RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 CCDC125Q86Z20 511 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 NAIPQ13075 1403 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 RIOK3O14730 519 aaKnown RBP6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 FOXO3O43524 673 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 RAPGEF1Q13905 1077 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 C9orf84Q5VXU9 1444 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 NACA2Q9H009 215 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 EPB41P11171 864 aaKnown RBP6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 TUBB4BP68371 445 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 TTC31Q49AM3 519 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 ZSCAN23Q3MJ62 389 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 ZNF804AQ7Z570 1209 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 CCDC26Q8TAB7 109 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 TRIM75PA6NK02 468 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 ABCC11Q96J66 1382 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 FYB2Q5VWT5 728 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 GUCA1BQ9UMX6 200 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 PI4KAP2A4QPH2 592 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 CACNA2D3Q8IZS8 1091 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 PI4KAP1Q8N8J0 262 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 VPS18Q9P253 973 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 NECAB1Q8N987 351 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 MRPS27Q92552 414 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 ZNF830Q96NB3 372 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 GKAP1Q5VSY0 366 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 TBC1D2Q9BYX2 928 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 HAUS2Q9NVX0 235 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 TNNI2P48788 182 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 MCM7P33993 719 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 RFC1P35251 1148 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 IFNL2Q8IZJ0 200 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 RAB3IPQ96QF0 476 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 TMCO4Q5TGY1 634 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 NOC2LQ9Y3T9 749 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 PPP2R5DQ14738 602 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 SNRPA1P09661 255 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 ZSCAN22P10073 491 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 ARFGAP2Q8N6H7 521 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 CASQ2O14958 399 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 TRIM6Q9C030 488 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 MAGEB6P1A0A0J9YX57 407 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 SPOPO43791 374 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 ARID4AP29374 1257 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 LMOD1P29536 600 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 DTHD1Q6ZMT9 781 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 PLCG2P16885 1265 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 NSMCE1Q8WV22 266 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 JARID2Q92833 1246 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 PIK3R4Q99570 1358 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 KARSQ15046 597 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 CNGA1P29973 690 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 NBPF11Q86T75 865 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 NLRP3Q96P20 1036 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 NYXQ9GZU5 481 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 GNA11P29992 359 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 FAM160A1Q05DH4 1040 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 LEO1Q8WVC0 666 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 GPHNQ9NQX3 736 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 MCMDC2Q4G0Z9 681 aa6.5□□□□□ -1.37
SRGAP1-201ENST00000355086 NEDD9Q14511 834 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 RILPL1Q5EBL4 403 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 BRF1Q92994 677 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 UTP11Q9Y3A2 253 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 CALCOCO2Q13137 446 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 BIRC3Q13489 604 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 ZNF569Q5MCW4 686 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 IFT74Q96LB3 600 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 ZC3H12CQ9C0D7 883 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 LZTFL1Q9NQ48 299 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 IQSEC3Q9UPP2 1182 aaPredicted RBP6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 Q6ZUG5 572 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 ANKFY1Q9P2R3 1169 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 LUC7L2Q9Y383 392 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 ZNF131P52739 623 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 TNNC1P63316 161 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 FAM76AQ8TAV0 307 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 RTL9Q8NET4 1388 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 ZBTB9Q96C00 473 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 SYNJ2O15056 1496 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 GNAT2P19087 354 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 SRGAP1Q7Z6B7 1085 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 TRPC3Q13507 836 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 CLSTN2Q9H4D0 955 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 GBP1P32455 592 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 SMTNP53814 917 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 BRDTQ58F21 947 aaPredicted RBP6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 CCT6AP40227 531 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 WDR46O15213 610 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 RPL13P26373 211 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 CAMSAP2Q08AD1 1489 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 TMX3Q96JJ7 454 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 PHF8Q9UPP1 1060 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 ACSBG1Q96GR2 724 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 CPSF2Q9P2I0 782 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 KIAA1107Q9UPP5 1409 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 ZBTB24O43167 697 aaPredicted RBP6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 PDE1CQ14123 709 aaPredicted RBP6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 ARHGEF2Q92974 986 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 POLD1P28340 1107 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms