RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 CSB-PGBD3P0DP91 1061 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 HAND2P61296 217 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 CCDC73Q6ZRK6 1079 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 LRRC8AQ8IWT6 810 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 CCDC112Q8NEF3 446 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 ZSCAN16Q9H4T2 348 aaPredicted RBP17.85■□□□□ 0.45
PERM1-201ENST00000341290 GJB4Q9NTQ9 266 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 A0A1B0GVL5 298 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 NPHP1O15259 732 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 KINO60870 393 aaKnown RBP17.85■□□□□ 0.45
PERM1-201ENST00000341290 DHX32Q7L7V1 743 aaKnown RBP17.85■□□□□ 0.45
PERM1-201ENST00000341290 IPO4Q8TEX9 1081 aaKnown RBP17.85■□□□□ 0.45
PERM1-201ENST00000341290 FMNL2Q96PY5 1086 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 POLR3DP05423 398 aaPredicted RBP17.85■□□□□ 0.45
PERM1-201ENST00000341290 SKILP12757 684 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 IL2RBP14784 551 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 EVA1CP58658 441 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 SNW1Q13573 536 aaKnown RBP17.85■□□□□ 0.45
PERM1-201ENST00000341290 AOPEPQ8N6M6 819 aa17.85■□□□□ 0.45
PERM1-201ENST00000341290 PFKFB2O60825 505 aa17.84■□□□□ 0.45
PERM1-201ENST00000341290 TOM1L2Q6ZVM7 507 aa17.84■□□□□ 0.45
PERM1-201ENST00000341290 CCDC85AQ96PX6 553 aaPredicted RBP17.84■□□□□ 0.45
PERM1-201ENST00000341290 USP21Q9UK80 565 aa17.84■□□□□ 0.45
PERM1-201ENST00000341290 CEP135Q66GS9 1140 aa17.84■□□□□ 0.45
PERM1-201ENST00000341290 KBTBD3Q8NAB2 608 aa17.84■□□□□ 0.45
PERM1-201ENST00000341290 NGLY1Q96IV0 654 aa17.84■□□□□ 0.45
PERM1-201ENST00000341290 PAG1Q9NWQ8 432 aa17.84■□□□□ 0.45
PERM1-201ENST00000341290 BIN1O00499 593 aa17.83■□□□□ 0.45
PERM1-201ENST00000341290 TATP17735 454 aaPredicted RBP17.83■□□□□ 0.45
PERM1-201ENST00000341290 STX1AQ16623 288 aa17.83■□□□□ 0.45
PERM1-201ENST00000341290 ISM2Q6H9L7 571 aa17.83■□□□□ 0.45
PERM1-201ENST00000341290 C8orf37Q96NL8 207 aa17.83■□□□□ 0.45
PERM1-201ENST00000341290 SMTNL1A8MU46 457 aa17.83■□□□□ 0.44
PERM1-201ENST00000341290 ILDR1Q86SU0 546 aaPredicted RBP17.83■□□□□ 0.44
PERM1-201ENST00000341290 SMARCC2Q8TAQ2 1214 aa17.83■□□□□ 0.44
PERM1-201ENST00000341290 SDF4Q9BRK5 362 aa17.83■□□□□ 0.44
PERM1-201ENST00000341290 TRPC5Q9UL62 973 aaPredicted RBP17.83■□□□□ 0.44
PERM1-201ENST00000341290 CCDC69A6NI79 296 aa17.82■□□□□ 0.44
PERM1-201ENST00000341290 E7EWF7 191 aa17.82■□□□□ 0.44
PERM1-201ENST00000341290 LRRC24Q50LG9 513 aa17.82■□□□□ 0.44
PERM1-201ENST00000341290 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.82■□□□□ 0.44
PERM1-201ENST00000341290 DHX40Q8IX18 779 aaKnown RBP17.82■□□□□ 0.44
PERM1-201ENST00000341290 RGPD3A6NKT7 1758 aaPredicted RBP17.82■□□□□ 0.44
PERM1-201ENST00000341290 RGPD4Q7Z3J3 1758 aa17.82■□□□□ 0.44
PERM1-201ENST00000341290 PHKG2P15735 406 aa17.82■□□□□ 0.44
PERM1-201ENST00000341290 FKBP4Q02790 459 aaKnown RBP eCLIP17.82■□□□□ 0.44
PERM1-201ENST00000341290 ZNF772Q68DY9 489 aaPredicted RBP17.82■□□□□ 0.44
PERM1-201ENST00000341290 RCOR1Q9UKL0 485 aa17.82■□□□□ 0.44
PERM1-201ENST00000341290 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
PERM1-201ENST00000341290 SNRPA1P09661 255 aaKnown RBP17.82■□□□□ 0.44
PERM1-201ENST00000341290 HSPD1P10809 573 aaKnown RBP17.82■□□□□ 0.44
PERM1-201ENST00000341290 PCDH11XQ9BZA7 1347 aa17.81■□□□□ 0.44
PERM1-201ENST00000341290 PCDH11YQ9BZA8 1340 aa17.81■□□□□ 0.44
PERM1-201ENST00000341290 PDIA3P30101 505 aaKnown RBP17.81■□□□□ 0.44
PERM1-201ENST00000341290 LRP10Q7Z4F1 713 aa17.81■□□□□ 0.44
PERM1-201ENST00000341290 PCDHA7Q9UN72 937 aa17.81■□□□□ 0.44
PERM1-201ENST00000341290 ZNF330Q9Y3S2 320 aaPredicted RBP17.8■□□□□ 0.44
PERM1-201ENST00000341290 LAMB4A4D0S4 1761 aa17.8■□□□□ 0.44
PERM1-201ENST00000341290 MEX3CQ5U5Q3 659 aaKnown RBP17.8■□□□□ 0.44
PERM1-201ENST00000341290 GJD4Q96KN9 370 aaPredicted RBP17.8■□□□□ 0.44
PERM1-201ENST00000341290 NDUFA8P51970 172 aa17.8■□□□□ 0.44
PERM1-201ENST00000341290 FAM160A1Q05DH4 1040 aa17.8■□□□□ 0.44
PERM1-201ENST00000341290 SF3A1Q15459 793 aaKnown RBP17.8■□□□□ 0.44
PERM1-201ENST00000341290 PTPN14Q15678 1187 aa17.8■□□□□ 0.44
PERM1-201ENST00000341290 KLHL34Q8N239 644 aa17.8■□□□□ 0.44
PERM1-201ENST00000341290 PUS3Q9BZE2 481 aaKnown RBP17.8■□□□□ 0.44
PERM1-201ENST00000341290 ZBTB3Q9H5J0 574 aa17.8■□□□□ 0.44
PERM1-201ENST00000341290 CLIC4Q9Y696 253 aa17.8■□□□□ 0.44
PERM1-201ENST00000341290 C5P01031 1676 aa17.79■□□□□ 0.44
PERM1-201ENST00000341290 M0R2C6 588 aa17.79■□□□□ 0.44
PERM1-201ENST00000341290 RABL6Q3YEC7 729 aaPredicted RBP17.79■□□□□ 0.44
PERM1-201ENST00000341290 NAA16Q6N069 864 aaPredicted RBP17.79■□□□□ 0.44
PERM1-201ENST00000341290 TTLL7Q6ZT98 887 aa17.79■□□□□ 0.44
PERM1-201ENST00000341290 STRN4Q9NRL3 753 aa17.79■□□□□ 0.44
PERM1-201ENST00000341290 ZNF215Q9UL58 517 aaPredicted RBP17.79■□□□□ 0.44
PERM1-201ENST00000341290 FDPSP14324 419 aaKnown RBP17.79■□□□□ 0.44
PERM1-201ENST00000341290 EXOSC10Q01780 885 aaKnown RBP17.79■□□□□ 0.44
PERM1-201ENST00000341290 PAXIP1Q6ZW49 1069 aaPredicted RBP17.79■□□□□ 0.44
PERM1-201ENST00000341290 ATG9AQ7Z3C6 839 aa17.79■□□□□ 0.44
PERM1-201ENST00000341290 ENGASEQ8NFI3 743 aa17.79■□□□□ 0.44
PERM1-201ENST00000341290 MAST3O60307 1309 aa17.78■□□□□ 0.44
PERM1-201ENST00000341290 SMC2O95347 1197 aa17.78■□□□□ 0.44
PERM1-201ENST00000341290 IFIT1P09914 478 aaKnown RBP17.78■□□□□ 0.44
PERM1-201ENST00000341290 WASHC4Q2M389 1173 aa17.78■□□□□ 0.44
PERM1-201ENST00000341290 DPCR1Q3MIW9 517 aa17.78■□□□□ 0.44
PERM1-201ENST00000341290 ZNF396Q96N95 335 aaPredicted RBP17.78■□□□□ 0.44
PERM1-201ENST00000341290 LLPHQ9BRT6 129 aaKnown RBP17.78■□□□□ 0.44
PERM1-201ENST00000341290 CYP27B1O15528 508 aa17.78■□□□□ 0.44
PERM1-201ENST00000341290 PTPN21Q16825 1174 aa17.78■□□□□ 0.44
PERM1-201ENST00000341290 ANO10Q9NW15 660 aa17.78■□□□□ 0.44
PERM1-201ENST00000341290 HMGB1P09429 215 aaKnown RBP17.77■□□□□ 0.44
PERM1-201ENST00000341290 FOXO4P98177 505 aa17.77■□□□□ 0.44
PERM1-201ENST00000341290 CEP57L1Q8IYX8 460 aa17.77■□□□□ 0.44
PERM1-201ENST00000341290 PAXBP1Q9Y5B6 917 aa17.77■□□□□ 0.44
PERM1-201ENST00000341290 CABP4P57796 275 aa17.77■□□□□ 0.44
PERM1-201ENST00000341290 CCZ1BP86790 482 aa17.77■□□□□ 0.44
PERM1-201ENST00000341290 CCZ1P86791 482 aaPredicted RBP17.77■□□□□ 0.44
PERM1-201ENST00000341290 ZCRB1Q8TBF4 217 aaKnown RBP17.77■□□□□ 0.44
PERM1-201ENST00000341290 OSBP2Q969R2 916 aa17.77■□□□□ 0.44
PERM1-201ENST00000341290 MRFAP1L1Q96HT8 127 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms