RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SLC9C2Q5TAH2 1124 aa19.75■□□□□ 0.75
SAMM50-201ENST00000350028 FOXP2O15409 715 aa19.74■□□□□ 0.75
SAMM50-201ENST00000350028 GADD45BO75293 160 aaPredicted RBP19.74■□□□□ 0.75
SAMM50-201ENST00000350028 FGAP02671 866 aa19.74■□□□□ 0.75
SAMM50-201ENST00000350028 UBE2HP62256 183 aa19.74■□□□□ 0.75
SAMM50-201ENST00000350028 TTLL5Q6EMB2 1281 aa19.74■□□□□ 0.75
SAMM50-201ENST00000350028 LRSAM1Q6UWE0 723 aa19.74■□□□□ 0.75
SAMM50-201ENST00000350028 CDC5LQ99459 802 aaKnown RBP19.74■□□□□ 0.75
SAMM50-201ENST00000350028 A0A0G2JLW4 131 aa19.73■□□□□ 0.75
SAMM50-201ENST00000350028 ZNF274Q96GC6 653 aaPredicted RBP19.73■□□□□ 0.75
SAMM50-201ENST00000350028 LRRC2Q9BYS8 371 aa19.73■□□□□ 0.75
SAMM50-201ENST00000350028 IDH1O75874 414 aaKnown RBP19.73■□□□□ 0.75
SAMM50-201ENST00000350028 SF3B3Q15393 1217 aaKnown RBP19.73■□□□□ 0.75
SAMM50-201ENST00000350028 SPATA5Q8NB90 893 aa19.73■□□□□ 0.75
SAMM50-201ENST00000350028 SMARCC2Q8TAQ2 1214 aa19.73■□□□□ 0.75
SAMM50-201ENST00000350028 ZNF213O14771 459 aa19.72■□□□□ 0.75
SAMM50-201ENST00000350028 RPS6KA4O75676 772 aa19.72■□□□□ 0.75
SAMM50-201ENST00000350028 PHF14O94880 888 aa19.72■□□□□ 0.75
SAMM50-201ENST00000350028 PDE6AP16499 860 aa19.72■□□□□ 0.75
SAMM50-201ENST00000350028 DNM1Q05193 864 aaKnown RBP19.72■□□□□ 0.75
SAMM50-201ENST00000350028 SCRN1Q12765 414 aa19.72■□□□□ 0.75
SAMM50-201ENST00000350028 PTF1AQ7RTS3 328 aa19.72■□□□□ 0.75
SAMM50-201ENST00000350028 DTNBO60941 627 aa19.71■□□□□ 0.75
SAMM50-201ENST00000350028 NASPP49321 788 aaPredicted RBP19.71■□□□□ 0.75
SAMM50-201ENST00000350028 APOBRQ0VD83 1088 aa19.71■□□□□ 0.75
SAMM50-201ENST00000350028 SLC10A5Q5PT55 438 aa19.71■□□□□ 0.75
SAMM50-201ENST00000350028 NHSQ6T4R5 1651 aa19.71■□□□□ 0.75
SAMM50-201ENST00000350028 ZNF532Q9HCE3 1301 aa19.71■□□□□ 0.75
SAMM50-201ENST00000350028 EVCP57679 992 aa19.71■□□□□ 0.75
SAMM50-201ENST00000350028 HMGN5P82970 282 aaKnown RBP19.71■□□□□ 0.75
SAMM50-201ENST00000350028 ERFEQ4G0M1 354 aa19.71■□□□□ 0.75
SAMM50-201ENST00000350028 CDC37L1Q7L3B6 337 aa19.71■□□□□ 0.75
SAMM50-201ENST00000350028 NCOA7Q8NI08 942 aa19.71■□□□□ 0.75
SAMM50-201ENST00000350028 KIF3AQ9Y496 699 aa19.71■□□□□ 0.75
SAMM50-201ENST00000350028 BTAF1O14981 1849 aa19.71■□□□□ 0.74
SAMM50-201ENST00000350028 SCN7AQ01118 1682 aa19.7■□□□□ 0.74
SAMM50-201ENST00000350028 WDR19Q8NEZ3 1342 aa19.7■□□□□ 0.74
SAMM50-201ENST00000350028 TCRBV5S4A2TA0A5A2 114 aa19.7■□□□□ 0.74
SAMM50-201ENST00000350028 SYCE3A1L190 88 aa19.7■□□□□ 0.74
SAMM50-201ENST00000350028 FIBPO43427 364 aa19.7■□□□□ 0.74
SAMM50-201ENST00000350028 JAK2O60674 1132 aa19.7■□□□□ 0.74
SAMM50-201ENST00000350028 KRT85P78386 507 aa19.7■□□□□ 0.74
SAMM50-201ENST00000350028 CHRNDQ07001 517 aa19.7■□□□□ 0.74
SAMM50-201ENST00000350028 MAP3K12Q12852 859 aa19.7■□□□□ 0.74
SAMM50-201ENST00000350028 NARFQ9UHQ1 456 aa19.7■□□□□ 0.74
SAMM50-201ENST00000350028 MYO5AQ9Y4I1 1855 aaKnown RBP19.7■□□□□ 0.74
SAMM50-201ENST00000350028 SBF2Q86WG5 1849 aa19.69■□□□□ 0.74
SAMM50-201ENST00000350028 DOCK2Q92608 1830 aa19.69■□□□□ 0.74
SAMM50-201ENST00000350028 RXRBP28702 533 aa19.69■□□□□ 0.74
SAMM50-201ENST00000350028 MCM5P33992 734 aa19.69■□□□□ 0.74
SAMM50-201ENST00000350028 RASGRF1Q13972 1273 aa19.69■□□□□ 0.74
SAMM50-201ENST00000350028 ANKRD18AQ8IVF6 992 aa19.69■□□□□ 0.74
SAMM50-201ENST00000350028 KLHL34Q8N239 644 aa19.69■□□□□ 0.74
SAMM50-201ENST00000350028 FAM184AQ8NB25 1140 aa19.69■□□□□ 0.74
SAMM50-201ENST00000350028 ANP32BQ92688 251 aaKnown RBP19.69■□□□□ 0.74
SAMM50-201ENST00000350028 NYXQ9GZU5 481 aa19.69■□□□□ 0.74
SAMM50-201ENST00000350028 LETM1O95202 739 aaPredicted RBP19.68■□□□□ 0.74
SAMM50-201ENST00000350028 PDIA3P30101 505 aaKnown RBP19.68■□□□□ 0.74
SAMM50-201ENST00000350028 HAND2P61296 217 aa19.68■□□□□ 0.74
SAMM50-201ENST00000350028 ALX1Q15699 326 aa19.68■□□□□ 0.74
SAMM50-201ENST00000350028 MB21D2Q8IYB1 491 aaPredicted RBP19.68■□□□□ 0.74
SAMM50-201ENST00000350028 NSUN7Q8NE18 718 aaKnown RBP19.68■□□□□ 0.74
SAMM50-201ENST00000350028 WWC3Q9ULE0 1092 aa19.68■□□□□ 0.74
SAMM50-201ENST00000350028 CCDC183Q5T5S1 534 aa19.68■□□□□ 0.74
SAMM50-201ENST00000350028 RALYLQ86SE5 291 aaKnown RBP19.68■□□□□ 0.74
SAMM50-201ENST00000350028 RBSNQ9H1K0 784 aa19.68■□□□□ 0.74
SAMM50-201ENST00000350028 BCL2L12Q9HB09 334 aa19.68■□□□□ 0.74
SAMM50-201ENST00000350028 SNAP23O00161 211 aa19.67■□□□□ 0.74
SAMM50-201ENST00000350028 PRC1O43663 620 aa19.67■□□□□ 0.74
SAMM50-201ENST00000350028 GTF2E1P29083 439 aaPredicted RBP19.67■□□□□ 0.74
SAMM50-201ENST00000350028 KCNQ4P56696 695 aa19.67■□□□□ 0.74
SAMM50-201ENST00000350028 TBC1D9BQ66K14 1250 aa19.67■□□□□ 0.74
SAMM50-201ENST00000350028 FAM43AQ8N2R8 423 aa19.67■□□□□ 0.74
SAMM50-201ENST00000350028 AIDAQ96BJ3 306 aa19.67■□□□□ 0.74
SAMM50-201ENST00000350028 STRBPQ96SI9 672 aaKnown RBP19.67■□□□□ 0.74
SAMM50-201ENST00000350028 ZSCAN16Q9H4T2 348 aaPredicted RBP19.67■□□□□ 0.74
SAMM50-201ENST00000350028 BSDC1Q9NW68 430 aaPredicted RBP19.67■□□□□ 0.74
SAMM50-201ENST00000350028 ELP1O95163 1332 aa19.67■□□□□ 0.74
SAMM50-201ENST00000350028 ZMYM6O95789 1325 aa19.67■□□□□ 0.74
SAMM50-201ENST00000350028 H3BQV1 296 aa19.66■□□□□ 0.74
SAMM50-201ENST00000350028 BCAMP50895 628 aa19.66■□□□□ 0.74
SAMM50-201ENST00000350028 CCDC173Q0VFZ6 552 aa19.66■□□□□ 0.74
SAMM50-201ENST00000350028 IFFO2Q5TF58 517 aa19.66■□□□□ 0.74
SAMM50-201ENST00000350028 NAA16Q6N069 864 aaPredicted RBP19.66■□□□□ 0.74
SAMM50-201ENST00000350028 CHST3Q7LGC8 479 aa19.66■□□□□ 0.74
SAMM50-201ENST00000350028 FERMT3Q86UX7 667 aa19.66■□□□□ 0.74
SAMM50-201ENST00000350028 SCAND2PQ9GZW5 306 aaPredicted RBP19.66■□□□□ 0.74
SAMM50-201ENST00000350028 CTDNEP1O95476 244 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 APPP05067 770 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 TRDNQ13061 729 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 UBE4AQ14139 1066 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 DDX11Q96FC9 970 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 CCNL1Q9UK58 526 aaPredicted RBP19.65■□□□□ 0.74
SAMM50-201ENST00000350028 PTPDC1A2A3K4 754 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 PATL2C9JE40 543 aaKnown RBP19.65■□□□□ 0.74
SAMM50-201ENST00000350028 ZPR1O75312 459 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 CCT2P78371 535 aaKnown RBP19.65■□□□□ 0.74
SAMM50-201ENST00000350028 RESTQ13127 1097 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 BICDL1Q6ZP65 573 aa19.65■□□□□ 0.74
SAMM50-201ENST00000350028 KRT27Q7Z3Y8 459 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 858.3 ms