RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 ANTXR2P58335 489 aa17.41■□□□□ 0.38
UBA1-201ENST00000335972 FSIP1Q8NA03 581 aa17.41■□□□□ 0.38
UBA1-201ENST00000335972 PIBF1Q8WXW3 757 aa17.41■□□□□ 0.38
UBA1-201ENST00000335972 MYL10Q9BUA6 226 aa17.41■□□□□ 0.38
UBA1-201ENST00000335972 RFX7Q2KHR2 1363 aa17.41■□□□□ 0.38
UBA1-201ENST00000335972 UBE2Q2LH0YL09 131 aa17.4■□□□□ 0.38
UBA1-201ENST00000335972 GIGYF2Q6Y7W6 1299 aaKnown RBP17.4■□□□□ 0.38
UBA1-201ENST00000335972 RALYLQ86SE5 291 aaKnown RBP17.4■□□□□ 0.38
UBA1-201ENST00000335972 ZSCAN16Q9H4T2 348 aaPredicted RBP17.4■□□□□ 0.38
UBA1-201ENST00000335972 MAP3K15Q6ZN16 1313 aa17.4■□□□□ 0.38
UBA1-201ENST00000335972 WWC3Q9ULE0 1092 aa17.4■□□□□ 0.38
UBA1-201ENST00000335972 IQSEC3Q9UPP2 1182 aaPredicted RBP17.4■□□□□ 0.38
UBA1-201ENST00000335972 LAMA4Q16363 1823 aa17.4■□□□□ 0.38
UBA1-201ENST00000335972 CARMIL3Q8ND23 1372 aa17.4■□□□□ 0.38
UBA1-201ENST00000335972 ZNF213O14771 459 aa17.4■□□□□ 0.38
UBA1-201ENST00000335972 RIPOR2Q9Y4F9 1068 aa17.4■□□□□ 0.38
UBA1-201ENST00000335972 CLIC4Q9Y696 253 aa17.4■□□□□ 0.38
UBA1-201ENST00000335972 ORC3Q9UBD5 711 aaPredicted RBP17.39■□□□□ 0.37
UBA1-201ENST00000335972 CPLX1O14810 134 aa17.39■□□□□ 0.37
UBA1-201ENST00000335972 APPBP2Q92624 585 aa17.39■□□□□ 0.37
UBA1-201ENST00000335972 LAMB4A4D0S4 1761 aa17.39■□□□□ 0.37
UBA1-201ENST00000335972 ANKRD18BA2A2Z9 1011 aa17.39■□□□□ 0.37
UBA1-201ENST00000335972 ISM2Q6H9L7 571 aa17.39■□□□□ 0.37
UBA1-201ENST00000335972 LLPHQ9BRT6 129 aaKnown RBP17.39■□□□□ 0.37
UBA1-201ENST00000335972 CSF1RP07333 972 aa17.38■□□□□ 0.37
UBA1-201ENST00000335972 CTSWP56202 376 aa17.38■□□□□ 0.37
UBA1-201ENST00000335972 HMGN5P82970 282 aaKnown RBP17.38■□□□□ 0.37
UBA1-201ENST00000335972 ARID5BQ14865 1188 aa17.38■□□□□ 0.37
UBA1-201ENST00000335972 TBC1D10CQ8IV04 446 aa17.38■□□□□ 0.37
UBA1-201ENST00000335972 CCDC73Q6ZRK6 1079 aa17.38■□□□□ 0.37
UBA1-201ENST00000335972 C8orf76Q96K31 380 aa17.38■□□□□ 0.37
UBA1-201ENST00000335972 SEC31BQ9NQW1 1179 aa17.38■□□□□ 0.37
UBA1-201ENST00000335972 HPS5Q9UPZ3 1129 aa17.38■□□□□ 0.37
UBA1-201ENST00000335972 BIN1O00499 593 aa17.38■□□□□ 0.37
UBA1-201ENST00000335972 SF3A1Q15459 793 aaKnown RBP17.38■□□□□ 0.37
UBA1-201ENST00000335972 PHKBQ93100 1093 aa17.38■□□□□ 0.37
UBA1-201ENST00000335972 NBPF3Q9H094 633 aa17.38■□□□□ 0.37
UBA1-201ENST00000335972 NUP188Q5SRE5 1749 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 B4E1Z4 1266 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 CYP19A1P11511 503 aaPredicted RBP17.37■□□□□ 0.37
UBA1-201ENST00000335972 NAA16Q6N069 864 aaPredicted RBP17.37■□□□□ 0.37
UBA1-201ENST00000335972 DZIP3Q86Y13 1208 aaKnown RBP17.37■□□□□ 0.37
UBA1-201ENST00000335972 PCDHA7Q9UN72 937 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 ZNF532Q9HCE3 1301 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 KIF28PB7ZC32 967 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 CYB5R4Q7L1T6 521 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 MICU3Q86XE3 530 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 MB21D2Q8IYB1 491 aaPredicted RBP17.37■□□□□ 0.37
UBA1-201ENST00000335972 AGXT2Q9BYV1 514 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 CTNNA3Q9UI47 895 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 RIC1Q4ADV7 1423 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 UBN2Q6ZU65 1347 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 CCDC102BQ68D86 513 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 SMIM5Q71RC9 77 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 CCDC82Q8N4S0 544 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 ZNF274Q96GC6 653 aaPredicted RBP17.37■□□□□ 0.37
UBA1-201ENST00000335972 RCOR1Q9UKL0 485 aa17.37■□□□□ 0.37
UBA1-201ENST00000335972 ADAMTS2O95450 1211 aa17.36■□□□□ 0.37
UBA1-201ENST00000335972 MARCKSP29966 332 aaPredicted RBP17.36■□□□□ 0.37
UBA1-201ENST00000335972 TNS2Q63HR2 1409 aa17.36■□□□□ 0.37
UBA1-201ENST00000335972 SALL1Q9NSC2 1324 aa17.36■□□□□ 0.37
UBA1-201ENST00000335972 RRP9O43818 475 aaKnown RBP17.36■□□□□ 0.37
UBA1-201ENST00000335972 KINO60870 393 aaKnown RBP17.36■□□□□ 0.37
UBA1-201ENST00000335972 SNW1Q13573 536 aaKnown RBP17.36■□□□□ 0.37
UBA1-201ENST00000335972 STK38Q15208 465 aa17.36■□□□□ 0.37
UBA1-201ENST00000335972 NCOA7Q8NI08 942 aa17.36■□□□□ 0.37
UBA1-201ENST00000335972 CTDSPL2Q05D32 466 aa17.35■□□□□ 0.37
UBA1-201ENST00000335972 CCDC144BQ3MJ40 725 aa17.35■□□□□ 0.37
UBA1-201ENST00000335972 RRP12Q5JTH9 1297 aaKnown RBP17.35■□□□□ 0.37
UBA1-201ENST00000335972 TOMM22Q9NS69 142 aa17.35■□□□□ 0.37
UBA1-201ENST00000335972 WTIPA6NIX2 430 aaPredicted RBP17.35■□□□□ 0.37
UBA1-201ENST00000335972 ZNF75DP51815 510 aa17.35■□□□□ 0.37
UBA1-201ENST00000335972 KCNQ4P56696 695 aa17.35■□□□□ 0.37
UBA1-201ENST00000335972 SDF4Q9BRK5 362 aa17.35■□□□□ 0.37
UBA1-201ENST00000335972 ZKSCAN3Q9BRR0 538 aa17.35■□□□□ 0.37
UBA1-201ENST00000335972 KIAA1524Q8TCG1 905 aa17.35■□□□□ 0.37
UBA1-201ENST00000335972 ZNF396Q96N95 335 aaPredicted RBP17.35■□□□□ 0.37
UBA1-201ENST00000335972 PARP4Q9UKK3 1724 aaKnown RBP17.35■□□□□ 0.37
UBA1-201ENST00000335972 XIRP1Q702N8 1843 aaKnown RBP17.34■□□□□ 0.37
UBA1-201ENST00000335972 PDIA4P13667 645 aaKnown RBP17.34■□□□□ 0.37
UBA1-201ENST00000335972 NDUFA8P51970 172 aa17.34■□□□□ 0.37
UBA1-201ENST00000335972 PRKAB2O43741 272 aa17.34■□□□□ 0.37
UBA1-201ENST00000335972 ADD2P35612 726 aa17.34■□□□□ 0.37
UBA1-201ENST00000335972 TRIM28Q13263 835 aaKnown RBP17.34■□□□□ 0.37
UBA1-201ENST00000335972 KIF3AQ9Y496 699 aa17.34■□□□□ 0.37
UBA1-201ENST00000335972 GOLGA6L19H0YKK7 550 aa17.34■□□□□ 0.37
UBA1-201ENST00000335972 PDE8BO95263 885 aa17.34■□□□□ 0.37
UBA1-201ENST00000335972 PDE6AP16499 860 aa17.34■□□□□ 0.37
UBA1-201ENST00000335972 CLIP2Q9UDT6 1046 aa17.34■□□□□ 0.37
UBA1-201ENST00000335972 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.37
UBA1-201ENST00000335972 ZFYP08048 801 aaPredicted RBP17.33■□□□□ 0.37
UBA1-201ENST00000335972 NFXL1Q6ZNB6 911 aa17.33■□□□□ 0.37
UBA1-201ENST00000335972 CMTR1Q8N1G2 835 aaKnown RBP17.33■□□□□ 0.37
UBA1-201ENST00000335972 ARMT1Q9H993 441 aa17.33■□□□□ 0.37
UBA1-201ENST00000335972 EXOC5O00471 708 aa17.33■□□□□ 0.36
UBA1-201ENST00000335972 TRDNQ13061 729 aa17.33■□□□□ 0.36
UBA1-201ENST00000335972 RBM43Q6ZSC3 357 aaKnown RBP17.33■□□□□ 0.36
UBA1-201ENST00000335972 FILIP1Q7Z7B0 1213 aa17.33■□□□□ 0.36
UBA1-201ENST00000335972 MAGEB6Q8N7X4 407 aa17.33■□□□□ 0.36
UBA1-201ENST00000335972 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.33■□□□□ 0.362e-7■■■■□ 26.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms