RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 BCAMP50895 628 aa16.74■□□□□ 0.27
CDK5RAP1-202ENST00000346416 IMMTQ16891 758 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP1-202ENST00000346416 ARHGEF1Q92888 912 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP1-202ENST00000346416 NYXQ9GZU5 481 aa16.74■□□□□ 0.27
CDK5RAP1-202ENST00000346416 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
CDK5RAP1-202ENST00000346416 MTMR6Q9Y217 621 aa16.74■□□□□ 0.27
CDK5RAP1-202ENST00000346416 TCHHQ07283 1943 aa16.74■□□□□ 0.27
CDK5RAP1-202ENST00000346416 ZNF532Q9HCE3 1301 aa16.74■□□□□ 0.27
CDK5RAP1-202ENST00000346416 TAF1P21675 1872 aa16.74■□□□□ 0.27
CDK5RAP1-202ENST00000346416 CAVIN1Q6NZI2 390 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP1-202ENST00000346416 NBPF5PQ86XG9 351 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP1-202ENST00000346416 GTF3C6Q969F1 213 aa16.73■□□□□ 0.27
CDK5RAP1-202ENST00000346416 HAND2P61296 217 aa16.73■□□□□ 0.27
CDK5RAP1-202ENST00000346416 LARP1BQ659C4 914 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP1-202ENST00000346416 BSDC1Q9NW68 430 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP1-202ENST00000346416 ISY1Q9ULR0 285 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP1-202ENST00000346416 CASZ1Q86V15 1759 aa16.73■□□□□ 0.27
CDK5RAP1-202ENST00000346416 TCRBV5S4A2TA0A5A2 114 aa16.72■□□□□ 0.27
CDK5RAP1-202ENST00000346416 AGXT2Q9BYV1 514 aa16.72■□□□□ 0.27
CDK5RAP1-202ENST00000346416 GDPD2Q9HCC8 539 aa16.72■□□□□ 0.27
CDK5RAP1-202ENST00000346416 ATP6V1DQ9Y5K8 247 aa16.72■□□□□ 0.27
CDK5RAP1-202ENST00000346416 VPS37CA5D8V6 355 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP1-202ENST00000346416 XRCC6P12956 609 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDK5RAP1-202ENST00000346416 GAS2L3Q86XJ1 694 aa16.72■□□□□ 0.27
CDK5RAP1-202ENST00000346416 PDIA4P13667 645 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP1-202ENST00000346416 PDCP20941 246 aa16.71■□□□□ 0.27
CDK5RAP1-202ENST00000346416 MAP3K12Q12852 859 aa16.71■□□□□ 0.27
CDK5RAP1-202ENST00000346416 TPTE2Q6XPS3 522 aa16.71■□□□□ 0.27
CDK5RAP1-202ENST00000346416 CHST3Q7LGC8 479 aa16.71■□□□□ 0.27
CDK5RAP1-202ENST00000346416 CELF1Q92879 486 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP1-202ENST00000346416 NLRP3Q96P20 1036 aa16.71■□□□□ 0.27
CDK5RAP1-202ENST00000346416 BCL11BQ9C0K0 894 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP1-202ENST00000346416 QTRT2Q9H974 415 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP1-202ENST00000346416 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
CDK5RAP1-202ENST00000346416 NSFL1CQ9UNZ2 370 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP1-202ENST00000346416 COL24A1Q17RW2 1714 aa16.71■□□□□ 0.26
CDK5RAP1-202ENST00000346416 ZNF213O14771 459 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 PHF14O94880 888 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 RFC4P35249 363 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 USP48Q86UV5 1035 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 MINPP1Q9UNW1 487 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 C4BP0C0L5 1744 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 WTIPA6NIX2 430 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 MBD3O95983 291 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 MRE11P49959 708 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 APOBRQ0VD83 1088 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 SCRN1Q12765 414 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 TRAPPC3LQ5T215 181 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 FAM196AQ6ZSG2 479 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 CCDC24Q8N4L8 307 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 MAGEB6Q8N7X4 407 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 AIDAQ96BJ3 306 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 CNPY2Q9Y2B0 182 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 DOCK2Q92608 1830 aa16.7■□□□□ 0.26
CDK5RAP1-202ENST00000346416 JAK2O60674 1132 aa16.69■□□□□ 0.26
CDK5RAP1-202ENST00000346416 PFKFB2O60825 505 aa16.69■□□□□ 0.26
CDK5RAP1-202ENST00000346416 UBE4AQ14139 1066 aa16.69■□□□□ 0.26
CDK5RAP1-202ENST00000346416 ZSCAN23Q3MJ62 389 aa16.69■□□□□ 0.26
CDK5RAP1-202ENST00000346416 STRBPQ96SI9 672 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP1-202ENST00000346416 GRPEL1Q9HAV7 217 aa16.69■□□□□ 0.26
CDK5RAP1-202ENST00000346416 LRRC4BQ9NT99 713 aa16.69■□□□□ 0.26
CDK5RAP1-202ENST00000346416 APPP05067 770 aa16.69■□□□□ 0.26
CDK5RAP1-202ENST00000346416 RBM27Q9P2N5 1060 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP1-202ENST00000346416 A0A1B0GUL6 1792 aa16.68■□□□□ 0.26
CDK5RAP1-202ENST00000346416 GYG1P46976 350 aa16.68■□□□□ 0.26
CDK5RAP1-202ENST00000346416 RPS8P62241 208 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP1-202ENST00000346416 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP1-202ENST00000346416 CDC37L1Q7L3B6 337 aa16.68■□□□□ 0.26
CDK5RAP1-202ENST00000346416 TMEM87AQ8NBN3 555 aa16.68■□□□□ 0.26
CDK5RAP1-202ENST00000346416 IQSEC3Q9UPP2 1182 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP1-202ENST00000346416 ZNF804BA4D1E1 1349 aa16.68■□□□□ 0.26
CDK5RAP1-202ENST00000346416 C4AP0C0L4 1744 aa16.68■□□□□ 0.26
CDK5RAP1-202ENST00000346416 GADD45BO75293 160 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP1-202ENST00000346416 FBXL16Q8N461 479 aa16.67■□□□□ 0.26
CDK5RAP1-202ENST00000346416 NCOA7Q8NI08 942 aa16.67■□□□□ 0.26
CDK5RAP1-202ENST00000346416 TMEM63CQ9P1W3 806 aa16.67■□□□□ 0.26
CDK5RAP1-202ENST00000346416 MCM5P33992 734 aa16.67■□□□□ 0.26
CDK5RAP1-202ENST00000346416 ZNF445P59923 1031 aa16.67■□□□□ 0.26
CDK5RAP1-202ENST00000346416 MB21D2Q8IYB1 491 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP1-202ENST00000346416 LLPHQ9BRT6 129 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP1-202ENST00000346416 NPHP1O15259 732 aa16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 MBD4O95243 580 aa16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 DNM1Q05193 864 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 RALYLQ86SE5 291 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 ZNF274Q96GC6 653 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 NBPF3Q9H094 633 aa16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 GNL3LQ9NVN8 582 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 LRP2BPQ9P2M1 347 aa16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 NAP1L2Q9ULW6 460 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 PRC1O43663 620 aa16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 PDIA3P30101 505 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 CCT2P78371 535 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 CAVIN4Q5BKX8 364 aa16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 FERMT3Q86UX7 667 aa16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 DDX11Q96FC9 970 aa16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 PANK2Q9BZ23 570 aa16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 GPHNQ9NQX3 736 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP1-202ENST00000346416 FIBPO43427 364 aa16.65■□□□□ 0.26
CDK5RAP1-202ENST00000346416 EVCP57679 992 aa16.65■□□□□ 0.26
CDK5RAP1-202ENST00000346416 NSUN7Q8NE18 718 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms