RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 TRPM4Q8TD43 1214 aa16.16■□□□□ 0.18
HLA-DQA1-201ENST00000343139 GNL3LQ9NVN8 582 aaKnown RBP16.16■□□□□ 0.18
HLA-DQA1-201ENST00000343139 CLEC11AQ9Y240 323 aa16.16■□□□□ 0.18
HLA-DQA1-201ENST00000343139 A0A1B0GUL7 405 aa16.15■□□□□ 0.18
HLA-DQA1-201ENST00000343139 SHTN1A0MZ66 631 aa16.15■□□□□ 0.18
HLA-DQA1-201ENST00000343139 ITGBL1O95965 494 aaPredicted RBP16.15■□□□□ 0.18
HLA-DQA1-201ENST00000343139 AAMPQ13685 434 aa16.15■□□□□ 0.18
HLA-DQA1-201ENST00000343139 KIF4BQ2VIQ3 1234 aa16.15■□□□□ 0.18
HLA-DQA1-201ENST00000343139 SIRT2Q8IXJ6 389 aa16.15■□□□□ 0.18
HLA-DQA1-201ENST00000343139 CERS5Q8N5B7 392 aa16.15■□□□□ 0.18
HLA-DQA1-201ENST00000343139 FBXW7Q969H0 707 aa16.15■□□□□ 0.18
HLA-DQA1-201ENST00000343139 MYOZ2Q9NPC6 264 aa16.15■□□□□ 0.18
HLA-DQA1-201ENST00000343139 HDAC9Q9UKV0 1011 aa16.15■□□□□ 0.18
HLA-DQA1-201ENST00000343139 SUGT1Q9Y2Z0 365 aa16.15■□□□□ 0.18
HLA-DQA1-201ENST00000343139 SAMD7Q7Z3H4 446 aa16.14■□□□□ 0.17
HLA-DQA1-201ENST00000343139 CNTROBQ8N137 903 aa16.14■□□□□ 0.17
HLA-DQA1-201ENST00000343139 MTMR14Q8NCE2 650 aa16.14■□□□□ 0.17
HLA-DQA1-201ENST00000343139 PDS5AQ29RF7 1337 aaKnown RBP16.14■□□□□ 0.17
HLA-DQA1-201ENST00000343139 PASKQ96RG2 1323 aa16.14■□□□□ 0.17
HLA-DQA1-201ENST00000343139 ZNF646O15015 1829 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQA1-201ENST00000343139 FRAT2O75474 233 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 APLP1P51693 650 aa16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 TIMM10P62072 90 aa16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 OS9Q13438 667 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 TBC1D10BQ4KMP7 808 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 MFSD14BQ5SR56 506 aa16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 CCDC102BQ68D86 513 aa16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 XAGE2Q96GT9 111 aa16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 MXD3Q9BW11 206 aa16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 EGFRP00533 1210 aa16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 KIAA0825Q8IV33 1275 aa16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 WDR66Q8TBY9 1149 aa16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 MRIQ9BWK5 157 aa16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 DENND2AQ9ULE3 1009 aa16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQA1-201ENST00000343139 PITPNM2Q9BZ72 1349 aa16.12■□□□□ 0.17
HLA-DQA1-201ENST00000343139 RAB11FIP3O75154 756 aa16.12■□□□□ 0.17
HLA-DQA1-201ENST00000343139 TNNI3KQ59H18 835 aa16.12■□□□□ 0.17
HLA-DQA1-201ENST00000343139 MAP1SQ66K74 1059 aaPredicted RBP16.12■□□□□ 0.17
HLA-DQA1-201ENST00000343139 ZBED3Q96IU2 234 aaPredicted RBP16.12■□□□□ 0.17
HLA-DQA1-201ENST00000343139 FPGT-TNNI3KV9GXZ4 949 aa16.12■□□□□ 0.17
HLA-DQA1-201ENST00000343139 SALL1Q9NSC2 1324 aa16.12■□□□□ 0.17
HLA-DQA1-201ENST00000343139 ADORA1P30542 326 aa16.11■□□□□ 0.17
HLA-DQA1-201ENST00000343139 PHKA1P46020 1223 aa16.11■□□□□ 0.17
HLA-DQA1-201ENST00000343139 HDLBPQ00341 1268 aaKnown RBP16.11■□□□□ 0.17
HLA-DQA1-201ENST00000343139 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
HLA-DQA1-201ENST00000343139 SERPINA10Q9UK55 444 aa16.11■□□□□ 0.17
HLA-DQA1-201ENST00000343139 ZNF512BQ96KM6 892 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQA1-201ENST00000343139 NEUROD6Q96NK8 337 aa16.1■□□□□ 0.17
HLA-DQA1-201ENST00000343139 IQSEC3Q9UPP2 1182 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQA1-201ENST00000343139 ARAP2Q8WZ64 1704 aa16.1■□□□□ 0.17
HLA-DQA1-201ENST00000343139 MAST3O60307 1309 aa16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 WNT10BO00744 389 aa16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 ARID4AP29374 1257 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 SCARF1Q14162 830 aa16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 RBM26Q5T8P6 1007 aaKnown RBP16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 DCPSQ96C86 337 aaKnown RBP16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 KIF1BPQ96EK5 621 aa16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 EXOC6BQ9Y2D4 811 aa16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 UQCRFS1P1P0C7P4 283 aa16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 CHAF1AQ13111 956 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 GORABQ5T7V8 394 aa16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 ZGPATQ8N5A5 531 aaKnown RBP16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 RHPN1Q8TCX5 695 aa16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 JAG2Q9Y219 1238 aa16.09■□□□□ 0.17
HLA-DQA1-201ENST00000343139 IGSF3O75054 1194 aa16.08■□□□□ 0.16
HLA-DQA1-201ENST00000343139 RASGRF1Q13972 1273 aa16.08■□□□□ 0.16
HLA-DQA1-201ENST00000343139 DLGAP5Q15398 846 aa16.08■□□□□ 0.16
HLA-DQA1-201ENST00000343139 CREBZFQ9NS37 354 aa16.08■□□□□ 0.16
HLA-DQA1-201ENST00000343139 GGA3Q9NZ52 723 aa16.08■□□□□ 0.16
HLA-DQA1-201ENST00000343139 TTF2Q9UNY4 1162 aaKnown RBP16.08■□□□□ 0.16
HLA-DQA1-201ENST00000343139 COL1A1P02452 1464 aaPredicted RBP16.07■□□□□ 0.16
HLA-DQA1-201ENST00000343139 SPDYE2BA6NHP3 402 aa16.07■□□□□ 0.16
HLA-DQA1-201ENST00000343139 SPDYE6P0CI01 402 aa16.07■□□□□ 0.16
HLA-DQA1-201ENST00000343139 NBPF9Q3BBW0 867 aa16.07■□□□□ 0.16
HLA-DQA1-201ENST00000343139 CCDC158Q5M9N0 1113 aa16.07■□□□□ 0.16
HLA-DQA1-201ENST00000343139 KRT26Q7Z3Y9 468 aa16.07■□□□□ 0.16
HLA-DQA1-201ENST00000343139 EAF2Q96CJ1 260 aaPredicted RBP16.07■□□□□ 0.16
HLA-DQA1-201ENST00000343139 CRBNQ96SW2 442 aa16.07■□□□□ 0.16
HLA-DQA1-201ENST00000343139 CENPBP07199 599 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQA1-201ENST00000343139 CFAP100Q494V2 611 aa16.06■□□□□ 0.16
HLA-DQA1-201ENST00000343139 ANGEL2Q5VTE6 544 aaKnown RBP16.06■□□□□ 0.16
HLA-DQA1-201ENST00000343139 SULF1Q8IWU6 871 aa16.06■□□□□ 0.16
HLA-DQA1-201ENST00000343139 CLASRPQ8N2M8 674 aaKnown RBP16.06■□□□□ 0.16
HLA-DQA1-201ENST00000343139 DCTPP1Q9H773 170 aa16.06■□□□□ 0.16
HLA-DQA1-201ENST00000343139 TMEM88BA6NKF7 163 aa16.05■□□□□ 0.16
HLA-DQA1-201ENST00000343139 F8W031 263 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQA1-201ENST00000343139 MYO1BO43795 1136 aa16.05■□□□□ 0.16
HLA-DQA1-201ENST00000343139 HHIPL2Q6UWX4 724 aa16.05■□□□□ 0.16
HLA-DQA1-201ENST00000343139 DBNDD2Q9BQY9 259 aa16.05■□□□□ 0.16
HLA-DQA1-201ENST00000343139 GLIS2Q9BZE0 524 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQA1-201ENST00000343139 DBNLQ9UJU6 430 aaKnown RBP16.05■□□□□ 0.16
HLA-DQA1-201ENST00000343139 SUPT16HQ9Y5B9 1047 aaKnown RBP16.05■□□□□ 0.16
HLA-DQA1-201ENST00000343139 PCDHB15Q9Y5E8 787 aa16.05■□□□□ 0.16
HLA-DQA1-201ENST00000343139 CRKP46108 304 aa16.04■□□□□ 0.16
HLA-DQA1-201ENST00000343139 SPTY2D1Q68D10 685 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQA1-201ENST00000343139 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
HLA-DQA1-201ENST00000343139 APOBEC3FQ8IUX4 373 aaKnown RBP16.04■□□□□ 0.16
HLA-DQA1-201ENST00000343139 SPATA5Q8NB90 893 aa16.04■□□□□ 0.16
HLA-DQA1-201ENST00000343139 TEKT1Q969V4 418 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms