RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 UBE4AQ14139 1066 aa26.71■■□□□ 1.87
PDLIM2-203ENST00000339162 PRR5LQ6MZQ0 368 aa26.71■■□□□ 1.87
PDLIM2-203ENST00000339162 MYH7P12883 1935 aa26.71■■□□□ 1.87
PDLIM2-203ENST00000339162 HAND2P61296 217 aa26.71■■□□□ 1.87
PDLIM2-203ENST00000339162 LRRC2Q9BYS8 371 aa26.71■■□□□ 1.87
PDLIM2-203ENST00000339162 BAG4O95429 457 aaKnown RBP26.7■■□□□ 1.87
PDLIM2-203ENST00000339162 FGAP02671 866 aa26.7■■□□□ 1.87
PDLIM2-203ENST00000339162 UBE3CQ15386 1083 aa26.7■■□□□ 1.87
PDLIM2-203ENST00000339162 MAGEB6Q8N7X4 407 aa26.7■■□□□ 1.87
PDLIM2-203ENST00000339162 CHAMP1Q96JM3 812 aa26.7■■□□□ 1.87
PDLIM2-203ENST00000339162 TCRBV5S4A2TA0A5A2 114 aa26.7■■□□□ 1.86
PDLIM2-203ENST00000339162 RXRBP28702 533 aa26.7■■□□□ 1.86
PDLIM2-203ENST00000339162 ST3GAL1Q11201 340 aa26.7■■□□□ 1.86
PDLIM2-203ENST00000339162 DDX11L8A8MPP1 907 aa26.69■■□□□ 1.86
PDLIM2-203ENST00000339162 E7EWF7 191 aa26.69■■□□□ 1.86
PDLIM2-203ENST00000339162 ZSCAN31Q96LW9 406 aaPredicted RBP26.69■■□□□ 1.86
PDLIM2-203ENST00000339162 SERPINB2P05120 415 aa26.68■■□□□ 1.86
PDLIM2-203ENST00000339162 MAP3K12Q12852 859 aa26.68■■□□□ 1.86
PDLIM2-203ENST00000339162 ZNF827Q17R98 1081 aa26.68■■□□□ 1.86
PDLIM2-203ENST00000339162 VPS37DQ86XT2 251 aa26.68■■□□□ 1.86
PDLIM2-203ENST00000339162 TFCP2L1Q9NZI6 479 aa26.68■■□□□ 1.86
PDLIM2-203ENST00000339162 Q6ZUG5 572 aa26.67■■□□□ 1.86
PDLIM2-203ENST00000339162 FAM84BQ96KN1 310 aaPredicted RBP26.67■■□□□ 1.86
PDLIM2-203ENST00000339162 SH2B1Q9NRF2 756 aaPredicted RBP26.67■■□□□ 1.86
PDLIM2-203ENST00000339162 CAVIN4Q5BKX8 364 aa26.67■■□□□ 1.86
PDLIM2-203ENST00000339162 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.67■■□□□ 1.86
PDLIM2-203ENST00000339162 A0A1B0GUL6 1792 aa26.67■■□□□ 1.86
PDLIM2-203ENST00000339162 ZNF804BA4D1E1 1349 aa26.67■■□□□ 1.86
PDLIM2-203ENST00000339162 STK3Q13188 491 aa26.66■■□□□ 1.86
PDLIM2-203ENST00000339162 GSE1Q14687 1217 aa26.66■■□□□ 1.86
PDLIM2-203ENST00000339162 ANKRD1Q15327 319 aa26.66■■□□□ 1.86
PDLIM2-203ENST00000339162 TRAK2O60296 914 aa26.66■■□□□ 1.86
PDLIM2-203ENST00000339162 CHST3Q7LGC8 479 aa26.66■■□□□ 1.86
PDLIM2-203ENST00000339162 LRP2BPQ9P2M1 347 aa26.66■■□□□ 1.86
PDLIM2-203ENST00000339162 ABCF2Q9UG63 623 aa26.66■■□□□ 1.86
PDLIM2-203ENST00000339162 SMC3Q9UQE7 1217 aa26.66■■□□□ 1.86
PDLIM2-203ENST00000339162 BRD1O95696 1058 aa26.65■■□□□ 1.86
PDLIM2-203ENST00000339162 APPP05067 770 aa26.65■■□□□ 1.86
PDLIM2-203ENST00000339162 DDR1Q08345 913 aa26.65■■□□□ 1.86
PDLIM2-203ENST00000339162 CLEC17AQ6ZS10 378 aa26.65■■□□□ 1.86
PDLIM2-203ENST00000339162 AIDAQ96BJ3 306 aa26.65■■□□□ 1.86
PDLIM2-203ENST00000339162 ALDH8A1Q9H2A2 487 aaPredicted RBP26.65■■□□□ 1.86
PDLIM2-203ENST00000339162 CTNNA3Q9UI47 895 aa26.65■■□□□ 1.86
PDLIM2-203ENST00000339162 MCTP1Q6DN14 999 aa26.65■■□□□ 1.86
PDLIM2-203ENST00000339162 GNL3LQ9NVN8 582 aaKnown RBP26.65■■□□□ 1.86
PDLIM2-203ENST00000339162 IMMTQ16891 758 aaKnown RBP26.64■■□□□ 1.86
PDLIM2-203ENST00000339162 PLSCR1O15162 318 aa26.63■■□□□ 1.85
PDLIM2-203ENST00000339162 FGD1P98174 961 aa26.63■■□□□ 1.85
PDLIM2-203ENST00000339162 DHX32Q7L7V1 743 aaKnown RBP26.63■■□□□ 1.85
PDLIM2-203ENST00000339162 ANKRD2Q9GZV1 360 aa26.63■■□□□ 1.85
PDLIM2-203ENST00000339162 COL1A1P02452 1464 aaPredicted RBP26.63■■□□□ 1.85
PDLIM2-203ENST00000339162 BRF1Q92994 677 aa26.63■■□□□ 1.85
PDLIM2-203ENST00000339162 GZF1Q9H116 711 aaPredicted RBP26.63■■□□□ 1.85
PDLIM2-203ENST00000339162 MBD4O95243 580 aa26.62■■□□□ 1.85
PDLIM2-203ENST00000339162 GJB2P29033 226 aa26.62■■□□□ 1.85
PDLIM2-203ENST00000339162 GRAPQ13588 217 aa26.62■■□□□ 1.85
PDLIM2-203ENST00000339162 TXNRD3Q86VQ6 643 aa26.62■■□□□ 1.85
PDLIM2-203ENST00000339162 GRAPLQ8TC17 118 aaPredicted RBP26.62■■□□□ 1.85
PDLIM2-203ENST00000339162 STRBPQ96SI9 672 aaKnown RBP26.62■■□□□ 1.85
PDLIM2-203ENST00000339162 ARMT1Q9H993 441 aa26.62■■□□□ 1.85
PDLIM2-203ENST00000339162 ST5P78524 1137 aa26.62■■□□□ 1.85
PDLIM2-203ENST00000339162 FOXD4L6Q3SYB3 417 aaPredicted RBP26.62■■□□□ 1.85
PDLIM2-203ENST00000339162 FOXD4L3Q6VB84 417 aaPredicted RBP26.62■■□□□ 1.85
PDLIM2-203ENST00000339162 HMGB1P09429 215 aaKnown RBP26.61■■□□□ 1.85
PDLIM2-203ENST00000339162 MIGA1Q8NAN2 632 aa26.61■■□□□ 1.85
PDLIM2-203ENST00000339162 RPGRQ92834 1020 aaKnown RBP26.61■■□□□ 1.85
PDLIM2-203ENST00000339162 RGS17Q9UGC6 210 aaPredicted RBP26.61■■□□□ 1.85
PDLIM2-203ENST00000339162 POLRMTO00411 1230 aaKnown RBP26.61■■□□□ 1.85
PDLIM2-203ENST00000339162 FBXO33Q7Z6M2 555 aa26.61■■□□□ 1.85
PDLIM2-203ENST00000339162 ANKIB1Q9P2G1 1089 aa26.61■■□□□ 1.85
PDLIM2-203ENST00000339162 LAMA4Q16363 1823 aa26.6■■□□□ 1.85
PDLIM2-203ENST00000339162 ZNF213O14771 459 aa26.6■■□□□ 1.85
PDLIM2-203ENST00000339162 EXOSC10Q01780 885 aaKnown RBP26.6■■□□□ 1.85
PDLIM2-203ENST00000339162 COL23A1Q86Y22 540 aaPredicted RBP26.6■■□□□ 1.85
PDLIM2-203ENST00000339162 RAI14Q9P0K7 980 aa26.6■■□□□ 1.85
PDLIM2-203ENST00000339162 DOCK2Q92608 1830 aa26.6■■□□□ 1.85
PDLIM2-203ENST00000339162 SYT1P21579 422 aa26.59■■□□□ 1.85
PDLIM2-203ENST00000339162 GOLGA6L22H0YM25 854 aa26.59■■□□□ 1.85
PDLIM2-203ENST00000339162 ADGRA1Q86SQ6 560 aa26.59■■□□□ 1.85
PDLIM2-203ENST00000339162 AKT1S1Q96B36 256 aa26.59■■□□□ 1.85
PDLIM2-203ENST00000339162 HIBADHP31937 336 aaKnown RBP26.58■■□□□ 1.85
PDLIM2-203ENST00000339162 LCORLQ8N3X6 602 aa26.58■■□□□ 1.85
PDLIM2-203ENST00000339162 JAG2Q9Y219 1238 aa26.58■■□□□ 1.85
PDLIM2-203ENST00000339162 PRKAB2O43741 272 aa26.58■■□□□ 1.85
PDLIM2-203ENST00000339162 POTEAQ6S8J7 498 aa26.58■■□□□ 1.85
PDLIM2-203ENST00000339162 NBPF3Q9H094 633 aa26.58■■□□□ 1.85
PDLIM2-203ENST00000339162 DENND2AQ9ULE3 1009 aa26.58■■□□□ 1.85
PDLIM2-203ENST00000339162 CYP7A1P22680 504 aa26.57■■□□□ 1.84
PDLIM2-203ENST00000339162 APOBRQ0VD83 1088 aa26.57■■□□□ 1.84
PDLIM2-203ENST00000339162 CRY2Q49AN0 593 aa26.57■■□□□ 1.84
PDLIM2-203ENST00000339162 GPR101Q96P66 508 aaPredicted RBP26.57■■□□□ 1.84
PDLIM2-203ENST00000339162 EPB41L4AQ9HCS5 686 aaPredicted RBP26.57■■□□□ 1.84
PDLIM2-203ENST00000339162 GPHNQ9NQX3 736 aaPredicted RBP26.57■■□□□ 1.84
PDLIM2-203ENST00000339162 WDR33Q9C0J8 1336 aaKnown RBP26.56■■□□□ 1.84
PDLIM2-203ENST00000339162 STX6O43752 255 aa26.56■■□□□ 1.84
PDLIM2-203ENST00000339162 CHAF1AQ13111 956 aaPredicted RBP26.55■■□□□ 1.84
PDLIM2-203ENST00000339162 PATL2C9JE40 543 aaKnown RBP26.55■■□□□ 1.84
PDLIM2-203ENST00000339162 TBC1D10CQ8IV04 446 aa26.55■■□□□ 1.84
PDLIM2-203ENST00000339162 IFNL3Q8IZI9 196 aa26.54■■□□□ 1.84
PDLIM2-203ENST00000339162 NKX2-3Q8TAU0 364 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms