RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 STXBP4Q6ZWJ1 553 aa18.24■□□□□ 0.51
PTPN11-201ENST00000351677 RTL9Q8NET4 1388 aa18.24■□□□□ 0.51
PTPN11-201ENST00000351677 PSMA7O14818 248 aa18.24■□□□□ 0.51
PTPN11-201ENST00000351677 MBD4O95243 580 aa18.24■□□□□ 0.51
PTPN11-201ENST00000351677 FAM173BQ6P4H8 233 aa18.24■□□□□ 0.51
PTPN11-201ENST00000351677 ZNF594Q96JF6 807 aaPredicted RBP18.24■□□□□ 0.51
PTPN11-201ENST00000351677 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.24■□□□□ 0.51
PTPN11-201ENST00000351677 NDUFB9Q9Y6M9 179 aa18.24■□□□□ 0.51
PTPN11-201ENST00000351677 RNF123Q5XPI4 1314 aa18.24■□□□□ 0.51
PTPN11-201ENST00000351677 BRAPQ7Z569 592 aa18.24■□□□□ 0.51
PTPN11-201ENST00000351677 PCDH11XQ9BZA7 1347 aa18.23■□□□□ 0.51
PTPN11-201ENST00000351677 PCDH11YQ9BZA8 1340 aa18.23■□□□□ 0.51
PTPN11-201ENST00000351677 LMAN1P49257 510 aa18.23■□□□□ 0.51
PTPN11-201ENST00000351677 SPAG1Q07617 926 aa18.23■□□□□ 0.51
PTPN11-201ENST00000351677 CYLC1P35663 651 aaPredicted RBP18.23■□□□□ 0.51
PTPN11-201ENST00000351677 TTLL12Q14166 644 aaPredicted RBP18.23■□□□□ 0.51
PTPN11-201ENST00000351677 MAATS1Q7Z4T9 603 aa18.23■□□□□ 0.51
PTPN11-201ENST00000351677 EHBP1Q8NDI1 1231 aa18.23■□□□□ 0.51
PTPN11-201ENST00000351677 SUCLG2Q96I99 432 aa18.23■□□□□ 0.51
PTPN11-201ENST00000351677 CALM1P0DP23 149 aa18.22■□□□□ 0.51
PTPN11-201ENST00000351677 CALM2P0DP24 149 aa18.22■□□□□ 0.51
PTPN11-201ENST00000351677 CALM3P0DP25 149 aa18.22■□□□□ 0.51
PTPN11-201ENST00000351677 EZRP15311 586 aaKnown RBP18.22■□□□□ 0.51
PTPN11-201ENST00000351677 ZNF804AQ7Z570 1209 aa18.22■□□□□ 0.51
PTPN11-201ENST00000351677 PLBD2Q8NHP8 589 aa18.22■□□□□ 0.51
PTPN11-201ENST00000351677 ERMNQ8TAM6 284 aa18.22■□□□□ 0.51
PTPN11-201ENST00000351677 SPAG5Q96R06 1193 aa18.22■□□□□ 0.51
PTPN11-201ENST00000351677 PLIN2Q99541 437 aa18.22■□□□□ 0.51
PTPN11-201ENST00000351677 NCOA5Q9HCD5 579 aaKnown RBP18.22■□□□□ 0.51
PTPN11-201ENST00000351677 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
PTPN11-201ENST00000351677 B4E1Z4 1266 aa18.22■□□□□ 0.51
PTPN11-201ENST00000351677 EYA2O00167 538 aa18.22■□□□□ 0.51
PTPN11-201ENST00000351677 SGSM2O43147 1006 aa18.22■□□□□ 0.51
PTPN11-201ENST00000351677 RNF187Q5TA31 235 aaPredicted RBP18.22■□□□□ 0.51
PTPN11-201ENST00000351677 C8orf37Q96NL8 207 aa18.21■□□□□ 0.51
PTPN11-201ENST00000351677 ORAI2Q96SN7 254 aa18.21■□□□□ 0.51
PTPN11-201ENST00000351677 ZHX1Q9UKY1 873 aaPredicted RBP18.21■□□□□ 0.51
PTPN11-201ENST00000351677 KARSQ15046 597 aaKnown RBP18.21■□□□□ 0.51
PTPN11-201ENST00000351677 KRI1Q8N9T8 703 aaKnown RBP18.21■□□□□ 0.51
PTPN11-201ENST00000351677 PBRM1Q86U86 1689 aa18.21■□□□□ 0.51
PTPN11-201ENST00000351677 CTAGE15A4D2H0 777 aa18.21■□□□□ 0.51
PTPN11-201ENST00000351677 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
PTPN11-201ENST00000351677 CTAGE8P0CG41 777 aa18.21■□□□□ 0.51
PTPN11-201ENST00000351677 ITGA6P23229 1130 aa18.21■□□□□ 0.51
PTPN11-201ENST00000351677 CTAGE6Q86UF2 777 aa18.21■□□□□ 0.51
PTPN11-201ENST00000351677 CTAGE4Q8IX94 777 aa18.21■□□□□ 0.51
PTPN11-201ENST00000351677 C6orf50Q9HD87 102 aa18.21■□□□□ 0.51
PTPN11-201ENST00000351677 PUF60Q9UHX1 559 aaKnown RBP18.21■□□□□ 0.51
PTPN11-201ENST00000351677 NSFL1CQ9UNZ2 370 aaKnown RBP18.21■□□□□ 0.51
PTPN11-201ENST00000351677 CTNNA2P26232 953 aa18.2■□□□□ 0.5
PTPN11-201ENST00000351677 CALML3P27482 149 aa18.2■□□□□ 0.5
PTPN11-201ENST00000351677 NYXQ9GZU5 481 aa18.2■□□□□ 0.5
PTPN11-201ENST00000351677 CCDC175P0C221 793 aa18.2■□□□□ 0.5
PTPN11-201ENST00000351677 ZBTB9Q96C00 473 aa18.2■□□□□ 0.5
PTPN11-201ENST00000351677 TPTE2Q6XPS3 522 aa18.2■□□□□ 0.5
PTPN11-201ENST00000351677 BABAM1Q9NWV8 329 aa18.2■□□□□ 0.5
PTPN11-201ENST00000351677 ARID5AQ03989 594 aa18.2■□□□□ 0.5
PTPN11-201ENST00000351677 GCOM1H8Y6P7 765 aaPredicted RBP18.19■□□□□ 0.5
PTPN11-201ENST00000351677 MYZAPP0CAP1 466 aa18.19■□□□□ 0.5
PTPN11-201ENST00000351677 CFAP65Q6ZU64 1925 aaKnown RBP18.19■□□□□ 0.5
PTPN11-201ENST00000351677 RRP36Q96EU6 259 aaKnown RBP18.19■□□□□ 0.5
PTPN11-201ENST00000351677 HS1BP3Q53T59 392 aa18.19■□□□□ 0.5
PTPN11-201ENST00000351677 XAGE2Q96GT9 111 aa18.19■□□□□ 0.5
PTPN11-201ENST00000351677 SLU7O95391 586 aaKnown RBP18.19■□□□□ 0.5
PTPN11-201ENST00000351677 TNNI2P48788 182 aa18.19■□□□□ 0.5
PTPN11-201ENST00000351677 HSPA2P54652 639 aa18.19■□□□□ 0.5
PTPN11-201ENST00000351677 TAOK3Q9H2K8 898 aa18.19■□□□□ 0.5
PTPN11-201ENST00000351677 LZTFL1Q9NQ48 299 aa18.19■□□□□ 0.5
PTPN11-201ENST00000351677 CALCOCO1Q9P1Z2 691 aa18.19■□□□□ 0.5
PTPN11-201ENST00000351677 UBXN1Q04323 297 aa18.19■□□□□ 0.5
PTPN11-201ENST00000351677 MCM6Q14566 821 aa18.19■□□□□ 0.5
PTPN11-201ENST00000351677 KRT222Q8N1A0 295 aa18.19■□□□□ 0.5
PTPN11-201ENST00000351677 BICD1Q96G01 975 aa18.19■□□□□ 0.5
PTPN11-201ENST00000351677 ZFP91Q96JP5 570 aaPredicted RBP18.19■□□□□ 0.5
PTPN11-201ENST00000351677 AOX1Q06278 1338 aa18.18■□□□□ 0.5
PTPN11-201ENST00000351677 A1BGP04217 495 aa18.18■□□□□ 0.5
PTPN11-201ENST00000351677 ARFGAP3Q9NP61 516 aa18.18■□□□□ 0.5
PTPN11-201ENST00000351677 MAGI3Q5TCQ9 1506 aa18.18■□□□□ 0.5
PTPN11-201ENST00000351677 CKAP4Q07065 602 aaKnown RBP18.18■□□□□ 0.5
PTPN11-201ENST00000351677 ARMT1Q9H993 441 aa18.18■□□□□ 0.5
PTPN11-201ENST00000351677 FAM160A1Q05DH4 1040 aa18.18■□□□□ 0.5
PTPN11-201ENST00000351677 ZNF174Q15697 407 aa18.18■□□□□ 0.5
PTPN11-201ENST00000351677 HOXB7P09629 217 aa18.18■□□□□ 0.5
PTPN11-201ENST00000351677 SYT10Q6XYQ8 523 aa18.18■□□□□ 0.5
PTPN11-201ENST00000351677 OTUD7BQ6GQQ9 843 aa18.17■□□□□ 0.5
PTPN11-201ENST00000351677 VWA3AA6NCI4 1184 aa18.17■□□□□ 0.5
PTPN11-201ENST00000351677 GADD45BO75293 160 aaPredicted RBP18.17■□□□□ 0.5
PTPN11-201ENST00000351677 LDHBP07195 334 aaKnown RBP18.17■□□□□ 0.5
PTPN11-201ENST00000351677 BTG4Q9NY30 223 aa18.17■□□□□ 0.5
PTPN11-201ENST00000351677 CTAGE9A4FU28 777 aa18.17■□□□□ 0.5
PTPN11-201ENST00000351677 CCDC174Q6PII3 467 aa18.17■□□□□ 0.5
PTPN11-201ENST00000351677 CCDC91Q7Z6B0 441 aa18.17■□□□□ 0.5
PTPN11-201ENST00000351677 SMARCC2Q8TAQ2 1214 aa18.17■□□□□ 0.5
PTPN11-201ENST00000351677 SLC52A2Q9HAB3 445 aa18.17■□□□□ 0.5
PTPN11-201ENST00000351677 RIMBP2O15034 1052 aa18.17■□□□□ 0.5
PTPN11-201ENST00000351677 HOOK3Q86VS8 718 aa18.17■□□□□ 0.5
PTPN11-201ENST00000351677 FAM107BQ9H098 131 aa18.17■□□□□ 0.5
PTPN11-201ENST00000351677 RTCBQ9Y3I0 505 aaKnown RBP18.17■□□□□ 0.5
PTPN11-201ENST00000351677 IFI16Q16666 785 aaKnown RBP18.16■□□□□ 0.5
PTPN11-201ENST00000351677 DTHD1Q6ZMT9 781 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms