RNA–Protein interactions for RNA: ENST00000334186.8

PPFIA3-201, Transcript of PTPRF interacting protein alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIA3, Length 4,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-201ENST00000334186 DNA2P51530 1060 aa18.79■□□□□ 0.6
PPFIA3-201ENST00000334186 MAP2K1Q02750 393 aaPredicted RBP18.79■□□□□ 0.6
PPFIA3-201ENST00000334186 TDRD12Q587J7 1177 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-201ENST00000334186 HSP90AA4PQ58FG1 418 aa18.79■□□□□ 0.6
PPFIA3-201ENST00000334186 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.79■□□□□ 0.6
PPFIA3-201ENST00000334186 USP19O94966 1318 aa18.79■□□□□ 0.6
PPFIA3-201ENST00000334186 SEPT7Q16181 437 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-201ENST00000334186 KRBA2Q6ZNG9 492 aa18.79■□□□□ 0.6
PPFIA3-201ENST00000334186 PNMA6EA0A0J9YXQ4 647 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 EBAG9O00559 213 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 N4BP3O15049 544 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 CEP112Q8N8E3 955 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 BCCIPQ9P287 314 aaKnown RBP eCLIP18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 PLXNC1O60486 1568 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 ATP6V1AP38606 617 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 ELF2Q15723 593 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 SPECC1Q5M775 1068 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 IFFO1Q0D2I5 559 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 NAA16Q6N069 864 aaPredicted RBP18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 JADE2Q9NQC1 790 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 IFNKQ9P0W0 207 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 ABCC3O15438 1527 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 SGSM2O43147 1006 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 HLTFQ14527 1009 aaKnown RBP eCLIP18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 CUL5Q93034 780 aa18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 NIP7Q9Y221 180 aaKnown RBP eCLIP18.78■□□□□ 0.6
PPFIA3-201ENST00000334186 DZIP3Q86Y13 1208 aaKnown RBP18.77■□□□□ 0.6
PPFIA3-201ENST00000334186 KIAA0232Q92628 1395 aa18.77■□□□□ 0.6
PPFIA3-201ENST00000334186 EVCP57679 992 aa18.77■□□□□ 0.6
PPFIA3-201ENST00000334186 SLC4A8Q2Y0W8 1093 aa18.77■□□□□ 0.6
PPFIA3-201ENST00000334186 CCDC113Q9H0I3 377 aa18.77■□□□□ 0.6
PPFIA3-201ENST00000334186 RTL1A6NKG5 1358 aa18.77■□□□□ 0.6
PPFIA3-201ENST00000334186 CNKSR2Q8WXI2 1034 aa18.77■□□□□ 0.59
PPFIA3-201ENST00000334186 SIRT1Q96EB6 747 aa18.77■□□□□ 0.59
PPFIA3-201ENST00000334186 LGR6Q9HBX8 967 aa18.77■□□□□ 0.59
PPFIA3-201ENST00000334186 ARAP3Q8WWN8 1544 aa18.77■□□□□ 0.59
PPFIA3-201ENST00000334186 IRS4O14654 1257 aaPredicted RBP18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 NLRP3Q96P20 1036 aa18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 METTL22Q9BUU2 404 aaPredicted RBP18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 CCDC175P0C221 793 aa18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 FAM114A1Q8IWE2 563 aa18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 ZBTB9Q96C00 473 aa18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 UTP14AQ9BVJ6 771 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 NAA15Q9BXJ9 866 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 RMND1Q9NWS8 449 aa18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 EFCAB6Q5THR3 1501 aa18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 RFC4P35249 363 aa18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 MATR3P43243 847 aaKnown RBP eCLIP18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 GSTO1P78417 241 aa18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 ABCC4O15439 1325 aa18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 GADD45BO75293 160 aaPredicted RBP18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 AFMP43652 599 aa18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 KDM5AP29375 1690 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-201ENST00000334186 GNAT2P19087 354 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 NF2P35240 595 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 ANTXR1Q9H6X2 564 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 KIF24Q5T7B8 1368 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 MYOM2P54296 1465 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 NBPF11Q86T75 865 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 HELBQ8NG08 1087 aaPredicted RBP18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 HELLSQ9NRZ9 838 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 SNX14Q9Y5W7 946 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 GNAQP50148 359 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 TUBB4BP68371 445 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 CCDC40Q4G0X9 1142 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 BRAPQ7Z569 592 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 TRIM47Q96LD4 638 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 TRIM75PA6NK02 468 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 CCDC178Q5BJE1 867 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 PLBD2Q8NHP8 589 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 ACSBG1Q96GR2 724 aa18.75■□□□□ 0.59
PPFIA3-201ENST00000334186 PCDH11XQ9BZA7 1347 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 PCDH11YQ9BZA8 1340 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 EYA2O00167 538 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 TIMM10P62072 90 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 SPAG1Q07617 926 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 TNNI3KQ59H18 835 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 EHBP1Q8NDI1 1231 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 FPGT-TNNI3KV9GXZ4 949 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 RPS6KB1P23443 525 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 CKAP4Q07065 602 aaKnown RBP18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 SETDB2Q96T68 719 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 A0A1B0GUL7 405 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 DMTNQ08495 405 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 MAATS1Q7Z4T9 603 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 ALS2CR12Q96Q35 445 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 CTAGE9A4FU28 777 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 HLA-DOAP06340 250 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 DDB1Q16531 1140 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 RRAGBQ5VZM2 374 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 DBNDD2Q9BQY9 259 aa18.74■□□□□ 0.59
PPFIA3-201ENST00000334186 TSPY3P0CV98 308 aa18.73■□□□□ 0.59
PPFIA3-201ENST00000334186 TSPY8P0CW00 308 aa18.73■□□□□ 0.59
PPFIA3-201ENST00000334186 ZNF75DP51815 510 aa18.73■□□□□ 0.59
PPFIA3-201ENST00000334186 SLC27A2O14975 620 aa18.73■□□□□ 0.59
PPFIA3-201ENST00000334186 HSF2BPO75031 334 aa18.73■□□□□ 0.59
PPFIA3-201ENST00000334186 TRMT2AQ8IZ69 625 aaKnown RBP18.73■□□□□ 0.59
PPFIA3-201ENST00000334186 KLHDC4Q8TBB5 520 aa18.73■□□□□ 0.59
PPFIA3-201ENST00000334186 CTAGE1Q96RT6 745 aa18.73■□□□□ 0.59
PPFIA3-201ENST00000334186 TUBBP07437 444 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms