RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 CWC22Q9HCG8 908 aaKnown RBP10.49□□□□□ -0.73
LSAMP-201ENST00000333617 ZBTB1Q9Y2K1 713 aa10.49□□□□□ -0.73
LSAMP-201ENST00000333617 DDX60Q8IY21 1712 aaKnown RBP10.49□□□□□ -0.73
LSAMP-201ENST00000333617 CDHR2Q9BYE9 1310 aa10.49□□□□□ -0.73
LSAMP-201ENST00000333617 DDX11L8A8MPP1 907 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 UBAP1LF5GYI3 381 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 GNPATO15228 680 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 GPTP24298 496 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 NUCB2P80303 420 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 NMIQ13287 307 aaPredicted RBP10.48□□□□□ -0.73
LSAMP-201ENST00000333617 FAM89AQ96GI7 184 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 ACSBG1Q96GR2 724 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 ZNF594Q96JF6 807 aaPredicted RBP10.48□□□□□ -0.73
LSAMP-201ENST00000333617 DBNDD2Q9BQY9 259 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 SNX14Q9Y5W7 946 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 BTAF1O14981 1849 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 RFX7Q2KHR2 1363 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 CCDC171Q6TFL3 1326 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 ERVV-1B6SEH8 477 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 PTH1RQ03431 593 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 LRRC24Q50LG9 513 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 TRAF7Q6Q0C0 670 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 NLRP10Q86W26 655 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 DZIP3Q86Y13 1208 aaKnown RBP10.48□□□□□ -0.73
LSAMP-201ENST00000333617 TMX3Q96JJ7 454 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 FAM227BQ96M60 508 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 HAUS7Q99871 368 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 SNRKQ9NRH2 765 aa10.48□□□□□ -0.73
LSAMP-201ENST00000333617 SBF2Q86WG5 1849 aa10.47□□□□□ -0.73
LSAMP-201ENST00000333617 ZNF609O15014 1411 aa10.47□□□□□ -0.73
LSAMP-201ENST00000333617 ARAP2Q8WZ64 1704 aa10.47□□□□□ -0.73
LSAMP-201ENST00000333617 LCE2BO14633 110 aa10.47□□□□□ -0.73
LSAMP-201ENST00000333617 CSF1RP07333 972 aa10.47□□□□□ -0.73
LSAMP-201ENST00000333617 ATP6V1AP38606 617 aa10.47□□□□□ -0.73
LSAMP-201ENST00000333617 PXYLP1Q8TE99 480 aa10.47□□□□□ -0.73
LSAMP-201ENST00000333617 ZNF516Q92618 1163 aa10.47□□□□□ -0.73
LSAMP-201ENST00000333617 NEUROD6Q96NK8 337 aa10.47□□□□□ -0.73
LSAMP-201ENST00000333617 UPF3BQ9BZI7 483 aaKnown RBP10.47□□□□□ -0.73
LSAMP-201ENST00000333617 JCADQ9P266 1359 aa10.46□□□□□ -0.73
LSAMP-201ENST00000333617 MED23Q9ULK4 1368 aa10.46□□□□□ -0.73
LSAMP-201ENST00000333617 LOC102724428A0A0B4J2F2 783 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 A0A0D9SFI3 127 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 PTMSP20962 102 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 SSFA2P28290 1259 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 KCNJ4P48050 445 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 SIK1P57059 783 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 IFIT5Q13325 482 aaKnown RBP10.46□□□□□ -0.74
LSAMP-201ENST00000333617 CUL4AQ13619 759 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 TAF7LQ5H9L4 462 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 ZGPATQ8N5A5 531 aaKnown RBP10.46□□□□□ -0.74
LSAMP-201ENST00000333617 KCNB2Q92953 911 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 DNAJC2Q99543 621 aaKnown RBP10.46□□□□□ -0.74
LSAMP-201ENST00000333617 PUS3Q9BZE2 481 aaKnown RBP10.46□□□□□ -0.74
LSAMP-201ENST00000333617 CCDC87Q9NVE4 849 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 CEP126Q9P2H0 1117 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 TBC1D2BQ9UPU7 963 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 TAF1LQ8IZX4 1826 aa10.46□□□□□ -0.74
LSAMP-201ENST00000333617 GPR37O15354 613 aa10.45□□□□□ -0.74
LSAMP-201ENST00000333617 ZKSCAN1P17029 563 aaPredicted RBP10.45□□□□□ -0.74
LSAMP-201ENST00000333617 CRKLP46109 303 aaKnown RBP10.45□□□□□ -0.74
LSAMP-201ENST00000333617 EIF5P55010 431 aaKnown RBP10.45□□□□□ -0.74
LSAMP-201ENST00000333617 COPS2P61201 443 aa10.45□□□□□ -0.74
LSAMP-201ENST00000333617 TIMM10P62072 90 aa10.45□□□□□ -0.74
LSAMP-201ENST00000333617 PRPF40BQ6NWY9 871 aaKnown RBP10.45□□□□□ -0.74
LSAMP-201ENST00000333617 INTS5Q6P9B9 1019 aaKnown RBP10.45□□□□□ -0.74
LSAMP-201ENST00000333617 MAP4K1Q92918 833 aa10.45□□□□□ -0.74
LSAMP-201ENST00000333617 SMARCC1Q92922 1105 aaPredicted RBP10.45□□□□□ -0.74
LSAMP-201ENST00000333617 EDC3Q96F86 508 aaKnown RBP10.45□□□□□ -0.74
LSAMP-201ENST00000333617 INTS4Q96HW7 963 aaKnown RBP10.45□□□□□ -0.74
LSAMP-201ENST00000333617 NGLY1Q96IV0 654 aa10.45□□□□□ -0.74
LSAMP-201ENST00000333617 CCDC85AQ96PX6 553 aaPredicted RBP10.45□□□□□ -0.74
LSAMP-201ENST00000333617 PALLDQ8WX93 1383 aa10.45□□□□□ -0.74
LSAMP-201ENST00000333617 CHD4Q14839 1912 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 A0A1B0GUL7 405 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 IRS4O14654 1257 aaPredicted RBP10.44□□□□□ -0.74
LSAMP-201ENST00000333617 TRAK2O60296 914 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 CYP2E1P05181 493 aaPredicted RBP10.44□□□□□ -0.74
LSAMP-201ENST00000333617 CASTP20810 708 aaKnown RBP10.44□□□□□ -0.74
LSAMP-201ENST00000333617 CTSWP56202 376 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 NECTIN1Q15223 517 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 VPS72Q15906 364 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 KMT5BQ4FZB7 885 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 CREB3L3Q68CJ9 461 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 CLEC17AQ6ZS10 378 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 NOL8Q76FK4 1167 aaKnown RBP10.44□□□□□ -0.74
LSAMP-201ENST00000333617 DDX46Q7L014 1031 aaKnown RBP10.44□□□□□ -0.74
LSAMP-201ENST00000333617 METTL3Q86U44 580 aaKnown RBP10.44□□□□□ -0.74
LSAMP-201ENST00000333617 TICAM2Q86XR7 235 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 C8orf37Q96NL8 207 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 TM6SF1Q9BZW5 370 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 TRMT112Q9UI30 125 aaKnown RBP10.44□□□□□ -0.74
LSAMP-201ENST00000333617 AKAP2Q9Y2D5 859 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 PCDHB3Q9Y5E6 796 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 RBM8AQ9Y5S9 174 aaKnown RBP10.44□□□□□ -0.74
LSAMP-201ENST00000333617 NDUFB9Q9Y6M9 179 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 BCL9LQ86UU0 1499 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 NHSQ6T4R5 1651 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 A0A1B0GUL6 1792 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 TAF1P21675 1872 aa10.44□□□□□ -0.74
LSAMP-201ENST00000333617 GOLGA6L22H0YM25 854 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms