RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 AKAP2Q9Y2D5 859 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 PAPPAQ13219 1627 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 B4E1Z4 1266 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 ZSCAN30Q86W11 494 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 CMTR1Q8N1G2 835 aaKnown RBP10.43□□□□□ -0.74
SNCA-201ENST00000336904 MPHOSPH8Q99549 860 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 ARMT1Q9H993 441 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 ROBO1Q9Y6N7 1651 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 PDE8BO95263 885 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 ADCY5O95622 1261 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 ANTXR2P58335 489 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 MAGEB6Q8N7X4 407 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 TMEM87AQ8NBN3 555 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 DSCC1Q9BVC3 393 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 TEX13AQ9BXU3 409 aaPredicted RBP10.43□□□□□ -0.74
SNCA-201ENST00000336904 NBPF3Q9H094 633 aa10.43□□□□□ -0.74
SNCA-201ENST00000336904 EXOSC10Q01780 885 aaKnown RBP10.42□□□□□ -0.74
SNCA-201ENST00000336904 RESTQ13127 1097 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 RASGRF1Q13972 1273 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 IMMTQ16891 758 aaKnown RBP10.42□□□□□ -0.74
SNCA-201ENST00000336904 TSGA10IPQ3SY00 556 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 MICU3Q86XE3 530 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 PHKBQ93100 1093 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 GPR108Q9NPR9 543 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 ABCC6O95255 1503 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 PDE8AO60658 829 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 CYB5R4Q7L1T6 521 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 USP28Q96RU2 1077 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 ARID3AQ99856 593 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 BCL11BQ9C0K0 894 aaPredicted RBP10.42□□□□□ -0.74
SNCA-201ENST00000336904 CCDC87Q9NVE4 849 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 ABCF2Q9UG63 623 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 TAF1P21675 1872 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 COL4A1P02462 1669 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 ZNF213O14771 459 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 PHF14O94880 888 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 FDPSP14324 419 aaKnown RBP10.42□□□□□ -0.74
SNCA-201ENST00000336904 PDCP20941 246 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 ADD1P35611 737 aaKnown RBP10.42□□□□□ -0.74
SNCA-201ENST00000336904 RALYLQ86SE5 291 aaKnown RBP10.42□□□□□ -0.74
SNCA-201ENST00000336904 VSIG10Q8N0Z9 540 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 VGLL2Q8N8G2 317 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 APPBP2Q92624 585 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 NUP62CLQ9H1M0 184 aa10.42□□□□□ -0.74
SNCA-201ENST00000336904 PFKFB2O60825 505 aa10.41□□□□□ -0.74
SNCA-201ENST00000336904 MBD4O95243 580 aa10.41□□□□□ -0.74
SNCA-201ENST00000336904 PDE6AP16499 860 aa10.41□□□□□ -0.74
SNCA-201ENST00000336904 GYG1P46976 350 aa10.41□□□□□ -0.74
SNCA-201ENST00000336904 PDLIM2Q96JY6 352 aa10.41□□□□□ -0.74
SNCA-201ENST00000336904 TNMDQ9H2S6 317 aa10.41□□□□□ -0.74
SNCA-201ENST00000336904 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.41□□□□□ -0.74
SNCA-201ENST00000336904 NEDD4P46934 1319 aa10.41□□□□□ -0.74
SNCA-201ENST00000336904 EVX2Q03828 476 aa10.41□□□□□ -0.74
SNCA-201ENST00000336904 TRIM28Q13263 835 aaKnown RBP10.41□□□□□ -0.74
SNCA-201ENST00000336904 ILDR1Q86SU0 546 aaPredicted RBP10.41□□□□□ -0.74
SNCA-201ENST00000336904 GOLPH3LQ9H4A5 285 aa10.41□□□□□ -0.74
SNCA-201ENST00000336904 SRP68Q9UHB9 627 aaKnown RBP10.41□□□□□ -0.74
SNCA-201ENST00000336904 DOT1LQ8TEK3 1739 aa10.41□□□□□ -0.74
SNCA-201ENST00000336904 DISP2A7MBM2 1401 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 NHSL1Q5SYE7 1610 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 SPATA31A1Q5TZJ5 1347 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 EIF5P55010 431 aaKnown RBP10.4□□□□□ -0.74
SNCA-201ENST00000336904 ANO6Q4KMQ2 910 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 ZNF34Q8IZ26 560 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 AIDAQ96BJ3 306 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 DNAJC25Q9H1X3 360 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 R3HCC1Q9Y3T6 440 aaKnown RBP10.4□□□□□ -0.74
SNCA-201ENST00000336904 TACC3Q9Y6A5 838 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 NWD2Q9ULI1 1742 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 KLRK1P26718 216 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 ADD2P35612 726 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 IL6STP40189 918 aaPredicted RBP10.4□□□□□ -0.74
SNCA-201ENST00000336904 ERFEQ4G0M1 354 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 ISM2Q6H9L7 571 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 AMIGO3Q86WK7 504 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 SDR42E1Q8WUS8 393 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 NUP98P52948 1817 aa10.4□□□□□ -0.74
SNCA-201ENST00000336904 UTRNP46939 3433 aa10.4□□□□□ -0.75
SNCA-201ENST00000336904 CYP2D7A0A087X1C5 515 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 GTF2E1P29083 439 aaPredicted RBP10.39□□□□□ -0.75
SNCA-201ENST00000336904 ME1P48163 572 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 SPATA5Q8NB90 893 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 UTP14AQ9BVJ6 771 aaKnown RBP10.39□□□□□ -0.75
SNCA-201ENST00000336904 CARMIL3Q8ND23 1372 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 COL16A1Q07092 1604 aaPredicted RBP10.39□□□□□ -0.75
SNCA-201ENST00000336904 CPLX1O14810 134 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 CAMTA2O94983 1202 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 TYRO3Q06418 890 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 LCORLQ8N3X6 602 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 EPB41L4AQ9HCS5 686 aaPredicted RBP10.39□□□□□ -0.75
SNCA-201ENST00000336904 HPS5Q9UPZ3 1129 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 MYH14Q7Z406 1995 aaKnown RBP10.39□□□□□ -0.75
SNCA-201ENST00000336904 A0A1B0GVL5 298 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 hCG_1642624A0A1W2PR95 340 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 KIF28PB7ZC32 967 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 PUM3Q15397 648 aaKnown RBP10.39□□□□□ -0.75
SNCA-201ENST00000336904 MAP3K11Q16584 847 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 NFXL1Q6ZNB6 911 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 ADGRA1Q86SQ6 560 aa10.39□□□□□ -0.75
SNCA-201ENST00000336904 MB21D2Q8IYB1 491 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms