RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 GNAT2P19087 354 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 KRT83P78385 493 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 NBPF6Q5VWK0 638 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 CCDC129Q6ZRS4 1044 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 NBPF5PQ86XG9 351 aaPredicted RBP15.63■□□□□ 0.09
RTN4-202ENST00000337526 SYCP3Q8IZU3 236 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 KLHDC4Q8TBB5 520 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 NBPF4Q96M43 638 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 CCDC42Q96M95 316 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 FEZ1Q99689 392 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 PODXL2Q9NZ53 605 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 DTNBO60941 627 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 IP6K1Q92551 441 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 DBNDD2Q9BQY9 259 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 HELLSQ9NRZ9 838 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 BABAM1Q9NWV8 329 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 TMEM63CQ9P1W3 806 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 DCAF5Q96JK2 942 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 HOOK3Q86VS8 718 aa15.62■□□□□ 0.09
RTN4-202ENST00000337526 MIGA1Q8NAN2 632 aa15.62■□□□□ 0.09
RTN4-202ENST00000337526 HLA-DOAP06340 250 aa15.62■□□□□ 0.09
RTN4-202ENST00000337526 CALM1P0DP23 149 aa15.62■□□□□ 0.09
RTN4-202ENST00000337526 CALM2P0DP24 149 aa15.62■□□□□ 0.09
RTN4-202ENST00000337526 CALM3P0DP25 149 aa15.62■□□□□ 0.09
RTN4-202ENST00000337526 CCDC91Q7Z6B0 441 aa15.62■□□□□ 0.09
RTN4-202ENST00000337526 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.62■□□□□ 0.09
RTN4-202ENST00000337526 IQUBQ8NA54 791 aa15.62■□□□□ 0.09
RTN4-202ENST00000337526 GUCA1BQ9UMX6 200 aa15.62■□□□□ 0.09
RTN4-202ENST00000337526 TBCAO75347 108 aaKnown RBP15.62■□□□□ 0.09
RTN4-202ENST00000337526 HOXB7P09629 217 aa15.62■□□□□ 0.09
RTN4-202ENST00000337526 KIAA0753Q2KHM9 967 aa15.62■□□□□ 0.09
RTN4-202ENST00000337526 ZNF569Q5MCW4 686 aa15.62■□□□□ 0.09
RTN4-202ENST00000337526 BRD1O95696 1058 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 CAPN2P17655 700 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 TUBB4BP68371 445 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 MAGEB6Q8N7X4 407 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 NLRP3Q96P20 1036 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 EHMT1Q9H9B1 1298 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 PUF60Q9UHX1 559 aaKnown RBP15.61■□□□□ 0.09
RTN4-202ENST00000337526 ELP1O95163 1332 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 MAGEB6P1A0A0J9YX57 407 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 HSPA4P34932 840 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 NAPAP54920 295 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 GSTO1P78417 241 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 CABLES1Q8TDN4 633 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 LEO1Q8WVC0 666 aaPredicted RBP15.61■□□□□ 0.09
RTN4-202ENST00000337526 LLPHQ9BRT6 129 aaKnown RBP15.61■□□□□ 0.09
RTN4-202ENST00000337526 GTPBP4Q9BZE4 634 aaKnown RBP15.61■□□□□ 0.09
RTN4-202ENST00000337526 CLSTN2Q9H4D0 955 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 NCOA5Q9HCD5 579 aaKnown RBP15.61■□□□□ 0.09
RTN4-202ENST00000337526 RSPH14Q9UHP6 348 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 SPATA31E1Q6ZUB1 1445 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 ABCC10Q5T3U5 1492 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 IRS4O14654 1257 aaPredicted RBP15.61■□□□□ 0.09
RTN4-202ENST00000337526 TNNI3KQ59H18 835 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 C17orf53Q8N3J3 647 aaPredicted RBP15.61■□□□□ 0.09
RTN4-202ENST00000337526 BAG1Q99933 345 aaPredicted RBP15.61■□□□□ 0.09
RTN4-202ENST00000337526 NIP7Q9Y221 180 aaKnown RBP eCLIP15.61■□□□□ 0.09
RTN4-202ENST00000337526 LUC7L2Q9Y383 392 aaKnown RBP15.61■□□□□ 0.09
RTN4-202ENST00000337526 FPGT-TNNI3KV9GXZ4 949 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 USP19O94966 1318 aa15.61■□□□□ 0.09
RTN4-202ENST00000337526 A0A1B0GUL7 405 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 UBXN1Q04323 297 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 PPP4R3AQ6IN85 833 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 PTPRTO14522 1441 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 DNMT1P26358 1616 aaKnown RBP15.6■□□□□ 0.09
RTN4-202ENST00000337526 EYA2O00167 538 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 KRT2P35908 639 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 ERMNQ8TAM6 284 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 NGLY1Q96IV0 654 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 CBX8Q9HC52 389 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 CABP5Q9NP86 173 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 PHACTR2O75167 634 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 IVLP07476 585 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 CTNNA2P26232 953 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 SF3B2Q13435 895 aaKnown RBP15.6■□□□□ 0.09
RTN4-202ENST00000337526 OGFRQ9NZT2 677 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 ERO1AQ96HE7 468 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 SAMM50Q9Y512 469 aa15.6■□□□□ 0.09
RTN4-202ENST00000337526 CCDC172P0C7W6 258 aa15.59■□□□□ 0.09
RTN4-202ENST00000337526 ZNF790Q6PG37 636 aa15.59■□□□□ 0.09
RTN4-202ENST00000337526 RIOK3O14730 519 aaKnown RBP15.59■□□□□ 0.09
RTN4-202ENST00000337526 UBE4AQ14139 1066 aa15.59■□□□□ 0.09
RTN4-202ENST00000337526 ANO1Q5XXA6 986 aa15.59■□□□□ 0.09
RTN4-202ENST00000337526 PHF23Q9BUL5 403 aaPredicted RBP15.59■□□□□ 0.09
RTN4-202ENST00000337526 GSPT1P15170 499 aaKnown RBP15.59■□□□□ 0.09
RTN4-202ENST00000337526 RILPL1Q5EBL4 403 aa15.59■□□□□ 0.09
RTN4-202ENST00000337526 CNGA4Q8IV77 575 aa15.59■□□□□ 0.09
RTN4-202ENST00000337526 ZBTB9Q96C00 473 aa15.59■□□□□ 0.09
RTN4-202ENST00000337526 RHOXF2BP0C7M4 288 aa15.59■□□□□ 0.09
RTN4-202ENST00000337526 MCM7P33993 719 aa15.59■□□□□ 0.09
RTN4-202ENST00000337526 SPECC1LQ69YQ0 1117 aa15.59■□□□□ 0.09
RTN4-202ENST00000337526 DZIP3Q86Y13 1208 aaKnown RBP15.59■□□□□ 0.09
RTN4-202ENST00000337526 RHOXF2Q9BQY4 288 aa15.59■□□□□ 0.09
RTN4-202ENST00000337526 RTL9Q8NET4 1388 aa15.58■□□□□ 0.09
RTN4-202ENST00000337526 TUBBP07437 444 aa15.58■□□□□ 0.09
RTN4-202ENST00000337526 ARID5AQ03989 594 aa15.58■□□□□ 0.09
RTN4-202ENST00000337526 ZKSCAN3Q9BRR0 538 aa15.58■□□□□ 0.09
RTN4-202ENST00000337526 METTL22Q9BUU2 404 aaPredicted RBP15.58■□□□□ 0.09
RTN4-202ENST00000337526 C6orf50Q9HD87 102 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms