RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 PARP10Q53GL7 1025 aa21.21■□□□□ 0.99
UBE3C-201ENST00000348165 ALS2CR12Q96Q35 445 aa21.21■□□□□ 0.99
UBE3C-201ENST00000348165 GOPCQ9HD26 462 aa21.21■□□□□ 0.99
UBE3C-201ENST00000348165 BABAM1Q9NWV8 329 aa21.21■□□□□ 0.99
UBE3C-201ENST00000348165 CTNNA2P26232 953 aa21.21■□□□□ 0.99
UBE3C-201ENST00000348165 GNG11P61952 73 aa21.21■□□□□ 0.99
UBE3C-201ENST00000348165 SNW1Q13573 536 aaKnown RBP21.21■□□□□ 0.99
UBE3C-201ENST00000348165 ZNF830Q96NB3 372 aaPredicted RBP21.21■□□□□ 0.99
UBE3C-201ENST00000348165 SPDYE3A6NKU9 549 aa21.21■□□□□ 0.99
UBE3C-201ENST00000348165 HOXB7P09629 217 aa21.21■□□□□ 0.99
UBE3C-201ENST00000348165 DHX37Q8IY37 1157 aaKnown RBP21.21■□□□□ 0.99
UBE3C-201ENST00000348165 GIMAP7Q8NHV1 300 aa21.21■□□□□ 0.99
UBE3C-201ENST00000348165 RTL9Q8NET4 1388 aa21.2■□□□□ 0.98
UBE3C-201ENST00000348165 RAD50Q92878 1312 aa21.2■□□□□ 0.98
UBE3C-201ENST00000348165 PLS1Q14651 629 aa21.2■□□□□ 0.98
UBE3C-201ENST00000348165 AOPEPQ8N6M6 819 aa21.2■□□□□ 0.98
UBE3C-201ENST00000348165 FAM200AQ8TCP9 573 aa21.2■□□□□ 0.98
UBE3C-201ENST00000348165 CDCA7Q9BWT1 371 aaPredicted RBP21.2■□□□□ 0.98
UBE3C-201ENST00000348165 POLD1P28340 1107 aa21.2■□□□□ 0.98
UBE3C-201ENST00000348165 EIF4G3O43432 1585 aaKnown RBP21.2■□□□□ 0.98
UBE3C-201ENST00000348165 UFL1O94874 794 aa21.2■□□□□ 0.98
UBE3C-201ENST00000348165 DENND2AQ9ULE3 1009 aa21.2■□□□□ 0.98
UBE3C-201ENST00000348165 DYNC1I1O14576 645 aa21.2■□□□□ 0.98
UBE3C-201ENST00000348165 HLTFQ14527 1009 aaKnown RBP eCLIP21.2■□□□□ 0.981e-6■■□□□ 13.6
UBE3C-201ENST00000348165 SLAIN2Q9P270 581 aa21.2■□□□□ 0.98
UBE3C-201ENST00000348165 MAP9Q49MG5 647 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 XAGE2Q96GT9 111 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 PNMA6EA0A0J9YXQ4 647 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 PSMA7O14818 248 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 TAF5LO75529 589 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 EZRP15311 586 aaKnown RBP21.19■□□□□ 0.98
UBE3C-201ENST00000348165 MCM7P33993 719 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 SUCLG2Q96I99 432 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 SAP30BPQ9UHR5 308 aaKnown RBP21.19■□□□□ 0.98
UBE3C-201ENST00000348165 PDE8AO60658 829 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 LMOD1P29536 600 aaPredicted RBP21.19■□□□□ 0.98
UBE3C-201ENST00000348165 TRERF1Q96PN7 1200 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 MPHOSPH6Q99547 160 aaKnown RBP21.19■□□□□ 0.98
UBE3C-201ENST00000348165 B4E1Z4 1266 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 ECM2O94769 699 aaPredicted RBP21.19■□□□□ 0.98
UBE3C-201ENST00000348165 HIBADHP31937 336 aaKnown RBP21.19■□□□□ 0.98
UBE3C-201ENST00000348165 IFFO1Q0D2I5 559 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 NBPF14Q5TI25 921 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 TEX11Q8IYF3 940 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 DYDC1Q8WWB3 177 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 JADE2Q9NQC1 790 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 NDUFB9Q9Y6M9 179 aa21.19■□□□□ 0.98
UBE3C-201ENST00000348165 LTKP29376 864 aa21.18■□□□□ 0.98
UBE3C-201ENST00000348165 HELLSQ9NRZ9 838 aa21.18■□□□□ 0.98
UBE3C-201ENST00000348165 PUM3Q15397 648 aaKnown RBP21.18■□□□□ 0.98
UBE3C-201ENST00000348165 KRT79Q5XKE5 535 aa21.18■□□□□ 0.98
UBE3C-201ENST00000348165 GOLGA6L7A0A1B0GV03 622 aa21.18■□□□□ 0.98
UBE3C-201ENST00000348165 KRT2P35908 639 aa21.18■□□□□ 0.98
UBE3C-201ENST00000348165 CCDC186Q7Z3E2 898 aa21.18■□□□□ 0.98
UBE3C-201ENST00000348165 TTC6Q86TZ1 520 aa21.18■□□□□ 0.98
UBE3C-201ENST00000348165 ARMT1Q9H993 441 aa21.18■□□□□ 0.98
UBE3C-201ENST00000348165 RBM17Q96I25 401 aaKnown RBP21.17■□□□□ 0.98
UBE3C-201ENST00000348165 ATP7AQ04656 1500 aa21.17■□□□□ 0.98
UBE3C-201ENST00000348165 RTL1A6NKG5 1358 aa21.17■□□□□ 0.98
UBE3C-201ENST00000348165 SPECC1Q5M775 1068 aa21.17■□□□□ 0.98
UBE3C-201ENST00000348165 FERMT2Q96AC1 680 aa21.17■□□□□ 0.98
UBE3C-201ENST00000348165 PLIN2Q99541 437 aa21.17■□□□□ 0.98
UBE3C-201ENST00000348165 NPC1L1Q9UHC9 1359 aa21.17■□□□□ 0.98
UBE3C-201ENST00000348165 PRDM1O75626 825 aa21.17■□□□□ 0.98
UBE3C-201ENST00000348165 SYT1P21579 422 aa21.16■□□□□ 0.98
UBE3C-201ENST00000348165 GCKRQ14397 625 aa21.16■□□□□ 0.98
UBE3C-201ENST00000348165 FAM227BQ96M60 508 aa21.16■□□□□ 0.98
UBE3C-201ENST00000348165 STX17P56962 302 aa21.16■□□□□ 0.98
UBE3C-201ENST00000348165 SPAG1Q07617 926 aa21.16■□□□□ 0.98
UBE3C-201ENST00000348165 TCHPQ9BT92 498 aa21.16■□□□□ 0.98
UBE3C-201ENST00000348165 GNA11P29992 359 aa21.16■□□□□ 0.98
UBE3C-201ENST00000348165 PLEKHG3A1L390 1219 aa21.15■□□□□ 0.98
UBE3C-201ENST00000348165 HOOK3Q86VS8 718 aa21.15■□□□□ 0.98
UBE3C-201ENST00000348165 GOLGA6L9A6NEM1 432 aa21.15■□□□□ 0.98
UBE3C-201ENST00000348165 CCDC87Q9NVE4 849 aa21.15■□□□□ 0.98
UBE3C-201ENST00000348165 SKILP12757 684 aa21.15■□□□□ 0.98
UBE3C-201ENST00000348165 PTGS1P23219 599 aa21.15■□□□□ 0.98
UBE3C-201ENST00000348165 BCCIPQ9P287 314 aaKnown RBP eCLIP21.15■□□□□ 0.98
UBE3C-201ENST00000348165 CTAGE1Q96RT6 745 aa21.14■□□□□ 0.98
UBE3C-201ENST00000348165 EIF4A1P60842 406 aaKnown RBP21.14■□□□□ 0.98
UBE3C-201ENST00000348165 INTS4Q96HW7 963 aaKnown RBP21.14■□□□□ 0.98
UBE3C-201ENST00000348165 TMEM87AQ8NBN3 555 aa21.14■□□□□ 0.97
UBE3C-201ENST00000348165 DNMT1P26358 1616 aaKnown RBP21.14■□□□□ 0.97
UBE3C-201ENST00000348165 KRT13P13646 458 aa21.13■□□□□ 0.97
UBE3C-201ENST00000348165 TYRO3Q06418 890 aa21.13■□□□□ 0.97
UBE3C-201ENST00000348165 RAB3GAP1Q15042 981 aa21.13■□□□□ 0.97
UBE3C-201ENST00000348165 NAA15Q9BXJ9 866 aaKnown RBP21.13■□□□□ 0.97
UBE3C-201ENST00000348165 TMEM2Q9UHN6 1383 aa21.13■□□□□ 0.97
UBE3C-201ENST00000348165 MCM3P25205 808 aa21.13■□□□□ 0.97
UBE3C-201ENST00000348165 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.13■□□□□ 0.973e-7■□□□□ 10.6
UBE3C-201ENST00000348165 GPAA1O43292 621 aa21.13■□□□□ 0.97
UBE3C-201ENST00000348165 PHACTR2O75167 634 aa21.13■□□□□ 0.97
UBE3C-201ENST00000348165 EIF6P56537 245 aaKnown RBP21.13■□□□□ 0.97
UBE3C-201ENST00000348165 APPBP2Q92624 585 aa21.13■□□□□ 0.97
UBE3C-201ENST00000348165 RNF216Q9NWF9 866 aaPredicted RBP21.13■□□□□ 0.97
UBE3C-201ENST00000348165 NF2P35240 595 aa21.12■□□□□ 0.97
UBE3C-201ENST00000348165 DTHD1Q6ZMT9 781 aa21.12■□□□□ 0.97
UBE3C-201ENST00000348165 GPATCH11Q8N954 259 aa21.12■□□□□ 0.97
UBE3C-201ENST00000348165 TIGD1Q96MW7 591 aa21.12■□□□□ 0.97
UBE3C-201ENST00000348165 PTPRTO14522 1441 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms