RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 TNIP1Q15025 636 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 DNAJC10Q8IXB1 793 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 THUMPD2Q9BTF0 503 aaKnown RBP12.69□□□□□ -0.38
LRAT-201ENST00000336356 CARD14Q9BXL6 1004 aa12.69□□□□□ -0.38
LRAT-201ENST00000336356 CLGNO14967 610 aa12.68□□□□□ -0.38
LRAT-201ENST00000336356 SYT10Q6XYQ8 523 aa12.68□□□□□ -0.38
LRAT-201ENST00000336356 CCDC47Q96A33 483 aaKnown RBP12.68□□□□□ -0.38
LRAT-201ENST00000336356 KCNQ2O43526 872 aa12.68□□□□□ -0.38
LRAT-201ENST00000336356 FSIP1Q8NA03 581 aa12.68□□□□□ -0.38
LRAT-201ENST00000336356 PPM1EQ8WY54 764 aa12.68□□□□□ -0.38
LRAT-201ENST00000336356 GOLGA1Q92805 767 aa12.68□□□□□ -0.38
LRAT-201ENST00000336356 GOLGA6L10A6NI86 522 aa12.68□□□□□ -0.38
LRAT-201ENST00000336356 GADD45BO75293 160 aaPredicted RBP12.67□□□□□ -0.38
LRAT-201ENST00000336356 CLEC4GQ6UXB4 293 aa12.67□□□□□ -0.38
LRAT-201ENST00000336356 MAST3O60307 1309 aa12.67□□□□□ -0.38
LRAT-201ENST00000336356 SRGAP3O43295 1099 aa12.67□□□□□ -0.38
LRAT-201ENST00000336356 TERF2Q15554 542 aa12.67□□□□□ -0.38
LRAT-201ENST00000336356 ZSCAN26Q16670 478 aa12.67□□□□□ -0.38
LRAT-201ENST00000336356 ATP2B3Q16720 1220 aa12.67□□□□□ -0.38
LRAT-201ENST00000336356 NUTM1Q86Y26 1132 aa12.67□□□□□ -0.38
LRAT-201ENST00000336356 MCM6Q14566 821 aa12.67□□□□□ -0.38
LRAT-201ENST00000336356 CCDC93Q567U6 631 aa12.67□□□□□ -0.38
LRAT-201ENST00000336356 CT47A1Q5JQC4 288 aaPredicted RBP12.67□□□□□ -0.38
LRAT-201ENST00000336356 ZSCAN29Q8IWY8 852 aaPredicted RBP12.67□□□□□ -0.38
LRAT-201ENST00000336356 MYCBPQ99417 103 aaPredicted RBP12.67□□□□□ -0.38
LRAT-201ENST00000336356 NACAP1Q9BZK3 213 aa12.67□□□□□ -0.38
LRAT-201ENST00000336356 CENPHQ9H3R5 247 aa12.67□□□□□ -0.38
LRAT-201ENST00000336356 ELP1O95163 1332 aa12.67□□□□□ -0.38
LRAT-201ENST00000336356 NBPF11Q86T75 865 aa12.66□□□□□ -0.38
LRAT-201ENST00000336356 TTLL6Q8N841 843 aa12.66□□□□□ -0.38
LRAT-201ENST00000336356 PSDA5PKW4 1024 aaPredicted RBP12.66□□□□□ -0.38
LRAT-201ENST00000336356 PKP1Q13835 747 aa12.66□□□□□ -0.38
LRAT-201ENST00000336356 DPP8Q6V1X1 898 aaPredicted RBP12.66□□□□□ -0.38
LRAT-201ENST00000336356 PLBD2Q8NHP8 589 aa12.66□□□□□ -0.38
LRAT-201ENST00000336356 ZNF215Q9UL58 517 aaPredicted RBP12.66□□□□□ -0.38
LRAT-201ENST00000336356 GOLGA6L7A0A1B0GV03 622 aa12.66□□□□□ -0.38
LRAT-201ENST00000336356 PATL2C9JE40 543 aaKnown RBP12.66□□□□□ -0.38
LRAT-201ENST00000336356 COPS6Q7L5N1 327 aa12.66□□□□□ -0.38
LRAT-201ENST00000336356 XAGE3Q8WTP9 111 aa12.66□□□□□ -0.38
LRAT-201ENST00000336356 PLEKHG2Q9H7P9 1386 aa12.66□□□□□ -0.38
LRAT-201ENST00000336356 KSR2Q6VAB6 950 aa12.66□□□□□ -0.38
LRAT-201ENST00000336356 MICALL1Q8N3F8 863 aa12.66□□□□□ -0.38
LRAT-201ENST00000336356 CCDC12Q8WUD4 166 aaPredicted RBP12.66□□□□□ -0.38
LRAT-201ENST00000336356 ZNHIT6Q9NWK9 470 aaKnown RBP12.66□□□□□ -0.38
LRAT-201ENST00000336356 CRKLP46109 303 aaKnown RBP12.65□□□□□ -0.38
LRAT-201ENST00000336356 DDX41Q9UJV9 622 aaKnown RBP12.65□□□□□ -0.38
LRAT-201ENST00000336356 CEP112Q8N8E3 955 aa12.65□□□□□ -0.38
LRAT-201ENST00000336356 AIDAQ96BJ3 306 aa12.65□□□□□ -0.38
LRAT-201ENST00000336356 PYCARDQ9ULZ3 195 aa12.65□□□□□ -0.38
LRAT-201ENST00000336356 IQCA1LA6NCM1 817 aa12.65□□□□□ -0.38
LRAT-201ENST00000336356 CD2BP2O95400 341 aaKnown RBP12.65□□□□□ -0.38
LRAT-201ENST00000336356 LARP6Q9BRS8 491 aaKnown RBP12.65□□□□□ -0.38
LRAT-201ENST00000336356 VPS18Q9P253 973 aa12.65□□□□□ -0.38
LRAT-201ENST00000336356 EBAG9O00559 213 aa12.65□□□□□ -0.38
LRAT-201ENST00000336356 ZBTB7AO95365 584 aa12.65□□□□□ -0.38
LRAT-201ENST00000336356 EVCP57679 992 aa12.65□□□□□ -0.38
LRAT-201ENST00000336356 MSL1Q68DK7 614 aa12.65□□□□□ -0.38
LRAT-201ENST00000336356 CBX8Q9HC52 389 aa12.65□□□□□ -0.38
LRAT-201ENST00000336356 KIAA1210Q9ULL0 1709 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 ZFP91Q96JP5 570 aaPredicted RBP12.64□□□□□ -0.39
LRAT-201ENST00000336356 MBIPQ9NS73 344 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 SPTLC3Q9NUV7 552 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 MKRN1Q9UHC7 482 aaKnown RBP12.64□□□□□ -0.39
LRAT-201ENST00000336356 BAG3O95817 575 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 TDO2P48775 406 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 FAM182BQ5T319 152 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 VAMP4O75379 141 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 SERPINB2P05120 415 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 BRPF1P55201 1214 aaPredicted RBP12.64□□□□□ -0.39
LRAT-201ENST00000336356 LDHAL6AQ6ZMR3 332 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 HDXQ7Z353 690 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 ERICH2A1L162 156 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 ATP8B1O43520 1251 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 CERS3Q8IU89 383 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 IMPACTQ9P2X3 320 aa12.64□□□□□ -0.39
LRAT-201ENST00000336356 DZIP1Q86YF9 867 aaKnown RBP12.63□□□□□ -0.39
LRAT-201ENST00000336356 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 ERVV-1B6SEH8 477 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 AK2P54819 239 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 TCIRG1Q13488 830 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 AOPEPQ8N6M6 819 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 MMP10P09238 476 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 NPR1P16066 1061 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 CHMLP26374 656 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 FLIIQ13045 1269 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 CEP85Q6P2H3 762 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 MIS18AQ9NYP9 233 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 IRS4O14654 1257 aaPredicted RBP12.63□□□□□ -0.39
LRAT-201ENST00000336356 BBOX1O75936 387 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 UQCRFS1P1P0C7P4 283 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 NAP1L1P55209 391 aaKnown RBP12.63□□□□□ -0.39
LRAT-201ENST00000336356 CCDC181Q5TID7 509 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 LINS1Q8NG48 757 aa12.63□□□□□ -0.39
LRAT-201ENST00000336356 NSFL1CQ9UNZ2 370 aaKnown RBP12.63□□□□□ -0.39
LRAT-201ENST00000336356 ITSN1Q15811 1721 aa12.62□□□□□ -0.39
LRAT-201ENST00000336356 HMGB1P09429 215 aaKnown RBP12.62□□□□□ -0.39
LRAT-201ENST00000336356 FBLN1P23142 703 aa12.62□□□□□ -0.39
LRAT-201ENST00000336356 NFXL1Q6ZNB6 911 aa12.62□□□□□ -0.39
LRAT-201ENST00000336356 CLSTN2Q9H4D0 955 aa12.62□□□□□ -0.39
LRAT-201ENST00000336356 GJA3Q9Y6H8 435 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms