□□□□ -0.01
SCN8A-202ENST00000355133 BACH1O14867 736 aa14.96□□□□□ -0.01
SCN8A-202ENST00000355133 GNA11P29992 359 aa14.96□□□□□ -0.01
SCN8A-202ENST00000355133 RUFY3Q7L099 469 aa14.96□□□□□ -0.01
SCN8A-202ENST00000355133 CCDC50Q8IVM0 306 aa14.96□□□□□ -0.01
SCN8A-202ENST00000355133 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
SCN8A-202ENST00000355133 ZFP91Q96JP5 570 aaPredicted RBP14.96□□□□□ -0.01
SCN8A-202ENST00000355133 TTC12Q9H892 705 aaPredicted RBP14.96□□□□□ -0.01
SCN8A-202ENST00000355133 NPATQ14207 1427 aa14.96□□□□□ -0.01
SCN8A-202ENST00000355133 PARP1P09874 1014 aaKnown RBP14.96□□□□□ -0.01
SCN8A-202ENST00000355133 DTHD1Q6ZMT9 781 aa14.96□□□□□ -0.01
SCN8A-202ENST00000355133 DUOX2Q9NRD8 1548 aa14.96□□□□□ -0.01
SCN8A-202ENST00000355133 RASAL2Q9UJF2 1139 aa14.96□□□□□ -0.01
SCN8A-202ENST00000355133 GJA3Q9Y6H8 435 aa14.96□□□□□ -0.01
SCN8A-202ENST00000355133 ABCC1P33527 1531 aa14.96□□□□□ -0.02
SCN8A-202ENST00000355133 MRPS9P82933 396 aaKnown RBP14.96□□□□□ -0.02
SCN8A-202ENST00000355133 BMS1Q14692 1282 aaKnown RBP14.95□□□□□ -0.02
SCN8A-202ENST00000355133 HS2ST1Q7LGA3 356 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 GPCPD1Q9NPB8 672 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 PLCB3Q01970 1234 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 NBPF14Q5TI25 921 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 IQCGQ9H095 443 aaKnown RBP14.95□□□□□ -0.02
SCN8A-202ENST00000355133 TYRO3Q06418 890 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 TEX11Q8IYF3 940 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 NEK11Q8NG66 645 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 UFL1O94874 794 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 ZNF174Q15697 407 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 CCDC129Q6ZRS4 1044 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 BICDL2A1A5D9 508 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 LRRC45Q96CN5 670 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 CAPZA3Q96KX2 299 aa14.95□□□□□ -0.02
SCN8A-202ENST00000355133 SYCP2Q9BX26 1530 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 SOS1Q07889 1333 aaPredicted RBP14.94□□□□□ -0.02
SCN8A-202ENST00000355133 CPA1P15085 419 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 CHMLP26374 656 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 CNBD1Q8NA66 436 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 CCDC42Q96M95 316 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 DENND2AQ9ULE3 1009 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 ITGA6P23229 1130 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 PRPHP41219 470 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 EIF6P56537 245 aaKnown RBP14.94□□□□□ -0.02
SCN8A-202ENST00000355133 TIMM10P62072 90 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 PLEKHM2Q8IWE5 1019 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 POLR3AO14802 1390 aaPredicted RBP14.94□□□□□ -0.02
SCN8A-202ENST00000355133 KCNA6P17658 529 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 IP6K1Q92551 441 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 LETM2Q2VYF4 491 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 PRAG1Q86YV5 1406 aa14.94□□□□□ -0.02
SCN8A-202ENST00000355133 KIF5AQ12840 1032 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 TTC6Q86TZ1 520 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 DDX12PQ92771 950 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 NOLC1Q14978 699 aaKnown RBP eCLIP14.93□□□□□ -0.02
SCN8A-202ENST00000355133 KARSQ15046 597 aaKnown RBP14.93□□□□□ -0.02
SCN8A-202ENST00000355133 G2E3Q7L622 706 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 SNX21Q969T3 373 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 ZBTB9Q96C00 473 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 RBM28Q9NW13 759 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms