RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 WASHC4Q2M389 1173 aa25.13■■□□□ 1.61
PTPN18-202ENST00000347849 AK7Q96M32 723 aa25.13■■□□□ 1.61
PTPN18-202ENST00000347849 PRIMPOLQ96LW4 560 aa25.13■■□□□ 1.61
PTPN18-202ENST00000347849 ZSCAN31Q96LW9 406 aaPredicted RBP25.13■■□□□ 1.61
PTPN18-202ENST00000347849 DSCC1Q9BVC3 393 aa25.13■■□□□ 1.61
PTPN18-202ENST00000347849 ATP6V1DQ9Y5K8 247 aa25.13■■□□□ 1.61
PTPN18-202ENST00000347849 BCL2L12Q9HB09 334 aa25.12■■□□□ 1.61
PTPN18-202ENST00000347849 SH2B1Q9NRF2 756 aaPredicted RBP25.12■■□□□ 1.61
PTPN18-202ENST00000347849 DNM1Q05193 864 aaKnown RBP25.12■■□□□ 1.61
PTPN18-202ENST00000347849 STK3Q13188 491 aa25.12■■□□□ 1.61
PTPN18-202ENST00000347849 ERFEQ4G0M1 354 aa25.12■■□□□ 1.61
PTPN18-202ENST00000347849 PIH1D3Q9NQM4 214 aaKnown RBP25.12■■□□□ 1.61
PTPN18-202ENST00000347849 SPATA31A6Q5VVP1 1343 aa25.12■■□□□ 1.61
PTPN18-202ENST00000347849 LRP5O75197 1615 aa25.12■■□□□ 1.61
PTPN18-202ENST00000347849 DDX60Q8IY21 1712 aaKnown RBP25.12■■□□□ 1.61
PTPN18-202ENST00000347849 SRP68Q9UHB9 627 aaKnown RBP25.11■■□□□ 1.61
PTPN18-202ENST00000347849 PUM3Q15397 648 aaKnown RBP25.11■■□□□ 1.61
PTPN18-202ENST00000347849 MPHOSPH8Q99549 860 aa25.11■■□□□ 1.61
PTPN18-202ENST00000347849 HSPA1LP34931 641 aa25.1■■□□□ 1.61
PTPN18-202ENST00000347849 HMGN5P82970 282 aaKnown RBP25.1■■□□□ 1.61
PTPN18-202ENST00000347849 SPEF2Q9C093 1822 aa25.1■■□□□ 1.61
PTPN18-202ENST00000347849 AKAP11Q9UKA4 1901 aa25.1■■□□□ 1.61
PTPN18-202ENST00000347849 WTIPA6NIX2 430 aaPredicted RBP25.1■■□□□ 1.61
PTPN18-202ENST00000347849 KRT32Q14532 448 aa25.1■■□□□ 1.61
PTPN18-202ENST00000347849 CCDC152Q4G0S7 254 aa25.1■■□□□ 1.61
PTPN18-202ENST00000347849 TBC1D9BQ66K14 1250 aa25.1■■□□□ 1.61
PTPN18-202ENST00000347849 MROH5Q6ZUA9 1318 aa25.1■■□□□ 1.61
PTPN18-202ENST00000347849 Q6ZUG5 572 aa25.09■■□□□ 1.61
PTPN18-202ENST00000347849 LPIN2Q92539 896 aa25.09■■□□□ 1.61
PTPN18-202ENST00000347849 FUCA2Q9BTY2 467 aa25.09■■□□□ 1.61
PTPN18-202ENST00000347849 ALDH8A1Q9H2A2 487 aaPredicted RBP25.09■■□□□ 1.61
PTPN18-202ENST00000347849 AP5Z1O43299 807 aa25.09■■□□□ 1.61
PTPN18-202ENST00000347849 ZNF652Q9Y2D9 606 aa25.09■■□□□ 1.61
PTPN18-202ENST00000347849 CLEC4GQ6UXB4 293 aa25.08■■□□□ 1.61
PTPN18-202ENST00000347849 GJD4Q96KN9 370 aaPredicted RBP25.08■■□□□ 1.61
PTPN18-202ENST00000347849 PRDM4Q9UKN5 801 aa25.08■■□□□ 1.61
PTPN18-202ENST00000347849 ABCC12Q96J65 1359 aa25.08■■□□□ 1.61
PTPN18-202ENST00000347849 CNTNAP4Q9C0A0 1308 aa25.08■■□□□ 1.61
PTPN18-202ENST00000347849 MEX3CQ5U5Q3 659 aaKnown RBP25.08■■□□□ 1.61
PTPN18-202ENST00000347849 TICAM2Q86XR7 235 aa25.08■■□□□ 1.61
PTPN18-202ENST00000347849 APPBP2Q92624 585 aa25.07■■□□□ 1.6
PTPN18-202ENST00000347849 ZNF512BQ96KM6 892 aaPredicted RBP25.07■■□□□ 1.6
PTPN18-202ENST00000347849 CCDC94Q9BW85 323 aaPredicted RBP25.07■■□□□ 1.6
PTPN18-202ENST00000347849 MTMR6Q9Y217 621 aa25.07■■□□□ 1.6
PTPN18-202ENST00000347849 E7EWF7 191 aa25.07■■□□□ 1.6
PTPN18-202ENST00000347849 ARID4AP29374 1257 aaPredicted RBP25.07■■□□□ 1.6
PTPN18-202ENST00000347849 HAND2P61296 217 aa25.07■■□□□ 1.6
PTPN18-202ENST00000347849 CHST3Q7LGC8 479 aa25.07■■□□□ 1.6
PTPN18-202ENST00000347849 CCDC24Q8N4L8 307 aa25.07■■□□□ 1.6
PTPN18-202ENST00000347849 SPTLC3Q9NUV7 552 aa25.07■■□□□ 1.6
PTPN18-202ENST00000347849 THSD7AQ9UPZ6 1657 aa25.07■■□□□ 1.6
PTPN18-202ENST00000347849 IDH1O75874 414 aaKnown RBP25.06■■□□□ 1.6
PTPN18-202ENST00000347849 ANKRD1Q15327 319 aa25.06■■□□□ 1.6
PTPN18-202ENST00000347849 SLC9C2Q5TAH2 1124 aa25.06■■□□□ 1.6
PTPN18-202ENST00000347849 ZNF710Q8N1W2 664 aa25.06■■□□□ 1.6
PTPN18-202ENST00000347849 AFF2P51816 1311 aa25.06■■□□□ 1.6
PTPN18-202ENST00000347849 GNPATO15228 680 aa25.06■■□□□ 1.6
PTPN18-202ENST00000347849 CERKQ8TCT0 537 aa25.06■■□□□ 1.6
PTPN18-202ENST00000347849 CCNL1Q9UK58 526 aaPredicted RBP25.06■■□□□ 1.6
PTPN18-202ENST00000347849 WWC3Q9ULE0 1092 aa25.06■■□□□ 1.6
PTPN18-202ENST00000347849 BTAF1O14981 1849 aa25.05■■□□□ 1.6
PTPN18-202ENST00000347849 VPS37CA5D8V6 355 aaPredicted RBP25.05■■□□□ 1.6
PTPN18-202ENST00000347849 ZFYP08048 801 aaPredicted RBP25.05■■□□□ 1.6
PTPN18-202ENST00000347849 SPC24Q8NBT2 197 aa25.05■■□□□ 1.6
PTPN18-202ENST00000347849 BRF1Q92994 677 aa25.05■■□□□ 1.6
PTPN18-202ENST00000347849 BCORQ6W2J9 1755 aa25.05■■□□□ 1.6
PTPN18-202ENST00000347849 GPAA1O43292 621 aa25.05■■□□□ 1.6
PTPN18-202ENST00000347849 FGAP02671 866 aa25.05■■□□□ 1.6
PTPN18-202ENST00000347849 ADD2P35612 726 aa25.05■■□□□ 1.6
PTPN18-202ENST00000347849 RASGRF1Q13972 1273 aa25.05■■□□□ 1.6
PTPN18-202ENST00000347849 PRDM10Q9NQV6 1147 aa25.05■■□□□ 1.6
PTPN18-202ENST00000347849 IGHMBP2P38935 993 aaKnown RBP25.04■■□□□ 1.6
PTPN18-202ENST00000347849 BCAMP50895 628 aa25.04■■□□□ 1.6
PTPN18-202ENST00000347849 CHRNDQ07001 517 aa25.04■■□□□ 1.6
PTPN18-202ENST00000347849 GTF2F1P35269 517 aaKnown RBP eCLIP25.04■■□□□ 1.6
PTPN18-202ENST00000347849 SMAP1Q8IYB5 467 aaPredicted RBP25.04■■□□□ 1.6
PTPN18-202ENST00000347849 KIF3AQ9Y496 699 aa25.04■■□□□ 1.6
PTPN18-202ENST00000347849 MYO5AQ9Y4I1 1855 aaKnown RBP25.03■■□□□ 1.6
PTPN18-202ENST00000347849 RPS6KA4O75676 772 aa25.03■■□□□ 1.6
PTPN18-202ENST00000347849 SLC5A1P13866 664 aa25.03■■□□□ 1.6
PTPN18-202ENST00000347849 EXOSC10Q01780 885 aaKnown RBP25.03■■□□□ 1.6
PTPN18-202ENST00000347849 DHX32Q7L7V1 743 aaKnown RBP25.03■■□□□ 1.6
PTPN18-202ENST00000347849 RTL9Q8NET4 1388 aa25.03■■□□□ 1.6
PTPN18-202ENST00000347849 ZNF831Q5JPB2 1677 aa25.03■■□□□ 1.6
PTPN18-202ENST00000347849 JAK2O60674 1132 aa25.02■■□□□ 1.6
PTPN18-202ENST00000347849 SPATA5Q8NB90 893 aa25.02■■□□□ 1.6
PTPN18-202ENST00000347849 KCNF1Q9H3M0 494 aa25.02■■□□□ 1.6
PTPN18-202ENST00000347849 ZNF532Q9HCE3 1301 aa25.02■■□□□ 1.6
PTPN18-202ENST00000347849 LRRFIP1Q32MZ4 808 aaKnown RBP25.02■■□□□ 1.6
PTPN18-202ENST00000347849 KIAA1524Q8TCG1 905 aa25.02■■□□□ 1.6
PTPN18-202ENST00000347849 NARFQ9UHQ1 456 aa25.02■■□□□ 1.6
PTPN18-202ENST00000347849 PYCARDQ9ULZ3 195 aa25.02■■□□□ 1.6
PTPN18-202ENST00000347849 TAF1P21675 1872 aa25.02■■□□□ 1.6
PTPN18-202ENST00000347849 GPHNQ9NQX3 736 aaPredicted RBP25.01■■□□□ 1.59
PTPN18-202ENST00000347849 UQCRFS1P1P0C7P4 283 aa25.01■■□□□ 1.59
PTPN18-202ENST00000347849 PDE6AP16499 860 aa25.01■■□□□ 1.59
PTPN18-202ENST00000347849 RC3H1Q5TC82 1133 aaKnown RBP25.01■■□□□ 1.59
PTPN18-202ENST00000347849 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.01■■□□□ 1.598e-7■■■■■ 37.5
PTPN18-202ENST00000347849 IQSEC3Q9UPP2 1182 aaPredicted RBP25.01■■□□□ 1.59
PTPN18-202ENST00000347849 CCDC192P0DO97 292 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms