RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 NCAPD2Q15021 1401 aa10.9□□□□□ -0.67
TRERF1-201ENST00000340840 PRAMEF22A3QJZ6 481 aa10.9□□□□□ -0.67
TRERF1-201ENST00000340840 E7EWF7 191 aa10.9□□□□□ -0.67
TRERF1-201ENST00000340840 PRC1O43663 620 aa10.9□□□□□ -0.67
TRERF1-201ENST00000340840 AKAP17AQ02040 695 aaKnown RBP10.9□□□□□ -0.67
TRERF1-201ENST00000340840 ISM2Q6H9L7 571 aa10.9□□□□□ -0.67
TRERF1-201ENST00000340840 ERCC4Q92889 916 aaPredicted RBP10.9□□□□□ -0.67
TRERF1-201ENST00000340840 XPO4Q9C0E2 1151 aaKnown RBP10.9□□□□□ -0.67
TRERF1-201ENST00000340840 QTRT2Q9H974 415 aaKnown RBP10.9□□□□□ -0.67
TRERF1-201ENST00000340840 TBC1D2BQ9UPU7 963 aa10.9□□□□□ -0.67
TRERF1-201ENST00000340840 A0A0U1RQG5 324 aaPredicted RBP10.89□□□□□ -0.67
TRERF1-201ENST00000340840 A0A1W2PQ27 194 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 A0A1W2PQ64 194 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 A0A1W2PQD8 194 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 ARHGAP29Q52LW3 1261 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 DDX41Q9UJV9 622 aaKnown RBP10.89□□□□□ -0.67
TRERF1-201ENST00000340840 PIP4K2AP48426 406 aaPredicted RBP10.89□□□□□ -0.67
TRERF1-201ENST00000340840 IQCB1Q15051 598 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 USPL1Q5W0Q7 1092 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 FTOQ9C0B1 505 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRERF1-201ENST00000340840 SNRKQ9NRH2 765 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 PCDHA7Q9UN72 937 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 IGKV5-2P06315 115 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 NLRP12P59046 1061 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 CCDC102BQ68D86 513 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 CREBRFQ8IUR6 639 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 CNNM3Q8NE01 707 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 RTEL1Q9NZ71 1219 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 RFX7Q2KHR2 1363 aa10.89□□□□□ -0.67
TRERF1-201ENST00000340840 RXRBP28702 533 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 TIMM10P62072 90 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 RBM6P78332 1123 aaKnown RBP10.88□□□□□ -0.67
TRERF1-201ENST00000340840 ARID5BQ14865 1188 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 RAB11FIP4Q86YS3 637 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 SMARCC2Q8TAQ2 1214 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 SLC52A2Q9HAB3 445 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 PSDA5PKW4 1024 aaPredicted RBP10.88□□□□□ -0.67
TRERF1-201ENST00000340840 ZNF202O95125 648 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 MARCKSP29966 332 aaPredicted RBP10.88□□□□□ -0.67
TRERF1-201ENST00000340840 TNNT3P45378 269 aaPredicted RBP10.88□□□□□ -0.67
TRERF1-201ENST00000340840 ANO1Q5XXA6 986 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 TRIM22Q8IYM9 498 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 TAF6LQ9Y6J9 622 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 AKAP12Q02952 1782 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 ERICH2A1L162 156 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 PDIA3P30101 505 aaKnown RBP10.88□□□□□ -0.67
TRERF1-201ENST00000340840 CASQ1P31415 396 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 FANCCQ00597 558 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 MYL5Q02045 173 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 OTUD7BQ6GQQ9 843 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 ZNF496Q96IT1 587 aaPredicted RBP10.88□□□□□ -0.67
TRERF1-201ENST00000340840 SH3TC1Q8TE82 1336 aa10.88□□□□□ -0.67
TRERF1-201ENST00000340840 PTPN12Q05209 780 aaKnown RBP10.87□□□□□ -0.67
TRERF1-201ENST00000340840 SART3Q15020 963 aaKnown RBP10.87□□□□□ -0.67
TRERF1-201ENST00000340840 WASF1Q92558 559 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 TIGD1Q96MW7 591 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 ALG1Q9BT22 464 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 BTG4Q9NY30 223 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 PODXL2Q9NZ53 605 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 HSPD1P10809 573 aaKnown RBP10.87□□□□□ -0.67
TRERF1-201ENST00000340840 GTF2E1P29083 439 aaPredicted RBP10.87□□□□□ -0.67
TRERF1-201ENST00000340840 METAP2P50579 478 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRERF1-201ENST00000340840 NAA30Q147X3 362 aaPredicted RBP10.87□□□□□ -0.67
TRERF1-201ENST00000340840 MYSM1Q5VVJ2 828 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 ZNF772Q68DY9 489 aaPredicted RBP10.87□□□□□ -0.67
TRERF1-201ENST00000340840 GOLGA6L1Q8N7Z2 621 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 ANKRD20A12PQ8NF67 263 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 PLBD2Q8NHP8 589 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 CACNA1FO60840 1977 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 FILIP1LQ4L180 1135 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 PPFIBP1Q86W92 1011 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 AK7Q96M32 723 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 A0A087WWV3 80 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 EYA2O00167 538 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 ATP2B1P20020 1258 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 NDUFA8P51970 172 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 GNG11P61952 73 aa10.87□□□□□ -0.67
TRERF1-201ENST00000340840 CWC15Q9P013 229 aaKnown RBP10.87□□□□□ -0.67
TRERF1-201ENST00000340840 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRERF1-201ENST00000340840 IARSP41252 1262 aaKnown RBP10.86□□□□□ -0.67
TRERF1-201ENST00000340840 EPHA10Q5JZY3 1008 aa10.86□□□□□ -0.67
TRERF1-201ENST00000340840 ARHGEF25Q86VW2 580 aa10.86□□□□□ -0.67
TRERF1-201ENST00000340840 UTYO14607 1347 aa10.86□□□□□ -0.67
TRERF1-201ENST00000340840 CARMIL3Q8ND23 1372 aa10.86□□□□□ -0.67
TRERF1-201ENST00000340840 A0A1B0GUL7 405 aa10.86□□□□□ -0.67
TRERF1-201ENST00000340840 POLR3GO15318 223 aaPredicted RBP10.86□□□□□ -0.67
TRERF1-201ENST00000340840 ETF1P62495 437 aaKnown RBP10.86□□□□□ -0.67
TRERF1-201ENST00000340840 ERCC6LQ2NKX8 1250 aa10.86□□□□□ -0.67
TRERF1-201ENST00000340840 ZMYM1Q5SVZ6 1142 aa10.86□□□□□ -0.67
TRERF1-201ENST00000340840 GOLPH3LQ9H4A5 285 aa10.86□□□□□ -0.67
TRERF1-201ENST00000340840 ZBTB3Q9H5J0 574 aa10.86□□□□□ -0.67
TRERF1-201ENST00000340840 DPCR1Q3MIW9 517 aa10.86□□□□□ -0.67
TRERF1-201ENST00000340840 DCAF5Q96JK2 942 aa10.86□□□□□ -0.67
TRERF1-201ENST00000340840 OSBPL5Q9H0X9 879 aaPredicted RBP10.86□□□□□ -0.67
TRERF1-201ENST00000340840 USP27XA6NNY8 438 aa10.85□□□□□ -0.67
TRERF1-201ENST00000340840 EXOC5O00471 708 aa10.85□□□□□ -0.67
TRERF1-201ENST00000340840 IDH1O75874 414 aaKnown RBP10.85□□□□□ -0.67
TRERF1-201ENST00000340840 XBP1P17861 261 aa10.85□□□□□ -0.67
TRERF1-201ENST00000340840 SLFNL1Q499Z3 407 aa10.85□□□□□ -0.67
TRERF1-201ENST00000340840 LINC00301Q8NCQ3 95 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms