RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 SLC39A6Q13433 755 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 MUM1L1Q5H9M0 696 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 SARM1Q6SZW1 724 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 ILDR1Q86SU0 546 aaPredicted RBP12.87□□□□□ -0.35
CCDC87-201ENST00000333861 GDAP1L1Q96MZ0 367 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
CCDC87-201ENST00000333861 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 WDR24Q96S15 920 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 G3BP1Q13283 466 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC87-201ENST00000333861 RNF20Q5VTR2 975 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 FBXO18Q8NFZ0 1043 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 CABLES1Q8TDN4 633 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 CPLX3Q8WVH0 158 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 SLAIN2Q9P270 581 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 DENND2AQ9ULE3 1009 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 JRKLQ9Y4A0 524 aa12.87□□□□□ -0.35
CCDC87-201ENST00000333861 MTF1Q14872 753 aa12.86□□□□□ -0.35
CCDC87-201ENST00000333861 ZRSR1Q15695 479 aaKnown RBP12.86□□□□□ -0.35
CCDC87-201ENST00000333861 MST1RQ04912 1400 aa12.86□□□□□ -0.35
CCDC87-201ENST00000333861 FOXN1O15353 648 aa12.86□□□□□ -0.35
CCDC87-201ENST00000333861 ZNF827Q17R98 1081 aa12.86□□□□□ -0.35
CCDC87-201ENST00000333861 LONRF3Q496Y0 759 aa12.86□□□□□ -0.35
CCDC87-201ENST00000333861 TRIM65Q6PJ69 517 aa12.86□□□□□ -0.35
CCDC87-201ENST00000333861 EVI5LQ96CN4 794 aa12.86□□□□□ -0.35
CCDC87-201ENST00000333861 IL17RAQ96F46 866 aa12.86□□□□□ -0.35
CCDC87-201ENST00000333861 KAZALD1Q96I82 304 aa12.86□□□□□ -0.35
CCDC87-201ENST00000333861 TSGA10IPQ3SY00 556 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 CREBRFQ8IUR6 639 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 CEP57L1Q8IYX8 460 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 NEUROD6Q96NK8 337 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 SNRKQ9NRH2 765 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 PARP3Q9Y6F1 533 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 SRCAPQ6ZRS2 3230 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 ATP5J2-PTCD1G3V325 749 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
CCDC87-201ENST00000333861 TAF5LO75529 589 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 ATP2B1P20020 1258 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 PDCP20941 246 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 ZC3H6P61129 1189 aaKnown RBP12.85□□□□□ -0.35
CCDC87-201ENST00000333861 GNG11P61952 73 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 BRINP3Q76B58 766 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 TRMT44Q8IYL2 757 aaKnown RBP12.85□□□□□ -0.35
CCDC87-201ENST00000333861 ARFGAP3Q9NP61 516 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 APPP05067 770 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 PSMA5P28066 241 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 CFAP100Q494V2 611 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 TTC31Q49AM3 519 aaPredicted RBP12.85□□□□□ -0.35
CCDC87-201ENST00000333861 CLIC6Q96NY7 704 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 SRRTQ9BXP5 876 aaKnown RBP12.85□□□□□ -0.35
CCDC87-201ENST00000333861 FUT8Q9BYC5 575 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 HDAC5Q9UQL6 1122 aa12.85□□□□□ -0.35
CCDC87-201ENST00000333861 SERPINC1P01008 464 aa12.84□□□□□ -0.35
CCDC87-201ENST00000333861 PNOCQ13519 176 aa12.84□□□□□ -0.35
CCDC87-201ENST00000333861 GOLGA5Q8TBA6 731 aa12.84□□□□□ -0.35
CCDC87-201ENST00000333861 AK7Q96M32 723 aa12.84□□□□□ -0.35
CCDC87-201ENST00000333861 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
CCDC87-201ENST00000333861 ANO10Q9NW15 660 aa12.84□□□□□ -0.35
CCDC87-201ENST00000333861 CWC15Q9P013 229 aaKnown RBP12.84□□□□□ -0.35
CCDC87-201ENST00000333861 NRKQ7Z2Y5 1582 aa12.84□□□□□ -0.35
CCDC87-201ENST00000333861 ACTN2P35609 894 aa12.84□□□□□ -0.35
CCDC87-201ENST00000333861 FKBP15Q5T1M5 1219 aa12.84□□□□□ -0.35
CCDC87-201ENST00000333861 GPIHBP1Q8IV16 184 aa12.84□□□□□ -0.35
CCDC87-201ENST00000333861 LZTFL1Q9NQ48 299 aa12.84□□□□□ -0.35
CCDC87-201ENST00000333861 FAN1Q9Y2M0 1017 aa12.84□□□□□ -0.35
CCDC87-201ENST00000333861 EIF3CLB5ME19 914 aaKnown RBP12.83□□□□□ -0.36
CCDC87-201ENST00000333861 GCP02774 474 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 TFCP2Q12800 502 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 STK38Q15208 465 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 KCTD19Q17RG1 926 aaPredicted RBP12.83□□□□□ -0.36
CCDC87-201ENST00000333861 LEKR1Q6ZMV7 388 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 TOGARAM2Q6ZUX3 1019 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 NSUN7Q8NE18 718 aaKnown RBP12.83□□□□□ -0.36
CCDC87-201ENST00000333861 EIF3CQ99613 913 aaKnown RBP12.83□□□□□ -0.36
CCDC87-201ENST00000333861 USP31Q70CQ4 1352 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 BTBD11A6QL63 1104 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 GSDMDP57764 484 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 MTX1Q13505 466 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 LONRF2Q1L5Z9 754 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 GRAMD1CQ8IYS0 662 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 NKX2-3Q8TAU0 364 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 PIK3C2AO00443 1686 aa12.83□□□□□ -0.36
CCDC87-201ENST00000333861 KIF2AO00139 706 aaPredicted RBP12.82□□□□□ -0.36
CCDC87-201ENST00000333861 GOLIM4O00461 696 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 ABL1P00519 1130 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 IBSPP21815 317 aaPredicted RBP12.82□□□□□ -0.36
CCDC87-201ENST00000333861 FANCCQ00597 558 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 PPP2R3AQ06190 1150 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 CCDC82Q8N4S0 544 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 UBXN6Q9BZV1 441 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 TUBGCP6Q96RT7 1819 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 TTC41PQ6P2S7 1318 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 KIF28PB7ZC32 967 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 RHOXF2BP0C7M4 288 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 EIF4A1P60842 406 aaKnown RBP12.82□□□□□ -0.36
CCDC87-201ENST00000333861 TIMM10P62072 90 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 DHX58Q96C10 678 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 GPATCH3Q96I76 525 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 RHOXF2Q9BQY4 288 aa12.82□□□□□ -0.36
CCDC87-201ENST00000333861 OSBPL5Q9H0X9 879 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms