RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 KCNG4Q8TDN1 519 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 CCDC34Q96HJ3 373 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 NYXQ9GZU5 481 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 NID2Q14112 1375 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 CPLX1O14810 134 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 SEMA3EO15041 775 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 LARGE1O95461 756 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 CYP21A2P08686 494 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 ADD2P35612 726 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 FKBP4Q02790 459 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNF38-203ENST00000353739 STX1AQ16623 288 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 STK36Q9NRP7 1315 aa4.36□□□□□ -1.71
RNF38-203ENST00000353739 PDS5AQ29RF7 1337 aaKnown RBP4.35□□□□□ -1.71
RNF38-203ENST00000353739 SPATA31A1Q5TZJ5 1347 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 ERICH2A1L162 156 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 PTPDC1A2A3K4 754 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 M0R2C6 588 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 KDM4AO75164 1064 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 CHAF1AQ13111 956 aaPredicted RBP4.35□□□□□ -1.71
RNF38-203ENST00000353739 DDB1Q16531 1140 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 TPRNQ4KMQ1 711 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 LRRC24Q50LG9 513 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 LEO1Q8WVC0 666 aaPredicted RBP4.35□□□□□ -1.71
RNF38-203ENST00000353739 BRF1Q92994 677 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 CCDC196A0A1B0GTZ2 297 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 A0A1W2PQ27 194 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 A0A1W2PQ64 194 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 A0A1W2PQD8 194 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 NRDCO43847 1150 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 KINO60870 393 aaKnown RBP4.35□□□□□ -1.71
RNF38-203ENST00000353739 OFD1O75665 1012 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 PDE8BO95263 885 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 CLEC4GQ6UXB4 293 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 RBM43Q6ZSC3 357 aaKnown RBP4.35□□□□□ -1.71
RNF38-203ENST00000353739 CDC37L1Q7L3B6 337 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 CERS3Q8IU89 383 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 NECAB1Q8N987 351 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 NSUN7Q8NE18 718 aaKnown RBP4.35□□□□□ -1.71
RNF38-203ENST00000353739 TTLL11Q8NHH1 800 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 AIDAQ96BJ3 306 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 MAP7D2Q96T17 732 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 MPHOSPH8Q99549 860 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 RRAGDQ9NQL2 400 aaPredicted RBP4.35□□□□□ -1.71
RNF38-203ENST00000353739 RIPOR2Q9Y4F9 1068 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 C4AP0C0L4 1744 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 C4BP0C0L5 1744 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 NUP98P52948 1817 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 PRC1O43663 620 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 GADD45BO75293 160 aaPredicted RBP4.35□□□□□ -1.71
RNF38-203ENST00000353739 YEATS4O95619 227 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 SCRN1Q12765 414 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 ZNF330Q9Y3S2 320 aaPredicted RBP4.35□□□□□ -1.71
RNF38-203ENST00000353739 PNPLA7Q6ZV29 1317 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 SALL1Q9NSC2 1324 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 GOLGA6L19H0YKK7 550 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 STK3Q13188 491 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 GNL2Q13823 731 aaKnown RBP4.35□□□□□ -1.71
RNF38-203ENST00000353739 ANO10Q9NW15 660 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 CEP131Q9UPN4 1083 aa4.35□□□□□ -1.71
RNF38-203ENST00000353739 CCDC69A6NI79 296 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 SLC3A2P08195 630 aaKnown RBP4.34□□□□□ -1.71
RNF38-203ENST00000353739 XBP1P17861 261 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 PIP4K2AP48426 406 aaPredicted RBP4.34□□□□□ -1.71
RNF38-203ENST00000353739 SAFBQ15424 915 aaKnown RBP eCLIP4.34□□□□□ -1.71
RNF38-203ENST00000353739 CCDC178Q5BJE1 867 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 CCDC129Q6ZRS4 1044 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 MB21D2Q8IYB1 491 aaPredicted RBP4.34□□□□□ -1.71
RNF38-203ENST00000353739 C8orf76Q96K31 380 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 ANKRD2Q9GZV1 360 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 SPATA31A5Q5VU36 1347 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 SPATA31A7Q8IWB4 1347 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 CNTNAP4Q9C0A0 1308 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 KDM4FA0A1W2PPD8 638 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 GOLGA8BA8MQT2 603 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 PATL2C9JE40 543 aaKnown RBP4.34□□□□□ -1.71
RNF38-203ENST00000353739 GPAA1O43292 621 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 CPA1P15085 419 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 PDIA3P30101 505 aaKnown RBP4.34□□□□□ -1.71
RNF38-203ENST00000353739 SPATA5Q8NB90 893 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 RTEL1Q9NZ71 1219 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 ASAP1Q9ULH1 1129 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 NAP1L2Q9ULW6 460 aaPredicted RBP4.34□□□□□ -1.71
RNF38-203ENST00000353739 NHSQ6T4R5 1651 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 USP34Q70CQ2 3546 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 KIAA1551Q9HCM1 1747 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 SMTNL1A8MU46 457 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 CALM1P0DP23 149 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 CALM2P0DP24 149 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 CALM3P0DP25 149 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 ATP6V1AP38606 617 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 TIMM10P62072 90 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 FAM160A1Q05DH4 1040 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 TYRO3Q06418 890 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 ST3GAL1Q11201 340 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 SF3A1Q15459 793 aaKnown RBP4.34□□□□□ -1.71
RNF38-203ENST00000353739 ELOA2Q8IYF1 753 aaPredicted RBP4.34□□□□□ -1.71
RNF38-203ENST00000353739 ZNF594Q96JF6 807 aaPredicted RBP4.34□□□□□ -1.71
RNF38-203ENST00000353739 PRIMPOLQ96LW4 560 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 BPIFA3Q9BQP9 254 aa4.34□□□□□ -1.71
RNF38-203ENST00000353739 POLR3EQ9NVU0 708 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms