RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 EGFRP00533 1210 aa18.85■□□□□ 0.61
UBE3B-201ENST00000340074 USP17L8P0C7I0 530 aa18.85■□□□□ 0.61
UBE3B-201ENST00000340074 ADORA1P30542 326 aa18.85■□□□□ 0.61
UBE3B-201ENST00000340074 HIRAP54198 1017 aaPredicted RBP18.85■□□□□ 0.61
UBE3B-201ENST00000340074 TBC1D10BQ4KMP7 808 aaPredicted RBP18.85■□□□□ 0.61
UBE3B-201ENST00000340074 FAM205AQ6ZU69 1335 aa18.85■□□□□ 0.61
UBE3B-201ENST00000340074 HMMRO75330 724 aa18.84■□□□□ 0.61
UBE3B-201ENST00000340074 FRAT2O75474 233 aaPredicted RBP18.84■□□□□ 0.61
UBE3B-201ENST00000340074 ZNF280AP59817 542 aaPredicted RBP18.84■□□□□ 0.61
UBE3B-201ENST00000340074 RBM26Q5T8P6 1007 aaKnown RBP18.84■□□□□ 0.61
UBE3B-201ENST00000340074 CERS5Q8N5B7 392 aa18.84■□□□□ 0.61
UBE3B-201ENST00000340074 CRBNQ96SW2 442 aa18.84■□□□□ 0.61
UBE3B-201ENST00000340074 EXOC6BQ9Y2D4 811 aa18.84■□□□□ 0.61
UBE3B-201ENST00000340074 SUPT16HQ9Y5B9 1047 aaKnown RBP18.84■□□□□ 0.61
UBE3B-201ENST00000340074 ECM29Q5VYK3 1845 aa18.84■□□□□ 0.61
UBE3B-201ENST00000340074 KIAA0825Q8IV33 1275 aa18.83■□□□□ 0.61
UBE3B-201ENST00000340074 XAGE2Q96GT9 111 aa18.83■□□□□ 0.61
UBE3B-201ENST00000340074 NEUROD6Q96NK8 337 aa18.83■□□□□ 0.61
UBE3B-201ENST00000340074 PHKA1P46020 1223 aa18.83■□□□□ 0.6
UBE3B-201ENST00000340074 FKBP1AP62942 108 aaKnown RBP18.83■□□□□ 0.6
UBE3B-201ENST00000340074 CHAF1AQ13111 956 aaPredicted RBP18.83■□□□□ 0.6
UBE3B-201ENST00000340074 KIF4BQ2VIQ3 1234 aa18.83■□□□□ 0.6
UBE3B-201ENST00000340074 MAP1SQ66K74 1059 aaPredicted RBP18.83■□□□□ 0.6
UBE3B-201ENST00000340074 OGFOD1Q8N543 542 aa18.83■□□□□ 0.6
UBE3B-201ENST00000340074 TRPM7Q96QT4 1865 aa18.82■□□□□ 0.6
UBE3B-201ENST00000340074 MFSD14BQ5SR56 506 aa18.82■□□□□ 0.6
UBE3B-201ENST00000340074 MYOZ2Q9NPC6 264 aa18.82■□□□□ 0.6
UBE3B-201ENST00000340074 COL1A1P02452 1464 aaPredicted RBP18.81■□□□□ 0.6
UBE3B-201ENST00000340074 F8W031 263 aaPredicted RBP18.81■□□□□ 0.6
UBE3B-201ENST00000340074 TNNI3KQ59H18 835 aa18.81■□□□□ 0.6
UBE3B-201ENST00000340074 CCDC102BQ68D86 513 aa18.81■□□□□ 0.6
UBE3B-201ENST00000340074 CNTROBQ8N137 903 aa18.81■□□□□ 0.6
UBE3B-201ENST00000340074 GPR108Q9NPR9 543 aa18.81■□□□□ 0.6
UBE3B-201ENST00000340074 GNL3LQ9NVN8 582 aaKnown RBP18.81■□□□□ 0.6
UBE3B-201ENST00000340074 FPGT-TNNI3KV9GXZ4 949 aa18.81■□□□□ 0.6
UBE3B-201ENST00000340074 CEP350Q5VT06 3117 aa18.8■□□□□ 0.6
UBE3B-201ENST00000340074 HSP90AB4PQ58FF6 505 aa18.8■□□□□ 0.6
UBE3B-201ENST00000340074 ZC3H15Q8WU90 426 aaKnown RBP18.8■□□□□ 0.6
UBE3B-201ENST00000340074 PGAP2Q9UHJ9 254 aa18.8■□□□□ 0.6
UBE3B-201ENST00000340074 HDAC9Q9UKV0 1011 aa18.8■□□□□ 0.6
UBE3B-201ENST00000340074 AKAP11Q9UKA4 1901 aa18.79■□□□□ 0.6
UBE3B-201ENST00000340074 ITGBL1O95965 494 aaPredicted RBP18.79■□□□□ 0.6
UBE3B-201ENST00000340074 HSPA6P17066 643 aa18.79■□□□□ 0.6
UBE3B-201ENST00000340074 ERC1Q8IUD2 1116 aa18.79■□□□□ 0.6
UBE3B-201ENST00000340074 APBB1O00213 710 aa18.78■□□□□ 0.6
UBE3B-201ENST00000340074 MMP14P50281 582 aa18.78■□□□□ 0.6
UBE3B-201ENST00000340074 GORABQ5T7V8 394 aa18.78■□□□□ 0.6
UBE3B-201ENST00000340074 TBC1D22AQ8WUA7 517 aa18.78■□□□□ 0.6
UBE3B-201ENST00000340074 PCDHB15Q9Y5E8 787 aa18.78■□□□□ 0.6
UBE3B-201ENST00000340074 ASTN2O75129 1339 aaPredicted RBP18.78■□□□□ 0.6
UBE3B-201ENST00000340074 MYO5AQ9Y4I1 1855 aaKnown RBP18.78■□□□□ 0.6
UBE3B-201ENST00000340074 SCARF1Q14162 830 aa18.77■□□□□ 0.6
UBE3B-201ENST00000340074 GRIK5Q16478 980 aa18.77■□□□□ 0.6
UBE3B-201ENST00000340074 DBNDD2Q9BQY9 259 aa18.77■□□□□ 0.6
UBE3B-201ENST00000340074 DENND2AQ9ULE3 1009 aa18.77■□□□□ 0.6
UBE3B-201ENST00000340074 TTF2Q9UNY4 1162 aaKnown RBP18.77■□□□□ 0.6
UBE3B-201ENST00000340074 PASKQ96RG2 1323 aa18.77■□□□□ 0.6
UBE3B-201ENST00000340074 SEMA3EO15041 775 aa18.76■□□□□ 0.59
UBE3B-201ENST00000340074 RASGRF1Q13972 1273 aa18.76■□□□□ 0.59
UBE3B-201ENST00000340074 NBPF9Q3BBW0 867 aa18.76■□□□□ 0.59
UBE3B-201ENST00000340074 WDR66Q8TBY9 1149 aa18.76■□□□□ 0.59
UBE3B-201ENST00000340074 RHPN1Q8TCX5 695 aa18.76■□□□□ 0.59
UBE3B-201ENST00000340074 EAF2Q96CJ1 260 aaPredicted RBP18.76■□□□□ 0.59
UBE3B-201ENST00000340074 KIF1BPQ96EK5 621 aa18.76■□□□□ 0.59
UBE3B-201ENST00000340074 IL1RAPL2Q9NP60 686 aa18.76■□□□□ 0.59
UBE3B-201ENST00000340074 MYH2Q9UKX2 1941 aa18.76■□□□□ 0.59
UBE3B-201ENST00000340074 WNT10BO00744 389 aa18.75■□□□□ 0.59
UBE3B-201ENST00000340074 ZBTB22O15209 634 aa18.75■□□□□ 0.59
UBE3B-201ENST00000340074 RAB11FIP3O75154 756 aa18.75■□□□□ 0.59
UBE3B-201ENST00000340074 GLIS2Q9BZE0 524 aaPredicted RBP18.75■□□□□ 0.59
UBE3B-201ENST00000340074 CCDC8Q9H0W5 538 aaPredicted RBP18.75■□□□□ 0.59
UBE3B-201ENST00000340074 TLR7Q9NYK1 1049 aaKnown RBP18.75■□□□□ 0.59
UBE3B-201ENST00000340074 GGA3Q9NZ52 723 aa18.75■□□□□ 0.59
UBE3B-201ENST00000340074 PCDHAC2Q9Y5I4 1007 aa18.75■□□□□ 0.59
UBE3B-201ENST00000340074 TRAF5O00463 557 aa18.74■□□□□ 0.59
UBE3B-201ENST00000340074 APLP1P51693 650 aa18.74■□□□□ 0.59
UBE3B-201ENST00000340074 FMR1Q06787 632 aaKnown RBP eCLIP18.74■□□□□ 0.59
UBE3B-201ENST00000340074 ANGEL2Q5VTE6 544 aaKnown RBP18.74■□□□□ 0.59
UBE3B-201ENST00000340074 DCPSQ96C86 337 aaKnown RBP18.74■□□□□ 0.59
UBE3B-201ENST00000340074 ZBED3Q96IU2 234 aaPredicted RBP18.74■□□□□ 0.59
UBE3B-201ENST00000340074 DBNLQ9UJU6 430 aaKnown RBP18.74■□□□□ 0.59
UBE3B-201ENST00000340074 ARID4AP29374 1257 aaPredicted RBP18.74■□□□□ 0.59
UBE3B-201ENST00000340074 DLGAP5Q15398 846 aa18.74■□□□□ 0.59
UBE3B-201ENST00000340074 CFAP100Q494V2 611 aa18.74■□□□□ 0.59
UBE3B-201ENST00000340074 CDC37L1Q7L3B6 337 aa18.74■□□□□ 0.59
UBE3B-201ENST00000340074 AACSQ86V21 672 aa18.74■□□□□ 0.59
UBE3B-201ENST00000340074 MTMR14Q8NCE2 650 aa18.74■□□□□ 0.59
UBE3B-201ENST00000340074 EXOC6Q8TAG9 804 aa18.74■□□□□ 0.59
UBE3B-201ENST00000340074 SUGT1Q9Y2Z0 365 aa18.74■□□□□ 0.59
UBE3B-201ENST00000340074 RBM5P52756 815 aaKnown RBP eCLIP18.73■□□□□ 0.59
UBE3B-201ENST00000340074 CCDC158Q5M9N0 1113 aa18.73■□□□□ 0.59
UBE3B-201ENST00000340074 TTC39AQ5SRH9 613 aa18.73■□□□□ 0.59
UBE3B-201ENST00000340074 KRT26Q7Z3Y9 468 aa18.73■□□□□ 0.59
UBE3B-201ENST00000340074 USP48Q86UV5 1035 aa18.73■□□□□ 0.59
UBE3B-201ENST00000340074 BCL11AQ9H165 835 aa18.73■□□□□ 0.59
UBE3B-201ENST00000340074 SERPINA10Q9UK55 444 aa18.73■□□□□ 0.59
UBE3B-201ENST00000340074 PDS5AQ29RF7 1337 aaKnown RBP18.73■□□□□ 0.59
UBE3B-201ENST00000340074 SALL1Q9NSC2 1324 aa18.73■□□□□ 0.59
UBE3B-201ENST00000340074 UQCRFS1P1P0C7P4 283 aa18.72■□□□□ 0.59
UBE3B-201ENST00000340074 PRDX5P30044 214 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms