RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 LGR6Q9HBX8 967 aa11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 H3BQF6 201 aa11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 H3BQV1 296 aa11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 RNMTO43148 476 aaKnown RBP11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 BRD3Q15059 726 aa11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 IFFO2Q5TF58 517 aa11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 NAA16Q6N069 864 aaPredicted RBP11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 ZNF530Q6P9A1 599 aaPredicted RBP11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 FAM227BQ96M60 508 aa11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 DDX21Q9NR30 783 aaKnown RBP eCLIP11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 ZSCAN12O43309 604 aa11.93□□□□□ -0.5
CHRNA1-202ENST00000348749 TAF5LO75529 589 aa11.93□□□□□ -0.5
CHRNA1-202ENST00000348749 ATP5JP18859 108 aa11.93□□□□□ -0.5
CHRNA1-202ENST00000348749 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
CHRNA1-202ENST00000348749 NBPF6Q5VWK0 638 aa11.93□□□□□ -0.5
CHRNA1-202ENST00000348749 LTV1Q96GA3 475 aaPredicted RBP11.93□□□□□ -0.5
CHRNA1-202ENST00000348749 NBPF4Q96M43 638 aa11.93□□□□□ -0.5
CHRNA1-202ENST00000348749 PARD6BQ9BYG5 372 aa11.93□□□□□ -0.5
CHRNA1-202ENST00000348749 MRFAP1Q9Y605 127 aa11.93□□□□□ -0.5
CHRNA1-202ENST00000348749 A0A0D9SFI3 127 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 GOLGA6L9A6NEM1 432 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 JAK2O60674 1132 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 CPP00450 1065 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 PSEN1P49768 467 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 PPP2R3AQ06190 1150 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 COL9A3Q14050 684 aaPredicted RBP11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 LONRF2Q1L5Z9 754 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 SUGP1Q8IWZ8 645 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 SMARCC2Q8TAQ2 1214 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 HNRNPLLQ8WVV9 542 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 PPM1EQ8WY54 764 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 SUCLG2Q96I99 432 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 MKRN1Q9UHC7 482 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 ATP2B1P20020 1258 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 FMR1NBQ8N0W7 255 aaPredicted RBP11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 FSIP1Q8NA03 581 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 GOLGA1Q92805 767 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 SECISBP2LQ93073 1101 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 ZNF396Q96N95 335 aaPredicted RBP11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 NEK1Q96PY6 1258 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 PHF8Q9UPP1 1060 aa11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 PA2G4Q9UQ80 394 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-202ENST00000348749 A0A087WWV3 80 aa11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 VWA3AA6NCI4 1184 aa11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 EIF3CLB5ME19 914 aaKnown RBP11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 TXLNAP40222 546 aa11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 CORO7P57737 925 aa11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 STK3Q13188 491 aa11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 NUTM2GQ5VZR2 741 aa11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 KAZALD1Q96I82 304 aa11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 EIF3CQ99613 913 aaKnown RBP11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 BICC1Q9H694 974 aaKnown RBP11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 COPRSQ9NQ92 184 aa11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 KIAA1468Q9P260 1216 aa11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 RGPD2P0DJD1 1756 aa11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 SLIT3O75094 1523 aa11.91□□□□□ -0.5
CHRNA1-202ENST00000348749 LOC102724159A0A0B4J2E5 919 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 A0A1W2PQ27 194 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 A0A1W2PQ64 194 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 A0A1W2PQD8 194 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 IKBKBO14920 756 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 KCNQ3O43525 872 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 APOBRQ0VD83 1088 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 NEXNQ0ZGT2 675 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 NCAPHQ15003 741 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 PWP2Q15269 919 aaKnown RBP11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 DPCR1Q3MIW9 517 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 USHBP1Q8N6Y0 703 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 MRPS27Q92552 414 aaKnown RBP11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 DDX11Q96FC9 970 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 TCEANC2Q96MN5 208 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 EPC1Q9H2F5 836 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 ARHGAP6O43182 974 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 PFKFB2O60825 505 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 USP5P45974 858 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 NLRP12P59046 1061 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 FANCCQ00597 558 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 SWT1Q5T5J6 900 aaKnown RBP11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 USP28Q96RU2 1077 aa11.9□□□□□ -0.5
CHRNA1-202ENST00000348749 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
CHRNA1-202ENST00000348749 CBFA2T2O43439 604 aa11.89□□□□□ -0.51
CHRNA1-202ENST00000348749 EIF3JO75822 258 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-202ENST00000348749 CEBPZQ03701 1054 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-202ENST00000348749 GNL2Q13823 731 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-202ENST00000348749 ZRSR1Q15695 479 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-202ENST00000348749 CWF19L2Q2TBE0 894 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-202ENST00000348749 KIFC2Q96AC6 838 aa11.89□□□□□ -0.51
CHRNA1-202ENST00000348749 CCDC8Q9H0W5 538 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-202ENST00000348749 BOLA2Q9H3K6 86 aa11.89□□□□□ -0.51
CHRNA1-202ENST00000348749 DEF6Q9H4E7 631 aa11.89□□□□□ -0.51
CHRNA1-202ENST00000348749 PPP2R2CQ9Y2T4 447 aa11.89□□□□□ -0.51
CHRNA1-202ENST00000348749 AXDND1Q5T1B0 1012 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 ADALQ6DHV7 355 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 HDXQ7Z353 690 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 TMEM139Q8IV31 216 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 SDF4Q9BRK5 362 aa11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 UTP14AQ9BVJ6 771 aaKnown RBP11.88□□□□□ -0.51
CHRNA1-202ENST00000348749 AGXT2Q9BYV1 514 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms