RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 RBM8AQ9Y5S9 174 aaKnown RBP10.7□□□□□ -0.7
RPGR-202ENST00000339363 ADAMTS13Q76LX8 1427 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 SHTN1A0MZ66 631 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 ZSCAN12O43309 604 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 OS9Q13438 667 aaPredicted RBP10.7□□□□□ -0.7
RPGR-202ENST00000339363 FBXW10Q5XX13 1052 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 ZSWIM6Q9HCJ5 1215 aa10.7□□□□□ -0.7
RPGR-202ENST00000339363 ERBB3P21860 1342 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 NPHP3Q7Z494 1330 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 CAVIN2O95810 425 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 RHOXF2BP0C7M4 288 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 INPP5BP32019 993 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 CORO7P57737 925 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 MPRIPQ6WCQ1 1025 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 C11orf57Q6ZUT1 292 aaPredicted RBP10.69□□□□□ -0.7
RPGR-202ENST00000339363 MRFAP1L1Q96HT8 127 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 CEP89Q96ST8 783 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 RHOXF2Q9BQY4 288 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 CLSTN2Q9H4D0 955 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 FAM53CQ9NYF3 392 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 AGLP35573 1532 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 BIN1O00499 593 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 HOXC9P31274 260 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 NLRP6P59044 892 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 CREB3L3Q68CJ9 461 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 BOLA2Q9H3K6 86 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 RAB11FIP3O75154 756 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 ZRANB2O95218 330 aaKnown RBP eCLIP10.69□□□□□ -0.7
RPGR-202ENST00000339363 ZKSCAN1P17029 563 aaPredicted RBP10.69□□□□□ -0.7
RPGR-202ENST00000339363 ATP2B2Q01814 1243 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 CFAP100Q494V2 611 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 NBPF6Q5VWK0 638 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 TTC19Q6DKK2 380 aaPredicted RBP10.69□□□□□ -0.7
RPGR-202ENST00000339363 N4BP2L2Q92802 583 aaPredicted RBP10.69□□□□□ -0.7
RPGR-202ENST00000339363 NBPF4Q96M43 638 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 VEZTQ9HBM0 779 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 CYP46A1Q9Y6A2 500 aa10.69□□□□□ -0.7
RPGR-202ENST00000339363 NPHP4O75161 1426 aaPredicted RBP10.68□□□□□ -0.7
RPGR-202ENST00000339363 PLEKHG3A1L390 1219 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 WWC2Q6AWC2 1192 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.68□□□□□ -0.7
RPGR-202ENST00000339363 ARHGEF10O15013 1369 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 NALCNQ8IZF0 1738 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 CCT5P48643 541 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 CCZ1BP86790 482 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 CCZ1P86791 482 aaPredicted RBP10.68□□□□□ -0.7
RPGR-202ENST00000339363 NAA25Q14CX7 972 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 EPHA10Q5JZY3 1008 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 REXO1L1PQ8IX06 675 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 CAPN7Q9Y6W3 813 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 SLC27A2O14975 620 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 EIF4A1P60842 406 aaKnown RBP10.68□□□□□ -0.7
RPGR-202ENST00000339363 RNF187Q5TA31 235 aaPredicted RBP10.68□□□□□ -0.7
RPGR-202ENST00000339363 PRPF38AQ8NAV1 312 aaKnown RBP10.68□□□□□ -0.7
RPGR-202ENST00000339363 PLCD4Q9BRC7 762 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 FAM204AQ9H8W3 233 aa10.68□□□□□ -0.7
RPGR-202ENST00000339363 H3BQF6 201 aa10.67□□□□□ -0.7
RPGR-202ENST00000339363 TUBB4AP04350 444 aa10.67□□□□□ -0.7
RPGR-202ENST00000339363 PDE6BP35913 854 aa10.67□□□□□ -0.7
RPGR-202ENST00000339363 ME1P48163 572 aa10.67□□□□□ -0.7
RPGR-202ENST00000339363 APOBRQ0VD83 1088 aa10.67□□□□□ -0.7
RPGR-202ENST00000339363 CEP120Q8N960 986 aa10.67□□□□□ -0.7
RPGR-202ENST00000339363 GOLPH3LQ9H4A5 285 aa10.67□□□□□ -0.7
RPGR-202ENST00000339363 PPP6R1Q9UPN7 881 aa10.67□□□□□ -0.7
RPGR-202ENST00000339363 PPP1R12AO14974 1030 aaPredicted RBP10.67□□□□□ -0.7
RPGR-202ENST00000339363 CLNS1AP54105 237 aaKnown RBP10.67□□□□□ -0.7
RPGR-202ENST00000339363 AKAP17AQ02040 695 aaKnown RBP10.67□□□□□ -0.7
RPGR-202ENST00000339363 KARSQ15046 597 aaKnown RBP10.67□□□□□ -0.7
RPGR-202ENST00000339363 AACSQ86V21 672 aa10.67□□□□□ -0.7
RPGR-202ENST00000339363 L2HGDHQ9H9P8 463 aa10.67□□□□□ -0.7
RPGR-202ENST00000339363 CPSF2Q9P2I0 782 aaKnown RBP10.67□□□□□ -0.7
RPGR-202ENST00000339363 FLT4P35916 1363 aa10.67□□□□□ -0.7
RPGR-202ENST00000339363 PIK3C2AO00443 1686 aa10.67□□□□□ -0.7
RPGR-202ENST00000339363 TADA3O75528 432 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 PEX19P40855 299 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 KIF4BQ2VIQ3 1234 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 E4F1Q66K89 784 aaPredicted RBP10.66□□□□□ -0.7
RPGR-202ENST00000339363 AFAP1L1Q8TED9 768 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 ATG3Q9NT62 314 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 SPATA31D1Q6ZQQ2 1576 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 TTC21AQ8NDW8 1320 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 WDHD1O75717 1129 aaPredicted RBP10.66□□□□□ -0.7
RPGR-202ENST00000339363 LMOD1P29536 600 aaPredicted RBP10.66□□□□□ -0.7
RPGR-202ENST00000339363 CDC25BP30305 580 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 AIMP1Q12904 312 aaKnown RBP10.66□□□□□ -0.7
RPGR-202ENST00000339363 NAIF1Q69YI7 327 aaPredicted RBP10.66□□□□□ -0.7
RPGR-202ENST00000339363 SUGP1Q8IWZ8 645 aaKnown RBP10.66□□□□□ -0.7
RPGR-202ENST00000339363 CNTROBQ8N137 903 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 LEO1Q8WVC0 666 aaPredicted RBP10.66□□□□□ -0.7
RPGR-202ENST00000339363 SUCLG2Q96I99 432 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 GJB4Q9NTQ9 266 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 PSD3Q9NYI0 1048 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 MAP3K2Q9Y2U5 619 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 FER1L4A9Z1Z3 1794 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 FMN2Q9NZ56 1722 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 CRYBG1Q9Y4K1 1723 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 LRRC37A3O60309 1634 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 PPFIA4O75335 1185 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 NEDD9Q14511 834 aa10.66□□□□□ -0.7
RPGR-202ENST00000339363 VPS53Q5VIR6 699 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms