RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 JAKMIP3Q5VZ66 844 aa17.5■□□□□ 0.39
PTBP1-201ENST00000349038 POLD4Q9HCU8 107 aa17.5■□□□□ 0.39
PTBP1-201ENST00000349038 TLR7Q9NYK1 1049 aaKnown RBP17.5■□□□□ 0.39
PTBP1-201ENST00000349038 SLC3A2P08195 630 aaKnown RBP17.5■□□□□ 0.39
PTBP1-201ENST00000349038 MTX1Q13505 466 aa17.5■□□□□ 0.39
PTBP1-201ENST00000349038 LRRFIP1Q32MZ4 808 aaKnown RBP17.5■□□□□ 0.39
PTBP1-201ENST00000349038 TOB2Q14106 344 aaPredicted RBP17.49■□□□□ 0.39
PTBP1-201ENST00000349038 ECHDC1Q9NTX5 307 aa17.49■□□□□ 0.39
PTBP1-201ENST00000349038 ECM2O94769 699 aaPredicted RBP17.49■□□□□ 0.39
PTBP1-201ENST00000349038 CCDC150Q8NCX0 1101 aa17.49■□□□□ 0.39
PTBP1-201ENST00000349038 SLC26A8Q96RN1 970 aa17.49■□□□□ 0.39
PTBP1-201ENST00000349038 UBR1Q8IWV7 1749 aa17.49■□□□□ 0.39
PTBP1-201ENST00000349038 AKAP17AQ02040 695 aaKnown RBP17.48■□□□□ 0.39
PTBP1-201ENST00000349038 USHBP1Q8N6Y0 703 aa17.48■□□□□ 0.39
PTBP1-201ENST00000349038 DNAAF4Q8WXU2 420 aa17.48■□□□□ 0.39
PTBP1-201ENST00000349038 GPATCH3Q96I76 525 aa17.48■□□□□ 0.39
PTBP1-201ENST00000349038 STRCQ7RTU9 1775 aa17.48■□□□□ 0.39
PTBP1-201ENST00000349038 TNRQ92752 1358 aa17.48■□□□□ 0.39
PTBP1-201ENST00000349038 CDC25BP30305 580 aa17.48■□□□□ 0.39
PTBP1-201ENST00000349038 HOXC9P31274 260 aa17.48■□□□□ 0.39
PTBP1-201ENST00000349038 RBM43Q6ZSC3 357 aaKnown RBP17.48■□□□□ 0.39
PTBP1-201ENST00000349038 MYCBPQ99417 103 aaPredicted RBP17.48■□□□□ 0.39
PTBP1-201ENST00000349038 WDHD1O75717 1129 aaPredicted RBP17.48■□□□□ 0.39
PTBP1-201ENST00000349038 ATP2B1P20020 1258 aa17.48■□□□□ 0.39
PTBP1-201ENST00000349038 RPS6KB1P23443 525 aa17.48■□□□□ 0.39
PTBP1-201ENST00000349038 SPECC1Q5M775 1068 aa17.48■□□□□ 0.39
PTBP1-201ENST00000349038 ADGRL3Q9HAR2 1447 aa17.48■□□□□ 0.39
PTBP1-201ENST00000349038 PARP3Q9Y6F1 533 aa17.48■□□□□ 0.39
PTBP1-201ENST00000349038 MED1Q15648 1581 aaPredicted RBP17.47■□□□□ 0.39
PTBP1-201ENST00000349038 EFCAB8A8MWE9 144 aa17.47■□□□□ 0.39
PTBP1-201ENST00000349038 ZMYND10O75800 440 aa17.47■□□□□ 0.39
PTBP1-201ENST00000349038 PDE6BP35913 854 aa17.47■□□□□ 0.39
PTBP1-201ENST00000349038 RESTQ13127 1097 aa17.47■□□□□ 0.39
PTBP1-201ENST00000349038 MTF1Q14872 753 aa17.47■□□□□ 0.39
PTBP1-201ENST00000349038 KIF4BQ2VIQ3 1234 aa17.47■□□□□ 0.39
PTBP1-201ENST00000349038 BANK1Q8NDB2 785 aa17.47■□□□□ 0.39
PTBP1-201ENST00000349038 RIN2Q8WYP3 895 aaPredicted RBP17.47■□□□□ 0.39
PTBP1-201ENST00000349038 CEMIPQ8WUJ3 1361 aa17.47■□□□□ 0.39
PTBP1-201ENST00000349038 A0A0U1RQJ8 604 aa17.47■□□□□ 0.39
PTBP1-201ENST00000349038 FAM160A1Q05DH4 1040 aa17.47■□□□□ 0.39
PTBP1-201ENST00000349038 ATRIPQ8WXE1 791 aa17.47■□□□□ 0.39
PTBP1-201ENST00000349038 CCDC93Q567U6 631 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 AXDND1Q5T1B0 1012 aaPredicted RBP17.46■□□□□ 0.39
PTBP1-201ENST00000349038 SARM1Q6SZW1 724 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 FUT8Q9BYC5 575 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 SNRKQ9NRH2 765 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 PCDHA7Q9UN72 937 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.46■□□□□ 0.39
PTBP1-201ENST00000349038 PLEKHG1Q9ULL1 1385 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 HOXB7P09629 217 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 EIF4A1P60842 406 aaKnown RBP17.46■□□□□ 0.39
PTBP1-201ENST00000349038 CCDC158Q5M9N0 1113 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 TOGARAM2Q6ZUX3 1019 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 MAP4K1Q92918 833 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 EVI5LQ96CN4 794 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 ADCY9O60503 1353 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 PTPDC1A2A3K4 754 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 SCRN1Q12765 414 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 CWF19L2Q2TBE0 894 aaKnown RBP17.46■□□□□ 0.39
PTBP1-201ENST00000349038 NBPF6Q5VWK0 638 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 TRMT44Q8IYL2 757 aaKnown RBP17.46■□□□□ 0.39
PTBP1-201ENST00000349038 NBPF4Q96M43 638 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 CHPF2Q9P2E5 772 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 PPP2R2CQ9Y2T4 447 aa17.46■□□□□ 0.39
PTBP1-201ENST00000349038 MUM1L1Q5H9M0 696 aa17.45■□□□□ 0.38
PTBP1-201ENST00000349038 CNNM3Q8NE01 707 aa17.45■□□□□ 0.38
PTBP1-201ENST00000349038 MRPS27Q92552 414 aaKnown RBP17.45■□□□□ 0.38
PTBP1-201ENST00000349038 NEK1Q96PY6 1258 aa17.45■□□□□ 0.38
PTBP1-201ENST00000349038 GOLGA1Q92805 767 aa17.45■□□□□ 0.38
PTBP1-201ENST00000349038 CENPHQ9H3R5 247 aa17.45■□□□□ 0.38
PTBP1-201ENST00000349038 ALDH8A1Q9H2A2 487 aaPredicted RBP17.44■□□□□ 0.38
PTBP1-201ENST00000349038 ABCB6Q9NP58 842 aa17.44■□□□□ 0.38
PTBP1-201ENST00000349038 FANCLQ9NW38 375 aa17.44■□□□□ 0.38
PTBP1-201ENST00000349038 CLIC4Q9Y696 253 aa17.44■□□□□ 0.38
PTBP1-201ENST00000349038 MARF1Q9Y4F3 1742 aaKnown RBP17.44■□□□□ 0.38
PTBP1-201ENST00000349038 ANKRD1Q15327 319 aa17.44■□□□□ 0.38
PTBP1-201ENST00000349038 ZNF827Q17R98 1081 aa17.44■□□□□ 0.38
PTBP1-201ENST00000349038 H0YHG0 523 aa17.44■□□□□ 0.38
PTBP1-201ENST00000349038 CTAGE5O15320 804 aa17.44■□□□□ 0.38
PTBP1-201ENST00000349038 CHMP4BP1P59074 171 aa17.44■□□□□ 0.38
PTBP1-201ENST00000349038 FBXW10Q5XX13 1052 aa17.44■□□□□ 0.38
PTBP1-201ENST00000349038 TRIM65Q6PJ69 517 aa17.44■□□□□ 0.38
PTBP1-201ENST00000349038 GPHNQ9NQX3 736 aaPredicted RBP17.44■□□□□ 0.38
PTBP1-201ENST00000349038 COBLO75128 1261 aa17.43■□□□□ 0.38
PTBP1-201ENST00000349038 G3BP1Q13283 466 aaKnown RBP eCLIP17.43■□□□□ 0.382e-9■□□□□ 9.4
PTBP1-201ENST00000349038 KLHL10Q6JEL2 608 aa17.43■□□□□ 0.38
PTBP1-201ENST00000349038 DDX46Q7L014 1031 aaKnown RBP17.43■□□□□ 0.38
PTBP1-201ENST00000349038 ERC1Q8IUD2 1116 aa17.43■□□□□ 0.38
PTBP1-201ENST00000349038 NGDNQ8NEJ9 315 aaKnown RBP17.43■□□□□ 0.38
PTBP1-201ENST00000349038 FAM204AQ9H8W3 233 aa17.43■□□□□ 0.38
PTBP1-201ENST00000349038 KIAA1468Q9P260 1216 aa17.43■□□□□ 0.38
PTBP1-201ENST00000349038 KDM3BQ7LBC6 1761 aa17.43■□□□□ 0.38
PTBP1-201ENST00000349038 PSDA5PKW4 1024 aaPredicted RBP17.43■□□□□ 0.38
PTBP1-201ENST00000349038 GPR161Q8N6U8 529 aaKnown RBP17.43■□□□□ 0.38
PTBP1-201ENST00000349038 NPHP4O75161 1426 aaPredicted RBP17.43■□□□□ 0.38
PTBP1-201ENST00000349038 ZSCAN12O43309 604 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 SYNE3Q6ZMZ3 975 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 RAI14Q9P0K7 980 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 LTKP29376 864 aa17.42■□□□□ 0.38
PTBP1-201ENST00000349038 HAND2P61296 217 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms