RNA–Protein interactions for RNA: ENST00000340578.10

RANBP3-202, Transcript of RAN binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RANBP3, Length 3,233 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-202ENST00000340578 CNNM1Q9NRU3 951 aa13.35□□□□□ -0.27
RANBP3-202ENST00000340578 ITGA6P23229 1130 aa13.34□□□□□ -0.27
RANBP3-202ENST00000340578 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
RANBP3-202ENST00000340578 TRIM28Q13263 835 aaKnown RBP13.34□□□□□ -0.27
RANBP3-202ENST00000340578 GIGYF2Q6Y7W6 1299 aaKnown RBP13.34□□□□□ -0.27
RANBP3-202ENST00000340578 TNS2Q63HR2 1409 aa13.34□□□□□ -0.27
RANBP3-202ENST00000340578 ATP2B3Q16720 1220 aa13.34□□□□□ -0.27
RANBP3-202ENST00000340578 ZSCAN16Q9H4T2 348 aaPredicted RBP13.34□□□□□ -0.27
RANBP3-202ENST00000340578 GREM2Q9H772 168 aa13.34□□□□□ -0.27
RANBP3-202ENST00000340578 TRMT112Q9UI30 125 aaKnown RBP13.34□□□□□ -0.27
RANBP3-202ENST00000340578 MAP3K15Q6ZN16 1313 aa13.34□□□□□ -0.27
RANBP3-202ENST00000340578 KCNA4P22459 653 aa13.34□□□□□ -0.27
RANBP3-202ENST00000340578 IMMTQ16891 758 aaKnown RBP13.34□□□□□ -0.27
RANBP3-202ENST00000340578 LLPHQ9BRT6 129 aaKnown RBP13.34□□□□□ -0.27
RANBP3-202ENST00000340578 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
RANBP3-202ENST00000340578 GPHNQ9NQX3 736 aaPredicted RBP13.34□□□□□ -0.27
RANBP3-202ENST00000340578 CFAP45Q9UL16 551 aa13.34□□□□□ -0.27
RANBP3-202ENST00000340578 KIF3AQ9Y496 699 aa13.34□□□□□ -0.27
RANBP3-202ENST00000340578 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.33□□□□□ -0.28
RANBP3-202ENST00000340578 NR1I2O75469 434 aa13.33□□□□□ -0.28
RANBP3-202ENST00000340578 CTDNEP1O95476 244 aa13.33□□□□□ -0.28
RANBP3-202ENST00000340578 SMARCC2Q8TAQ2 1214 aa13.33□□□□□ -0.28
RANBP3-202ENST00000340578 PGBD1Q96JS3 809 aa13.33□□□□□ -0.28
RANBP3-202ENST00000340578 PUS7LQ9H0K6 701 aaKnown RBP13.33□□□□□ -0.28
RANBP3-202ENST00000340578 CSF1RP07333 972 aa13.33□□□□□ -0.28
RANBP3-202ENST00000340578 PDIA3P30101 505 aaKnown RBP13.33□□□□□ -0.28
RANBP3-202ENST00000340578 HMGN5P82970 282 aaKnown RBP13.33□□□□□ -0.28
RANBP3-202ENST00000340578 TYRO3Q06418 890 aa13.33□□□□□ -0.28
RANBP3-202ENST00000340578 KIAA2012Q0VF49 1180 aa13.33□□□□□ -0.28
RANBP3-202ENST00000340578 NLRP10Q86W26 655 aa13.33□□□□□ -0.28
RANBP3-202ENST00000340578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.33□□□□□ -0.28
RANBP3-202ENST00000340578 FTOQ9C0B1 505 aaKnown RBP eCLIP13.33□□□□□ -0.28
RANBP3-202ENST00000340578 CTNNA3Q9UI47 895 aa13.33□□□□□ -0.28
RANBP3-202ENST00000340578 TBC1D2BQ9UPU7 963 aa13.33□□□□□ -0.28
RANBP3-202ENST00000340578 FGAP02671 866 aa13.32□□□□□ -0.28
RANBP3-202ENST00000340578 ZFYP08048 801 aaPredicted RBP13.32□□□□□ -0.28
RANBP3-202ENST00000340578 RAB11FIP4Q86YS3 637 aa13.32□□□□□ -0.28
RANBP3-202ENST00000340578 TTLL11Q8NHH1 800 aa13.32□□□□□ -0.28
RANBP3-202ENST00000340578 ZBTB1Q9Y2K1 713 aa13.32□□□□□ -0.28
RANBP3-202ENST00000340578 ANKRD18BA2A2Z9 1011 aa13.32□□□□□ -0.28
RANBP3-202ENST00000340578 IRS4O14654 1257 aaPredicted RBP13.32□□□□□ -0.28
RANBP3-202ENST00000340578 SPC24Q8NBT2 197 aa13.32□□□□□ -0.28
RANBP3-202ENST00000340578 DDX19AQ9NUU7 478 aaKnown RBP13.32□□□□□ -0.28
RANBP3-202ENST00000340578 FAM177BA6PVY3 158 aa13.32□□□□□ -0.28
RANBP3-202ENST00000340578 LUZP1Q86V48 1076 aa13.32□□□□□ -0.28
RANBP3-202ENST00000340578 AP5Z1O43299 807 aa13.31□□□□□ -0.28
RANBP3-202ENST00000340578 IRX5P78411 483 aaPredicted RBP13.31□□□□□ -0.28
RANBP3-202ENST00000340578 ANO6Q4KMQ2 910 aa13.31□□□□□ -0.28
RANBP3-202ENST00000340578 FAM200AQ8TCP9 573 aa13.31□□□□□ -0.28
RANBP3-202ENST00000340578 APPBP2Q92624 585 aa13.31□□□□□ -0.28
RANBP3-202ENST00000340578 PLA2G12BQ9BX93 195 aa13.31□□□□□ -0.28
RANBP3-202ENST00000340578 MRVI1Q9Y6F6 885 aa13.31□□□□□ -0.28
RANBP3-202ENST00000340578 IDH1O75874 414 aaKnown RBP13.31□□□□□ -0.28
RANBP3-202ENST00000340578 CTSWP56202 376 aa13.31□□□□□ -0.28
RANBP3-202ENST00000340578 SASS6Q6UVJ0 657 aa13.31□□□□□ -0.28
RANBP3-202ENST00000340578 RALYLQ86SE5 291 aaKnown RBP13.31□□□□□ -0.28
RANBP3-202ENST00000340578 SLC4A9Q96Q91 983 aa13.31□□□□□ -0.28
RANBP3-202ENST00000340578 TJP1Q07157 1748 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 GPAA1O43292 621 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 MCAMP43121 646 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 ZNF274Q96GC6 653 aaPredicted RBP13.3□□□□□ -0.28
RANBP3-202ENST00000340578 AGXT2Q9BYV1 514 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 CLSTN2Q9H4D0 955 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 RIPOR2Q9Y4F9 1068 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 NUP188Q5SRE5 1749 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 EXOC5O00471 708 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 ZNF213O14771 459 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 PRC1O43663 620 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 CYP19A1P11511 503 aaPredicted RBP13.3□□□□□ -0.28
RANBP3-202ENST00000340578 SLC9C2Q5TAH2 1124 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 NAA16Q6N069 864 aaPredicted RBP13.3□□□□□ -0.28
RANBP3-202ENST00000340578 HELBQ8NG08 1087 aaPredicted RBP13.3□□□□□ -0.28
RANBP3-202ENST00000340578 CCDC94Q9BW85 323 aaPredicted RBP13.3□□□□□ -0.28
RANBP3-202ENST00000340578 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.3□□□□□ -0.281e-6■■■□□ 15.4
RANBP3-202ENST00000340578 UBR2Q8IWV8 1755 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 KAT6BQ8WYB5 2073 aa13.3□□□□□ -0.28
RANBP3-202ENST00000340578 XIRP1Q702N8 1843 aaKnown RBP13.29□□□□□ -0.28
RANBP3-202ENST00000340578 KLF18A0A0U1RQI7 1052 aa13.29□□□□□ -0.28
RANBP3-202ENST00000340578 FOXP2O15409 715 aa13.29□□□□□ -0.28
RANBP3-202ENST00000340578 OTUD7BQ6GQQ9 843 aa13.29□□□□□ -0.28
RANBP3-202ENST00000340578 DZIP3Q86Y13 1208 aaKnown RBP13.29□□□□□ -0.28
RANBP3-202ENST00000340578 C17orf53Q8N3J3 647 aaPredicted RBP13.29□□□□□ -0.28
RANBP3-202ENST00000340578 USP28Q96RU2 1077 aa13.29□□□□□ -0.28
RANBP3-202ENST00000340578 GOLGA8BA8MQT2 603 aa13.28□□□□□ -0.28
RANBP3-202ENST00000340578 CCAR1Q8IX12 1150 aaKnown RBP13.28□□□□□ -0.28
RANBP3-202ENST00000340578 NCOA7Q8NI08 942 aa13.28□□□□□ -0.28
RANBP3-202ENST00000340578 CDHR2Q9BYE9 1310 aa13.28□□□□□ -0.28
RANBP3-202ENST00000340578 CPLX1O14810 134 aa13.28□□□□□ -0.28
RANBP3-202ENST00000340578 ME1P48163 572 aa13.28□□□□□ -0.28
RANBP3-202ENST00000340578 ZNF396Q96N95 335 aaPredicted RBP13.28□□□□□ -0.28
RANBP3-202ENST00000340578 DNAJC25Q9H1X3 360 aa13.28□□□□□ -0.28
RANBP3-202ENST00000340578 CBX8Q9HC52 389 aa13.28□□□□□ -0.28
RANBP3-202ENST00000340578 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
RANBP3-202ENST00000340578 ADD1P35611 737 aaKnown RBP13.28□□□□□ -0.28
RANBP3-202ENST00000340578 TRDNQ13061 729 aa13.27□□□□□ -0.28
RANBP3-202ENST00000340578 DRC7Q8IY82 874 aa13.27□□□□□ -0.28
RANBP3-202ENST00000340578 ZNF526Q8TF50 670 aaPredicted RBP13.27□□□□□ -0.28
RANBP3-202ENST00000340578 CARMIL3Q8ND23 1372 aa13.27□□□□□ -0.29
RANBP3-202ENST00000340578 PDE8AO60658 829 aa13.27□□□□□ -0.29
RANBP3-202ENST00000340578 PDE8BO95263 885 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms