RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 ITGB4P16144 1822 aa19.51■□□□□ 0.71
PDAP1-201ENST00000350498 UBN2Q6ZU65 1347 aa19.5■□□□□ 0.71
PDAP1-201ENST00000350498 IRS4O14654 1257 aaPredicted RBP19.5■□□□□ 0.71
PDAP1-201ENST00000350498 TRIM28Q13263 835 aaKnown RBP19.5■□□□□ 0.71
PDAP1-201ENST00000350498 ILDR1Q86SU0 546 aaPredicted RBP19.5■□□□□ 0.71
PDAP1-201ENST00000350498 CNNM1Q9NRU3 951 aa19.5■□□□□ 0.71
PDAP1-201ENST00000350498 ELP1O95163 1332 aa19.5■□□□□ 0.71
PDAP1-201ENST00000350498 ACSBG1Q96GR2 724 aa19.5■□□□□ 0.71
PDAP1-201ENST00000350498 SCAND2PQ9GZW5 306 aaPredicted RBP19.5■□□□□ 0.71
PDAP1-201ENST00000350498 DNAJC25Q9H1X3 360 aa19.5■□□□□ 0.71
PDAP1-201ENST00000350498 CCDC186Q7Z3E2 898 aa19.49■□□□□ 0.71
PDAP1-201ENST00000350498 USP28Q96RU2 1077 aa19.49■□□□□ 0.71
PDAP1-201ENST00000350498 AGXT2Q9BYV1 514 aa19.49■□□□□ 0.71
PDAP1-201ENST00000350498 PIH1D3Q9NQM4 214 aaKnown RBP19.49■□□□□ 0.71
PDAP1-201ENST00000350498 GPAA1O43292 621 aa19.49■□□□□ 0.71
PDAP1-201ENST00000350498 PHKA1P46020 1223 aa19.49■□□□□ 0.71
PDAP1-201ENST00000350498 ANTXR2P58335 489 aa19.49■□□□□ 0.71
PDAP1-201ENST00000350498 RXRAP19793 462 aa19.48■□□□□ 0.71
PDAP1-201ENST00000350498 CTSWP56202 376 aa19.48■□□□□ 0.71
PDAP1-201ENST00000350498 NBPF3Q9H094 633 aa19.48■□□□□ 0.71
PDAP1-201ENST00000350498 GOLPH3LQ9H4A5 285 aa19.48■□□□□ 0.71
PDAP1-201ENST00000350498 DNAJC5Q9H3Z4 198 aa19.48■□□□□ 0.71
PDAP1-201ENST00000350498 SENP2Q9HC62 589 aa19.48■□□□□ 0.71
PDAP1-201ENST00000350498 AKAP2Q9Y2D5 859 aa19.48■□□□□ 0.71
PDAP1-201ENST00000350498 RIOK3O14730 519 aaKnown RBP19.47■□□□□ 0.71
PDAP1-201ENST00000350498 IDH1O75874 414 aaKnown RBP19.47■□□□□ 0.71
PDAP1-201ENST00000350498 PLA2G12BQ9BX93 195 aa19.47■□□□□ 0.71
PDAP1-201ENST00000350498 HMGB1P09429 215 aaKnown RBP19.47■□□□□ 0.71
PDAP1-201ENST00000350498 SLC9C2Q5TAH2 1124 aa19.47■□□□□ 0.71
PDAP1-201ENST00000350498 DZIP3Q86Y13 1208 aaKnown RBP19.47■□□□□ 0.71
PDAP1-201ENST00000350498 DRC7Q8IY82 874 aa19.47■□□□□ 0.71
PDAP1-201ENST00000350498 PRIMPOLQ96LW4 560 aa19.47■□□□□ 0.71
PDAP1-201ENST00000350498 MAP7D2Q96T17 732 aa19.47■□□□□ 0.71
PDAP1-201ENST00000350498 BCL2L12Q9HB09 334 aa19.47■□□□□ 0.71
PDAP1-201ENST00000350498 SLIT2O94813 1529 aa19.46■□□□□ 0.71
PDAP1-201ENST00000350498 PRC1O43663 620 aa19.46■□□□□ 0.71
PDAP1-201ENST00000350498 VGLL2Q8N8G2 317 aa19.46■□□□□ 0.71
PDAP1-201ENST00000350498 SEC31BQ9NQW1 1179 aa19.46■□□□□ 0.71
PDAP1-201ENST00000350498 WWC3Q9ULE0 1092 aa19.46■□□□□ 0.71
PDAP1-201ENST00000350498 SALL1Q9NSC2 1324 aa19.46■□□□□ 0.71
PDAP1-201ENST00000350498 BCL9O00512 1426 aa19.46■□□□□ 0.71
PDAP1-201ENST00000350498 FBXW7Q969H0 707 aa19.46■□□□□ 0.71
PDAP1-201ENST00000350498 TRIM5Q9C035 493 aa19.46■□□□□ 0.71
PDAP1-201ENST00000350498 AKAP11Q9UKA4 1901 aa19.45■□□□□ 0.7
PDAP1-201ENST00000350498 ANKRD18BA2A2Z9 1011 aa19.45■□□□□ 0.7
PDAP1-201ENST00000350498 ADAMTS2O95450 1211 aa19.45■□□□□ 0.7
PDAP1-201ENST00000350498 POLR3DP05423 398 aaPredicted RBP19.45■□□□□ 0.7
PDAP1-201ENST00000350498 HMGN5P82970 282 aaKnown RBP19.45■□□□□ 0.7
PDAP1-201ENST00000350498 SMIM5Q71RC9 77 aa19.45■□□□□ 0.7
PDAP1-201ENST00000350498 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.45■□□□□ 0.7
PDAP1-201ENST00000350498 APPBP2Q92624 585 aa19.45■□□□□ 0.7
PDAP1-201ENST00000350498 HPS5Q9UPZ3 1129 aa19.45■□□□□ 0.7
PDAP1-201ENST00000350498 KLF18A0A0U1RQI7 1052 aa19.45■□□□□ 0.7
PDAP1-201ENST00000350498 WTIPA6NIX2 430 aaPredicted RBP19.45■□□□□ 0.7
PDAP1-201ENST00000350498 STK11IPQ8N1F8 1099 aa19.45■□□□□ 0.7
PDAP1-201ENST00000350498 AIFM3Q96NN9 605 aa19.45■□□□□ 0.7
PDAP1-201ENST00000350498 TEX13AQ9BXU3 409 aaPredicted RBP19.45■□□□□ 0.7
PDAP1-201ENST00000350498 CLSTN2Q9H4D0 955 aa19.45■□□□□ 0.7
PDAP1-201ENST00000350498 KIF3AQ9Y496 699 aa19.45■□□□□ 0.7
PDAP1-201ENST00000350498 CARMIL3Q8ND23 1372 aa19.44■□□□□ 0.7
PDAP1-201ENST00000350498 EXOC5O00471 708 aa19.44■□□□□ 0.7
PDAP1-201ENST00000350498 IMMTQ16891 758 aaKnown RBP19.44■□□□□ 0.7
PDAP1-201ENST00000350498 TBC1D10CQ8IV04 446 aa19.44■□□□□ 0.7
PDAP1-201ENST00000350498 MB21D2Q8IYB1 491 aaPredicted RBP19.44■□□□□ 0.7
PDAP1-201ENST00000350498 UBE2Q2LH0YL09 131 aa19.44■□□□□ 0.7
PDAP1-201ENST00000350498 APPP05067 770 aa19.44■□□□□ 0.7
PDAP1-201ENST00000350498 ARID5BQ14865 1188 aa19.44■□□□□ 0.7
PDAP1-201ENST00000350498 CCDC102BQ68D86 513 aa19.44■□□□□ 0.7
PDAP1-201ENST00000350498 CCDC144CPQ8IYA2 1237 aa19.44■□□□□ 0.7
PDAP1-201ENST00000350498 C16orf45Q96MC5 204 aaPredicted RBP19.44■□□□□ 0.7
PDAP1-201ENST00000350498 LLPHQ9BRT6 129 aaKnown RBP19.44■□□□□ 0.7
PDAP1-201ENST00000350498 ZNF165P49910 485 aa19.43■□□□□ 0.7
PDAP1-201ENST00000350498 CCDC144BQ3MJ40 725 aa19.43■□□□□ 0.7
PDAP1-201ENST00000350498 SUSD4Q5VX71 490 aa19.43■□□□□ 0.7
PDAP1-201ENST00000350498 CYB5R4Q7L1T6 521 aa19.43■□□□□ 0.7
PDAP1-201ENST00000350498 CCAR1Q8IX12 1150 aaKnown RBP19.43■□□□□ 0.7
PDAP1-201ENST00000350498 PDE8BO95263 885 aa19.43■□□□□ 0.7
PDAP1-201ENST00000350498 KCNQ4P56696 695 aa19.43■□□□□ 0.7
PDAP1-201ENST00000350498 ZNF532Q9HCE3 1301 aa19.42■□□□□ 0.7
PDAP1-201ENST00000350498 GOLGA8BA8MQT2 603 aa19.42■□□□□ 0.7
PDAP1-201ENST00000350498 GTF2F1P35269 517 aaKnown RBP eCLIP19.42■□□□□ 0.73e-8■■□□□ 13.1
PDAP1-201ENST00000350498 ADD2P35612 726 aa19.42■□□□□ 0.7
PDAP1-201ENST00000350498 C11orf57Q6ZUT1 292 aaPredicted RBP19.42■□□□□ 0.7
PDAP1-201ENST00000350498 ZNF274Q96GC6 653 aaPredicted RBP19.42■□□□□ 0.7
PDAP1-201ENST00000350498 ZSCAN16Q9H4T2 348 aaPredicted RBP19.42■□□□□ 0.7
PDAP1-201ENST00000350498 ZNF213O14771 459 aa19.42■□□□□ 0.7
PDAP1-201ENST00000350498 CBX1P83916 185 aa19.42■□□□□ 0.7
PDAP1-201ENST00000350498 TACC3Q9Y6A5 838 aa19.42■□□□□ 0.7
PDAP1-201ENST00000350498 NUP98P52948 1817 aa19.41■□□□□ 0.7
PDAP1-201ENST00000350498 CDHR2Q9BYE9 1310 aa19.41■□□□□ 0.7
PDAP1-201ENST00000350498 ZNF75DP51815 510 aa19.41■□□□□ 0.7
PDAP1-201ENST00000350498 DISP2A7MBM2 1401 aa19.41■□□□□ 0.7
PDAP1-201ENST00000350498 KIF28PB7ZC32 967 aa19.41■□□□□ 0.7
PDAP1-201ENST00000350498 SNW1Q13573 536 aaKnown RBP19.41■□□□□ 0.7
PDAP1-201ENST00000350498 NAA30Q147X3 362 aaPredicted RBP19.41■□□□□ 0.7
PDAP1-201ENST00000350498 NAA16Q6N069 864 aaPredicted RBP19.41■□□□□ 0.7
PDAP1-201ENST00000350498 MYL10Q9BUA6 226 aa19.41■□□□□ 0.7
PDAP1-201ENST00000350498 DDX19AQ9NUU7 478 aaKnown RBP19.41■□□□□ 0.7
PDAP1-201ENST00000350498 RCOR1Q9UKL0 485 aa19.41■□□□□ 0.7
PDAP1-201ENST00000350498 IQSEC3Q9UPP2 1182 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms