RNA–Protein interactions for RNA: ENST00000345425.6

GIPC1-201, Transcript of GIPC PDZ domain containing family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIPC1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIPC1-201ENST00000345425 PDS5AQ29RF7 1337 aaKnown RBP33.86■■■■□ 3.01
GIPC1-201ENST00000345425 SPATA5Q8NB90 893 aa33.85■■■■□ 3.01
GIPC1-201ENST00000345425 COL4A5P29400 1685 aa33.85■■■■□ 3.01
GIPC1-201ENST00000345425 DICER1Q9UPY3 1922 aaKnown RBP33.85■■■■□ 3.01
GIPC1-201ENST00000345425 SCARF1Q14162 830 aa33.85■■■■□ 3.01
GIPC1-201ENST00000345425 HMG20BQ9P0W2 317 aa33.85■■■■□ 3.01
GIPC1-201ENST00000345425 ZNRF3Q9ULT6 936 aa33.85■■■■□ 3.01
GIPC1-201ENST00000345425 AKAP11Q9UKA4 1901 aa33.85■■■■□ 3.01
GIPC1-201ENST00000345425 HAUS7Q99871 368 aa33.84■■■■□ 3.01
GIPC1-201ENST00000345425 DNAJC2Q99543 621 aaKnown RBP33.82■■■■□ 3
GIPC1-201ENST00000345425 COL1A1P02452 1464 aaPredicted RBP33.81■■■■□ 3
GIPC1-201ENST00000345425 CHAF1AQ13111 956 aaPredicted RBP33.81■■■■□ 3
GIPC1-201ENST00000345425 PI16Q6UXB8 463 aa33.81■■■■□ 3
GIPC1-201ENST00000345425 SNRKQ9NRH2 765 aa33.81■■■■□ 3
GIPC1-201ENST00000345425 YDJCA8MPS7 323 aa33.8■■■■□ 3
GIPC1-201ENST00000345425 TTC22Q5TAA0 569 aa33.8■■■■□ 3
GIPC1-201ENST00000345425 WDR66Q8TBY9 1149 aa33.8■■■■□ 3
GIPC1-201ENST00000345425 RNF181Q9P0P0 153 aa33.8■■■■□ 3
GIPC1-201ENST00000345425 FAM205AQ6ZU69 1335 aa33.8■■■■□ 3
GIPC1-201ENST00000345425 ZAP70P43403 619 aa33.8■■■■□ 3
GIPC1-201ENST00000345425 GTF2IP78347 998 aa33.8■■■■□ 3
GIPC1-201ENST00000345425 TTLL5Q6EMB2 1281 aa33.8■■■■□ 3
GIPC1-201ENST00000345425 SCN9AQ15858 1988 aa33.79■■■■□ 3
GIPC1-201ENST00000345425 STRIP1Q5VSL9 837 aa33.78■■■■□ 3
GIPC1-201ENST00000345425 TBC1D22AQ8WUA7 517 aa33.78■■■■□ 3
GIPC1-201ENST00000345425 FBXW7Q969H0 707 aa33.78■■■■□ 3
GIPC1-201ENST00000345425 PAG1Q9NWQ8 432 aa33.78■■■■□ 3
GIPC1-201ENST00000345425 USP17L3A6NCW0 530 aa33.77■■■■□ 3
GIPC1-201ENST00000345425 USP17L4A6NCW7 530 aa33.77■■■■□ 3
GIPC1-201ENST00000345425 TTF1Q15361 905 aaPredicted RBP33.77■■■■□ 3
GIPC1-201ENST00000345425 C9orf131Q5VYM1 1079 aa33.77■■■■□ 3
GIPC1-201ENST00000345425 USP17L1Q7RTZ2 530 aa33.77■■■■□ 3
GIPC1-201ENST00000345425 NDUFB9Q9Y6M9 179 aa33.77■■■■□ 3
GIPC1-201ENST00000345425 PSME4Q14997 1843 aa33.77■■■■□ 3
GIPC1-201ENST00000345425 FZD9O00144 591 aa33.77■■■■□ 3
GIPC1-201ENST00000345425 ZGPATQ8N5A5 531 aaKnown RBP33.77■■■■□ 3
GIPC1-201ENST00000345425 UTRNP46939 3433 aa33.76■■■■□ 3
GIPC1-201ENST00000345425 EIF6P56537 245 aaKnown RBP33.76■■■■□ 3
GIPC1-201ENST00000345425 KCNQ5Q9NR82 932 aa33.76■■■■□ 3
GIPC1-201ENST00000345425 JAG2Q9Y219 1238 aa33.76■■■■□ 3
GIPC1-201ENST00000345425 SALL1Q9NSC2 1324 aa33.76■■■□□ 2.99
GIPC1-201ENST00000345425 GOLIM4O00461 696 aa33.75■■■□□ 2.99
GIPC1-201ENST00000345425 CYP2E1P05181 493 aaPredicted RBP33.75■■■□□ 2.99
GIPC1-201ENST00000345425 TIAM2Q8IVF5 1701 aa33.75■■■□□ 2.99
GIPC1-201ENST00000345425 TRIM6-TRIM34B2RNG4 842 aa33.74■■■□□ 2.99
GIPC1-201ENST00000345425 GSPT1P15170 499 aaKnown RBP33.74■■■□□ 2.99
GIPC1-201ENST00000345425 CNTROBQ8N137 903 aa33.74■■■□□ 2.99
GIPC1-201ENST00000345425 RAD17O75943 681 aa33.73■■■□□ 2.99
GIPC1-201ENST00000345425 MAP4K4O95819 1239 aaPredicted RBP33.73■■■□□ 2.99
GIPC1-201ENST00000345425 FKBP1AP62942 108 aaKnown RBP33.73■■■□□ 2.99
GIPC1-201ENST00000345425 MFSD14BQ5SR56 506 aa33.73■■■□□ 2.99
GIPC1-201ENST00000345425 CIAPIN1Q6FI81 312 aa33.73■■■□□ 2.99
GIPC1-201ENST00000345425 EVI5LQ96CN4 794 aa33.73■■■□□ 2.99
GIPC1-201ENST00000345425 CXCL9Q07325 125 aa33.72■■■□□ 2.99
GIPC1-201ENST00000345425 TNIP1Q15025 636 aa33.72■■■□□ 2.99
GIPC1-201ENST00000345425 BMP2KLQ5H9B9 411 aa33.72■■■□□ 2.99
GIPC1-201ENST00000345425 DACT2Q5SW24 774 aa33.72■■■□□ 2.99
GIPC1-201ENST00000345425 EDC3Q96F86 508 aaKnown RBP33.72■■■□□ 2.99
GIPC1-201ENST00000345425 ANTXR1Q9H6X2 564 aa33.72■■■□□ 2.99
GIPC1-201ENST00000345425 ABCF2Q9UG63 623 aa33.72■■■□□ 2.99
GIPC1-201ENST00000345425 SPTY2D1Q68D10 685 aaPredicted RBP33.71■■■□□ 2.99
GIPC1-201ENST00000345425 ZC3H4Q9UPT8 1303 aaKnown RBP33.71■■■□□ 2.99
GIPC1-201ENST00000345425 ZNF646O15015 1829 aaPredicted RBP33.71■■■□□ 2.99
GIPC1-201ENST00000345425 PSMD14O00487 310 aa33.7■■■□□ 2.99
GIPC1-201ENST00000345425 TBC1D9Q6ZT07 1266 aa33.7■■■□□ 2.99
GIPC1-201ENST00000345425 RILPL2Q969X0 211 aa33.7■■■□□ 2.99
GIPC1-201ENST00000345425 MYO3BQ8WXR4 1341 aa33.7■■■□□ 2.98
GIPC1-201ENST00000345425 VIL1P09327 827 aaKnown RBP33.7■■■□□ 2.98
GIPC1-201ENST00000345425 LRP2BPQ9P2M1 347 aa33.7■■■□□ 2.98
GIPC1-201ENST00000345425 SUGT1Q9Y2Z0 365 aa33.7■■■□□ 2.98
GIPC1-201ENST00000345425 KBTBD3Q8NAB2 608 aa33.69■■■□□ 2.98
GIPC1-201ENST00000345425 PIH1D3Q9NQM4 214 aaKnown RBP33.69■■■□□ 2.98
GIPC1-201ENST00000345425 AK9Q5TCS8 1911 aa33.68■■■□□ 2.98
GIPC1-201ENST00000345425 IGSF3O75054 1194 aa33.68■■■□□ 2.98
GIPC1-201ENST00000345425 ERICH6Q7L0X2 663 aa33.68■■■□□ 2.98
GIPC1-201ENST00000345425 DOCK2Q92608 1830 aa33.68■■■□□ 2.98
GIPC1-201ENST00000345425 SDSP20132 328 aa33.67■■■□□ 2.98
GIPC1-201ENST00000345425 RSBN1LQ6PCB5 846 aaPredicted RBP33.67■■■□□ 2.98
GIPC1-201ENST00000345425 LDHBP07195 334 aaKnown RBP33.67■■■□□ 2.98
GIPC1-201ENST00000345425 FSD1Q9BTV5 496 aa33.67■■■□□ 2.98
GIPC1-201ENST00000345425 ZNF541Q9H0D2 1346 aa33.66■■■□□ 2.98
GIPC1-201ENST00000345425 IDH1O75874 414 aaKnown RBP33.66■■■□□ 2.98
GIPC1-201ENST00000345425 MAP3K12Q12852 859 aa33.66■■■□□ 2.98
GIPC1-201ENST00000345425 LRRFIP1Q32MZ4 808 aaKnown RBP33.66■■■□□ 2.98
GIPC1-201ENST00000345425 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.66■■■□□ 2.98
GIPC1-201ENST00000345425 CERS5Q8N5B7 392 aa33.65■■■□□ 2.98
GIPC1-201ENST00000345425 RAI14Q9P0K7 980 aa33.65■■■□□ 2.98
GIPC1-201ENST00000345425 PRDX5P30044 214 aa33.65■■■□□ 2.98
GIPC1-201ENST00000345425 TICAM2Q86XR7 235 aa33.65■■■□□ 2.98
GIPC1-201ENST00000345425 AGBL3Q8NEM8 1001 aa33.65■■■□□ 2.98
GIPC1-201ENST00000345425 MXD3Q9BW11 206 aa33.65■■■□□ 2.98
GIPC1-201ENST00000345425 MYO5AQ9Y4I1 1855 aaKnown RBP33.64■■■□□ 2.98
GIPC1-201ENST00000345425 GPC2Q8N158 579 aa33.63■■■□□ 2.97
GIPC1-201ENST00000345425 RPS12P25398 132 aaKnown RBP33.62■■■□□ 2.97
GIPC1-201ENST00000345425 ZSCAN25Q6NSZ9 544 aa33.62■■■□□ 2.97
GIPC1-201ENST00000345425 DZIP1Q86YF9 867 aaKnown RBP33.62■■■□□ 2.97
GIPC1-201ENST00000345425 GJA3Q9Y6H8 435 aa33.62■■■□□ 2.97
GIPC1-201ENST00000345425 MAST3O60307 1309 aa33.62■■■□□ 2.97
GIPC1-201ENST00000345425 TMED8Q6PL24 325 aaPredicted RBP33.62■■■□□ 2.97
GIPC1-201ENST00000345425 RFX7Q2KHR2 1363 aa33.62■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms