RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 SETDB2Q96T68 719 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 SRP68Q9UHB9 627 aaKnown RBP12.18□□□□□ -0.46
SMPD4-201ENST00000351288 NRBP1Q9UHY1 535 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 B4E1Z4 1266 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 PRC1O43663 620 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 SASS6Q6UVJ0 657 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 HAUS7Q99871 368 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 INCENPQ9NQS7 918 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 NCAPD2Q15021 1401 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 PDE8AO60658 829 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 MBD4O95243 580 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 ANKRD18AQ8IVF6 992 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 RASSF8Q8NHQ8 419 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 USP21Q9UK80 565 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 CCDC69A6NI79 296 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 CASP7P55210 303 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 KIAA2012Q0VF49 1180 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 MAP3K11Q16584 847 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 CAVIN4Q5BKX8 364 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 SUSD4Q5VX71 490 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 OSBP2Q969R2 916 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 IL17RAQ96F46 866 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 AK7Q96M32 723 aa12.17□□□□□ -0.46
SMPD4-201ENST00000351288 GNL3LQ9NVN8 582 aaKnown RBP12.17□□□□□ -0.46
SMPD4-201ENST00000351288 ORC3Q9UBD5 711 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-201ENST00000351288 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-201ENST00000351288 HSPD1P10809 573 aaKnown RBP12.16□□□□□ -0.46
SMPD4-201ENST00000351288 TYRO3Q06418 890 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 LRMPQ12912 555 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 PYCARDQ9ULZ3 195 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 SOS2Q07890 1332 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-201ENST00000351288 F8W031 263 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-201ENST00000351288 ZSCAN25Q6NSZ9 544 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 CMTR1Q8N1G2 835 aaKnown RBP12.16□□□□□ -0.46
SMPD4-201ENST00000351288 TMEM87AQ8NBN3 555 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 TTLL11Q8NHH1 800 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 NACAP1Q9BZK3 213 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 SLC4A4Q9Y6R1 1079 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 SRCAPQ6ZRS2 3230 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 hCG_1642624A0A1W2PR95 340 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 PTPDC1A2A3K4 754 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 GOLGA6L19H0YKK7 550 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 CCDC192P0DO97 292 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 CTDSPL2Q05D32 466 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 C8orf76Q96K31 380 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 PUS7LQ9H0K6 701 aaKnown RBP12.16□□□□□ -0.46
SMPD4-201ENST00000351288 MAST3O60307 1309 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 ZNF532Q9HCE3 1301 aa12.16□□□□□ -0.46
SMPD4-201ENST00000351288 BIN1O00499 593 aa12.15□□□□□ -0.46
SMPD4-201ENST00000351288 PCCAP05165 728 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-201ENST00000351288 PTGS1P23219 599 aa12.15□□□□□ -0.46
SMPD4-201ENST00000351288 ATP2B2Q01814 1243 aa12.15□□□□□ -0.46
SMPD4-201ENST00000351288 RABL6Q3YEC7 729 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-201ENST00000351288 USPL1Q5W0Q7 1092 aa12.15□□□□□ -0.46
SMPD4-201ENST00000351288 CCDC102BQ68D86 513 aa12.15□□□□□ -0.46
SMPD4-201ENST00000351288 UBAC1Q9BSL1 405 aa12.15□□□□□ -0.46
SMPD4-201ENST00000351288 HMG20BQ9P0W2 317 aa12.15□□□□□ -0.46
SMPD4-201ENST00000351288 PPP1R1BQ9UD71 204 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-201ENST00000351288 E7EWF7 191 aa12.15□□□□□ -0.46
SMPD4-201ENST00000351288 TMEM67Q5HYA8 995 aa12.15□□□□□ -0.46
SMPD4-201ENST00000351288 DHX32Q7L7V1 743 aaKnown RBP12.15□□□□□ -0.46
SMPD4-201ENST00000351288 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
SMPD4-201ENST00000351288 NKX2-3Q8TAU0 364 aa12.15□□□□□ -0.46
SMPD4-201ENST00000351288 KCNB2Q92953 911 aa12.15□□□□□ -0.46
SMPD4-201ENST00000351288 CDC5LQ99459 802 aaKnown RBP12.15□□□□□ -0.46
SMPD4-201ENST00000351288 C6orf229H3BNL8 230 aa12.15□□□□□ -0.47
SMPD4-201ENST00000351288 EPB41L2O43491 1005 aaKnown RBP12.15□□□□□ -0.47
SMPD4-201ENST00000351288 NLRP3Q96P20 1036 aa12.15□□□□□ -0.47
SMPD4-201ENST00000351288 TRIM5Q9C035 493 aa12.15□□□□□ -0.47
SMPD4-201ENST00000351288 TMX4Q9H1E5 349 aaPredicted RBP12.15□□□□□ -0.47
SMPD4-201ENST00000351288 MRVI1Q9Y6F6 885 aa12.15□□□□□ -0.47
SMPD4-201ENST00000351288 ZNF500O60304 480 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-201ENST00000351288 CTDNEP1O95476 244 aa12.14□□□□□ -0.47
SMPD4-201ENST00000351288 FGAP02671 866 aa12.14□□□□□ -0.47
SMPD4-201ENST00000351288 CYP19A1P11511 503 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-201ENST00000351288 NCOA7Q8NI08 942 aa12.14□□□□□ -0.47
SMPD4-201ENST00000351288 KINO60870 393 aaKnown RBP12.14□□□□□ -0.47
SMPD4-201ENST00000351288 SART3Q15020 963 aaKnown RBP12.14□□□□□ -0.47
SMPD4-201ENST00000351288 USP28Q96RU2 1077 aa12.14□□□□□ -0.47
SMPD4-201ENST00000351288 NOL10Q9BSC4 688 aaKnown RBP12.14□□□□□ -0.47
SMPD4-201ENST00000351288 FUCA2Q9BTY2 467 aa12.14□□□□□ -0.47
SMPD4-201ENST00000351288 NOLC1Q14978 699 aaKnown RBP eCLIP12.14□□□□□ -0.473e-9■□□□□ 10.1
SMPD4-201ENST00000351288 MARCH10Q8NA82 808 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-201ENST00000351288 SDR42E1Q8WUS8 393 aa12.14□□□□□ -0.47
SMPD4-201ENST00000351288 CBX8Q9HC52 389 aa12.14□□□□□ -0.47
SMPD4-201ENST00000351288 RTCBQ9Y3I0 505 aaKnown RBP12.14□□□□□ -0.47
SMPD4-201ENST00000351288 SLIT3O75094 1523 aa12.13□□□□□ -0.47
SMPD4-201ENST00000351288 MARCKSP29966 332 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-201ENST00000351288 MCM5P33992 734 aa12.13□□□□□ -0.47
SMPD4-201ENST00000351288 PHKBQ93100 1093 aa12.13□□□□□ -0.47
SMPD4-201ENST00000351288 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
SMPD4-201ENST00000351288 SLC26A6Q9BXS9 759 aa12.13□□□□□ -0.47
SMPD4-201ENST00000351288 PTF1AQ7RTS3 328 aa12.13□□□□□ -0.47
SMPD4-201ENST00000351288 GPR101Q96P66 508 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-201ENST00000351288 KCNF1Q9H3M0 494 aa12.13□□□□□ -0.47
SMPD4-201ENST00000351288 PRKAB2O43741 272 aa12.13□□□□□ -0.47
SMPD4-201ENST00000351288 ARID5BQ14865 1188 aa12.13□□□□□ -0.47
SMPD4-201ENST00000351288 DZIP1Q86YF9 867 aaKnown RBP12.13□□□□□ -0.47
SMPD4-201ENST00000351288 NSUN7Q8NE18 718 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms