RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 ZNF512BQ96KM6 892 aaPredicted RBP16.01■□□□□ 0.15
UBA3-201ENST00000349511 FAM84BQ96KN1 310 aaPredicted RBP16.01■□□□□ 0.15
UBA3-201ENST00000349511 LMBRD1Q9NUN5 540 aa16.01■□□□□ 0.15
UBA3-201ENST00000349511 SNX14Q9Y5W7 946 aa16.01■□□□□ 0.15
UBA3-201ENST00000349511 ARAP2Q8WZ64 1704 aa16.01■□□□□ 0.15
UBA3-201ENST00000349511 MAP4K1Q92918 833 aa16■□□□□ 0.15
UBA3-201ENST00000349511 NSFL1CQ9UNZ2 370 aaKnown RBP16■□□□□ 0.15
UBA3-201ENST00000349511 ZNF804BA4D1E1 1349 aa16■□□□□ 0.15
UBA3-201ENST00000349511 CAVIN4Q5BKX8 364 aa16■□□□□ 0.15
UBA3-201ENST00000349511 ZMYM1Q5SVZ6 1142 aa16■□□□□ 0.15
UBA3-201ENST00000349511 SLC9C2Q5TAH2 1124 aa16■□□□□ 0.15
UBA3-201ENST00000349511 NOL8Q76FK4 1167 aaKnown RBP16■□□□□ 0.15
UBA3-201ENST00000349511 ANKRD2Q9GZV1 360 aa16■□□□□ 0.15
UBA3-201ENST00000349511 PUS7LQ9H0K6 701 aaKnown RBP16■□□□□ 0.15
UBA3-201ENST00000349511 WWC3Q9ULE0 1092 aa16■□□□□ 0.15
UBA3-201ENST00000349511 JAG2Q9Y219 1238 aa16■□□□□ 0.15
UBA3-201ENST00000349511 MAST3O60307 1309 aa15.99■□□□□ 0.15
UBA3-201ENST00000349511 CPA1P15085 419 aa15.99■□□□□ 0.15
UBA3-201ENST00000349511 ZDHHC9Q9Y397 364 aa15.99■□□□□ 0.15
UBA3-201ENST00000349511 TAF6LQ9Y6J9 622 aa15.99■□□□□ 0.15
UBA3-201ENST00000349511 ANKRD31Q8N7Z5 1873 aa15.99■□□□□ 0.15
UBA3-201ENST00000349511 RFX7Q2KHR2 1363 aa15.98■□□□□ 0.15
UBA3-201ENST00000349511 NECTIN1Q15223 517 aa15.98■□□□□ 0.15
UBA3-201ENST00000349511 ADCK5Q3MIX3 580 aa15.98■□□□□ 0.15
UBA3-201ENST00000349511 OLFM4Q6UX06 510 aa15.98■□□□□ 0.15
UBA3-201ENST00000349511 BRIP1Q9BX63 1249 aa15.98■□□□□ 0.15
UBA3-201ENST00000349511 ABCF2Q9UG63 623 aa15.98■□□□□ 0.15
UBA3-201ENST00000349511 NCLP19338 710 aaKnown RBP15.98■□□□□ 0.15
UBA3-201ENST00000349511 NASPP49321 788 aaPredicted RBP15.98■□□□□ 0.15
UBA3-201ENST00000349511 ZNF445P59923 1031 aa15.98■□□□□ 0.15
UBA3-201ENST00000349511 GPSM2P81274 684 aa15.98■□□□□ 0.15
UBA3-201ENST00000349511 TTF1Q15361 905 aaPredicted RBP15.98■□□□□ 0.15
UBA3-201ENST00000349511 CREB3L3Q68CJ9 461 aa15.98■□□□□ 0.15
UBA3-201ENST00000349511 HELLSQ9NRZ9 838 aa15.98■□□□□ 0.15
UBA3-201ENST00000349511 ANAPC15P60006 121 aa15.97■□□□□ 0.15
UBA3-201ENST00000349511 CCDC173Q0VFZ6 552 aa15.97■□□□□ 0.15
UBA3-201ENST00000349511 COL9A3Q14050 684 aaPredicted RBP15.97■□□□□ 0.15
UBA3-201ENST00000349511 CAVIN1Q6NZI2 390 aaKnown RBP15.97■□□□□ 0.15
UBA3-201ENST00000349511 NAP1L5Q96NT1 182 aaPredicted RBP15.97■□□□□ 0.15
UBA3-201ENST00000349511 SLC27A2O14975 620 aa15.97■□□□□ 0.15
UBA3-201ENST00000349511 SRGNP10124 158 aa15.97■□□□□ 0.15
UBA3-201ENST00000349511 ADD2P35612 726 aa15.97■□□□□ 0.15
UBA3-201ENST00000349511 PPP1R9BQ96SB3 815 aa15.97■□□□□ 0.15
UBA3-201ENST00000349511 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.97■□□□□ 0.15
UBA3-201ENST00000349511 ZNF532Q9HCE3 1301 aa15.96■□□□□ 0.15
UBA3-201ENST00000349511 A0A0G2JLW4 131 aa15.96■□□□□ 0.15
UBA3-201ENST00000349511 KLRG2A4D1S0 409 aaPredicted RBP15.96■□□□□ 0.15
UBA3-201ENST00000349511 EPB41L2O43491 1005 aaKnown RBP15.96■□□□□ 0.15
UBA3-201ENST00000349511 HIBADHP31937 336 aaKnown RBP15.96■□□□□ 0.15
UBA3-201ENST00000349511 MAGEB6Q8N7X4 407 aa15.96■□□□□ 0.15
UBA3-201ENST00000349511 ZNF622Q969S3 477 aaKnown RBP eCLIP15.96■□□□□ 0.154e-6■□□□□ 8.2
UBA3-201ENST00000349511 LARP6Q9BRS8 491 aaKnown RBP15.96■□□□□ 0.15
UBA3-201ENST00000349511 GNL3LQ9NVN8 582 aaKnown RBP15.96■□□□□ 0.15
UBA3-201ENST00000349511 MYH7P12883 1935 aa15.96■□□□□ 0.15
UBA3-201ENST00000349511 SRCAPQ6ZRS2 3230 aa15.96■□□□□ 0.15
UBA3-201ENST00000349511 PRPF40AO75400 957 aaKnown RBP15.95■□□□□ 0.14
UBA3-201ENST00000349511 HSPD1P10809 573 aaKnown RBP15.95■□□□□ 0.14
UBA3-201ENST00000349511 PDE6AP16499 860 aa15.95■□□□□ 0.14
UBA3-201ENST00000349511 HOXA10P31260 410 aaPredicted RBP15.95■□□□□ 0.14
UBA3-201ENST00000349511 CHAF1AQ13111 956 aaPredicted RBP15.95■□□□□ 0.14
UBA3-201ENST00000349511 LRRFIP1Q32MZ4 808 aaKnown RBP15.95■□□□□ 0.14
UBA3-201ENST00000349511 ZSCAN23Q3MJ62 389 aa15.95■□□□□ 0.14
UBA3-201ENST00000349511 FBXO33Q7Z6M2 555 aa15.95■□□□□ 0.14
UBA3-201ENST00000349511 APPBP2Q92624 585 aa15.95■□□□□ 0.14
UBA3-201ENST00000349511 LRP2BPQ9P2M1 347 aa15.95■□□□□ 0.14
UBA3-201ENST00000349511 COL1A1P02452 1464 aaPredicted RBP15.95■□□□□ 0.14
UBA3-201ENST00000349511 XDHP47989 1333 aa15.95■□□□□ 0.14
UBA3-201ENST00000349511 ZFYP08048 801 aaPredicted RBP15.95■□□□□ 0.14
UBA3-201ENST00000349511 CASTP20810 708 aaKnown RBP15.95■□□□□ 0.14
UBA3-201ENST00000349511 TMX3Q96JJ7 454 aa15.95■□□□□ 0.14
UBA3-201ENST00000349511 JAKMIP1Q96N16 626 aaKnown RBP15.95■□□□□ 0.14
UBA3-201ENST00000349511 NRXN2Q9P2S2 1712 aa15.94■□□□□ 0.14
UBA3-201ENST00000349511 PPEF1O14829 653 aaPredicted RBP15.94■□□□□ 0.14
UBA3-201ENST00000349511 BBOX1O75936 387 aa15.94■□□□□ 0.14
UBA3-201ENST00000349511 UFL1O94874 794 aa15.94■□□□□ 0.14
UBA3-201ENST00000349511 ZKSCAN1P17029 563 aaPredicted RBP15.94■□□□□ 0.14
UBA3-201ENST00000349511 PDE6BP35913 854 aa15.94■□□□□ 0.14
UBA3-201ENST00000349511 CRAMP1Q96RY5 1269 aa15.94■□□□□ 0.14
UBA3-201ENST00000349511 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
UBA3-201ENST00000349511 GPAA1O43292 621 aa15.94■□□□□ 0.14
UBA3-201ENST00000349511 CHRNA5P30532 468 aa15.94■□□□□ 0.14
UBA3-201ENST00000349511 MAP3K12Q12852 859 aa15.94■□□□□ 0.14
UBA3-201ENST00000349511 GPT2Q8TD30 523 aa15.94■□□□□ 0.14
UBA3-201ENST00000349511 MCM2P49736 904 aa15.93■□□□□ 0.14
UBA3-201ENST00000349511 TTLL5Q6EMB2 1281 aa15.93■□□□□ 0.14
UBA3-201ENST00000349511 ZSCAN25Q6NSZ9 544 aa15.93■□□□□ 0.14
UBA3-201ENST00000349511 ANP32BQ92688 251 aaKnown RBP15.93■□□□□ 0.14
UBA3-201ENST00000349511 RAI14Q9P0K7 980 aa15.93■□□□□ 0.14
UBA3-201ENST00000349511 LEMD3Q9Y2U8 911 aa15.93■□□□□ 0.14
UBA3-201ENST00000349511 CACNA1SQ13698 1873 aa15.92■□□□□ 0.14
UBA3-201ENST00000349511 TCRBV5S4A2TA0A5A2 114 aa15.92■□□□□ 0.14
UBA3-201ENST00000349511 C6orf229H3BNL8 230 aa15.92■□□□□ 0.14
UBA3-201ENST00000349511 CYP21A2P08686 494 aa15.92■□□□□ 0.14
UBA3-201ENST00000349511 NPR1P16066 1061 aa15.92■□□□□ 0.14
UBA3-201ENST00000349511 C2CD5Q86YS7 1000 aa15.92■□□□□ 0.14
UBA3-201ENST00000349511 CHAMP1Q96JM3 812 aa15.92■□□□□ 0.14
UBA3-201ENST00000349511 TCEANC2Q96MN5 208 aa15.92■□□□□ 0.14
UBA3-201ENST00000349511 POLLQ9UGP5 575 aa15.92■□□□□ 0.14
UBA3-201ENST00000349511 FOXP2O15409 715 aa15.92■□□□□ 0.14
UBA3-201ENST00000349511 MIGA1Q8NAN2 632 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms