RNA–Protein interactions for RNA: ENST00000341369.11

PTMA-201, Transcript of prothymosin alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTMA, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-201ENST00000341369 TRIM17Q9Y577 477 aa13□□□□□ -0.33
PTMA-201ENST00000341369 MYO3BQ8WXR4 1341 aa12.99□□□□□ -0.33
PTMA-201ENST00000341369 MANSC4A6NHS7 340 aaPredicted RBP12.99□□□□□ -0.33
PTMA-201ENST00000341369 HOXB7P09629 217 aa12.99□□□□□ -0.33
PTMA-201ENST00000341369 ATP2B4P23634 1241 aa12.99□□□□□ -0.33
PTMA-201ENST00000341369 ZBTB38Q8NAP3 1195 aaPredicted RBP12.99□□□□□ -0.33
PTMA-201ENST00000341369 SEC31BQ9NQW1 1179 aa12.99□□□□□ -0.33
PTMA-201ENST00000341369 WNT10BO00744 389 aa12.98□□□□□ -0.33
PTMA-201ENST00000341369 PTPN12Q05209 780 aaKnown RBP12.98□□□□□ -0.33
PTMA-201ENST00000341369 SPRYD7Q5W111 196 aa12.98□□□□□ -0.33
PTMA-201ENST00000341369 OTOP1Q7RTM1 612 aa12.98□□□□□ -0.33
PTMA-201ENST00000341369 APOBEC3FQ8IUX4 373 aaKnown RBP12.98□□□□□ -0.33
PTMA-201ENST00000341369 R3HDMLQ9H3Y0 253 aa12.98□□□□□ -0.33
PTMA-201ENST00000341369 COL4A1P02462 1669 aa12.97□□□□□ -0.33
PTMA-201ENST00000341369 CHL1O00533 1208 aa12.97□□□□□ -0.33
PTMA-201ENST00000341369 FXR1P51114 621 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTMA-201ENST00000341369 PRKG1Q13976 671 aa12.97□□□□□ -0.33
PTMA-201ENST00000341369 LDLRAD1Q5T700 205 aa12.97□□□□□ -0.33
PTMA-201ENST00000341369 RIC3Q7Z5B4 369 aa12.97□□□□□ -0.33
PTMA-201ENST00000341369 ANKRD18AQ8IVF6 992 aa12.97□□□□□ -0.33
PTMA-201ENST00000341369 SLC10A4Q96EP9 437 aa12.97□□□□□ -0.33
PTMA-201ENST00000341369 ERO1AQ96HE7 468 aa12.97□□□□□ -0.33
PTMA-201ENST00000341369 PDE8AO60658 829 aa12.96□□□□□ -0.33
PTMA-201ENST00000341369 ZBTB48P10074 688 aaPredicted RBP12.96□□□□□ -0.33
PTMA-201ENST00000341369 TMPOP42166 694 aaKnown RBP12.96□□□□□ -0.33
PTMA-201ENST00000341369 KRT24Q2M2I5 525 aa12.96□□□□□ -0.33
PTMA-201ENST00000341369 DACT2Q5SW24 774 aa12.96□□□□□ -0.33
PTMA-201ENST00000341369 STRIP1Q5VSL9 837 aa12.96□□□□□ -0.33
PTMA-201ENST00000341369 OTUD7BQ6GQQ9 843 aa12.96□□□□□ -0.33
PTMA-201ENST00000341369 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
PTMA-201ENST00000341369 ANGEL1Q9UNK9 670 aaKnown RBP12.96□□□□□ -0.33
PTMA-201ENST00000341369 PTPN22Q9Y2R2 807 aa12.96□□□□□ -0.33
PTMA-201ENST00000341369 LAS1LQ9Y4W2 734 aaKnown RBP12.96□□□□□ -0.33
PTMA-201ENST00000341369 PSME4Q14997 1843 aa12.96□□□□□ -0.33
PTMA-201ENST00000341369 FBXW7Q969H0 707 aa12.95□□□□□ -0.34
PTMA-201ENST00000341369 ARMC5Q96C12 935 aa12.95□□□□□ -0.34
PTMA-201ENST00000341369 CDC5LQ99459 802 aaKnown RBP12.95□□□□□ -0.34
PTMA-201ENST00000341369 FBXO3Q9UK99 471 aa12.95□□□□□ -0.34
PTMA-201ENST00000341369 MED23Q9ULK4 1368 aa12.94□□□□□ -0.34
PTMA-201ENST00000341369 UNCXA6NJT0 531 aa12.94□□□□□ -0.34
PTMA-201ENST00000341369 PPP1R12BO60237 982 aaPredicted RBP12.94□□□□□ -0.34
PTMA-201ENST00000341369 SASH1O94885 1247 aa12.94□□□□□ -0.34
PTMA-201ENST00000341369 PCCAP05165 728 aaPredicted RBP12.94□□□□□ -0.34
PTMA-201ENST00000341369 CCDC191Q8NCU4 936 aa12.94□□□□□ -0.34
PTMA-201ENST00000341369 CCDC85AQ96PX6 553 aaPredicted RBP12.94□□□□□ -0.34
PTMA-201ENST00000341369 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
PTMA-201ENST00000341369 EFCC1Q9HA90 598 aa12.94□□□□□ -0.34
PTMA-201ENST00000341369 MKI67P46013 3256 aaKnown RBP12.93□□□□□ -0.34
PTMA-201ENST00000341369 EN2P19622 333 aaPredicted RBP12.93□□□□□ -0.34
PTMA-201ENST00000341369 ARHGEF6Q15052 776 aa12.93□□□□□ -0.34
PTMA-201ENST00000341369 MXD3Q9BW11 206 aa12.93□□□□□ -0.34
PTMA-201ENST00000341369 CWC25Q9NXE8 425 aaPredicted RBP12.93□□□□□ -0.34
PTMA-201ENST00000341369 HTTP42858 3142 aa12.93□□□□□ -0.34
PTMA-201ENST00000341369 COL1A1P02452 1464 aaPredicted RBP12.92□□□□□ -0.34
PTMA-201ENST00000341369 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
PTMA-201ENST00000341369 NBPF11Q86T75 865 aa12.92□□□□□ -0.34
PTMA-201ENST00000341369 CD99L2Q8TCZ2 262 aa12.92□□□□□ -0.34
PTMA-201ENST00000341369 MYD88Q99836 296 aa12.92□□□□□ -0.34
PTMA-201ENST00000341369 DEFB129Q9H1M3 183 aa12.92□□□□□ -0.34
PTMA-201ENST00000341369 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.92□□□□□ -0.34
PTMA-201ENST00000341369 RBBP6Q7Z6E9 1792 aaKnown RBP12.92□□□□□ -0.34
PTMA-201ENST00000341369 IGF2BP3O00425 579 aaKnown RBP eCLIP12.91□□□□□ -0.341e-18■■■□□ 18.1
PTMA-201ENST00000341369 CCT4P50991 539 aaKnown RBP12.91□□□□□ -0.34
PTMA-201ENST00000341369 SP3Q02447 781 aa12.91□□□□□ -0.34
PTMA-201ENST00000341369 CRHR2Q13324 411 aa12.91□□□□□ -0.34
PTMA-201ENST00000341369 MAP3K11Q16584 847 aa12.91□□□□□ -0.34
PTMA-201ENST00000341369 SUPT20HL1Q3ZLR7 823 aa12.91□□□□□ -0.34
PTMA-201ENST00000341369 DUSP27Q5VZP5 1158 aa12.91□□□□□ -0.34
PTMA-201ENST00000341369 TTLL5Q6EMB2 1281 aa12.91□□□□□ -0.34
PTMA-201ENST00000341369 KIAA0825Q8IV33 1275 aa12.91□□□□□ -0.34
PTMA-201ENST00000341369 WNK4Q96J92 1243 aa12.91□□□□□ -0.34
PTMA-201ENST00000341369 BSDC1Q9NW68 430 aaPredicted RBP12.91□□□□□ -0.34
PTMA-201ENST00000341369 MINPP1Q9UNW1 487 aa12.91□□□□□ -0.34
PTMA-201ENST00000341369 LEMD3Q9Y2U8 911 aa12.91□□□□□ -0.34
PTMA-201ENST00000341369 PPP2R3BQ9Y5P8 575 aa12.91□□□□□ -0.34
PTMA-201ENST00000341369 DLGAP5Q15398 846 aa12.9□□□□□ -0.34
PTMA-201ENST00000341369 CENPFP49454 3210 aa12.9□□□□□ -0.34
PTMA-201ENST00000341369 WTIPA6NIX2 430 aaPredicted RBP12.89□□□□□ -0.35
PTMA-201ENST00000341369 MYO1BO43795 1136 aa12.89□□□□□ -0.35
PTMA-201ENST00000341369 DDX58O95786 925 aaKnown RBP12.89□□□□□ -0.35
PTMA-201ENST00000341369 CTSWP56202 376 aa12.89□□□□□ -0.35
PTMA-201ENST00000341369 JARID2Q92833 1246 aaPredicted RBP12.89□□□□□ -0.35
PTMA-201ENST00000341369 CLMNQ96JQ2 1002 aa12.89□□□□□ -0.35
PTMA-201ENST00000341369 FZD1Q9UP38 647 aa12.89□□□□□ -0.35
PTMA-201ENST00000341369 IREB2P48200 963 aaKnown RBP12.88□□□□□ -0.35
PTMA-201ENST00000341369 GTF2IP78347 998 aa12.88□□□□□ -0.35
PTMA-201ENST00000341369 SLC4A8Q2Y0W8 1093 aa12.88□□□□□ -0.35
PTMA-201ENST00000341369 SLC9C1Q4G0N8 1177 aa12.88□□□□□ -0.35
PTMA-201ENST00000341369 ZBED3Q96IU2 234 aaPredicted RBP12.88□□□□□ -0.35
PTMA-201ENST00000341369 ZNF333Q96JL9 665 aa12.88□□□□□ -0.35
PTMA-201ENST00000341369 CHMP4AQ9BY43 222 aa12.88□□□□□ -0.35
PTMA-201ENST00000341369 ANKRD2Q9GZV1 360 aa12.88□□□□□ -0.35
PTMA-201ENST00000341369 PHAXQ9H814 394 aaKnown RBP12.88□□□□□ -0.35
PTMA-201ENST00000341369 ZNF804BA4D1E1 1349 aa12.88□□□□□ -0.35
PTMA-201ENST00000341369 IGHMBP2P38935 993 aaKnown RBP12.87□□□□□ -0.35
PTMA-201ENST00000341369 ANKRD13AQ8IZ07 590 aa12.87□□□□□ -0.35
PTMA-201ENST00000341369 TTLL11Q8NHH1 800 aa12.87□□□□□ -0.35
PTMA-201ENST00000341369 METTL22Q9BUU2 404 aaPredicted RBP12.87□□□□□ -0.35
PTMA-201ENST00000341369 GREM2Q9H772 168 aa12.87□□□□□ -0.35
PTMA-201ENST00000341369 KIAA0100Q14667 2235 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms