RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 A0A1B0GUL6 1792 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 ANKRD18BA2A2Z9 1011 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 ARID4AP29374 1257 aaPredicted RBP12.61□□□□□ -0.39
CCDC172-201ENST00000333254 ADORA1P30542 326 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 UBE3CQ15386 1083 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 NCOA7Q8NI08 942 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 TFIP11Q9UBB9 837 aaKnown RBP12.61□□□□□ -0.39
CCDC172-201ENST00000333254 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
CCDC172-201ENST00000333254 RTL9Q8NET4 1388 aa12.6□□□□□ -0.39
CCDC172-201ENST00000333254 ZNF335Q9H4Z2 1342 aaPredicted RBP12.6□□□□□ -0.39
CCDC172-201ENST00000333254 PDE8AO60658 829 aa12.6□□□□□ -0.39
CCDC172-201ENST00000333254 UQCRFS1P1P0C7P4 283 aa12.6□□□□□ -0.39
CCDC172-201ENST00000333254 ADD2P35612 726 aa12.6□□□□□ -0.39
CCDC172-201ENST00000333254 BICD2Q8TD16 824 aa12.6□□□□□ -0.39
CCDC172-201ENST00000333254 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
CCDC172-201ENST00000333254 A0A1W2PQ27 194 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 A0A1W2PQ64 194 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 A0A1W2PQD8 194 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 NR1I2O75469 434 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 FGAP02671 866 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 CDC25BP30305 580 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 ZAP70P43403 619 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 FKBP4Q02790 459 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC172-201ENST00000333254 ALX1Q15699 326 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 BRAPQ7Z569 592 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 DDX11Q96FC9 970 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 FAM89AQ96GI7 184 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 PRIMPOLQ96LW4 560 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 CDCA7Q9BWT1 371 aaPredicted RBP12.59□□□□□ -0.39
CCDC172-201ENST00000333254 LRRC2Q9BYS8 371 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 RTEL1Q9NZ71 1219 aa12.59□□□□□ -0.39
CCDC172-201ENST00000333254 ROBO1Q9Y6N7 1651 aa12.58□□□□□ -0.39
CCDC172-201ENST00000333254 MROH5Q6ZUA9 1318 aa12.58□□□□□ -0.39
CCDC172-201ENST00000333254 DYNC1I1O14576 645 aa12.58□□□□□ -0.4
CCDC172-201ENST00000333254 GPAA1O43292 621 aa12.58□□□□□ -0.4
CCDC172-201ENST00000333254 AP5Z1O43299 807 aa12.58□□□□□ -0.4
CCDC172-201ENST00000333254 YEATS4O95619 227 aa12.58□□□□□ -0.4
CCDC172-201ENST00000333254 ITGA6P23229 1130 aa12.58□□□□□ -0.4
CCDC172-201ENST00000333254 ANO6Q4KMQ2 910 aa12.58□□□□□ -0.4
CCDC172-201ENST00000333254 METTL24Q5JXM2 366 aa12.58□□□□□ -0.4
CCDC172-201ENST00000333254 SARM1Q6SZW1 724 aa12.58□□□□□ -0.4
CCDC172-201ENST00000333254 ZNF34Q8IZ26 560 aa12.58□□□□□ -0.4
CCDC172-201ENST00000333254 CBX8Q9HC52 389 aa12.58□□□□□ -0.4
CCDC172-201ENST00000333254 CASZ1Q86V15 1759 aa12.58□□□□□ -0.4
CCDC172-201ENST00000333254 PRC1O43663 620 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 PDE8BO95263 885 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 FDPSP14324 419 aaKnown RBP12.57□□□□□ -0.4
CCDC172-201ENST00000333254 MCAMP43121 646 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 FAM160A1Q05DH4 1040 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 SCARF1Q14162 830 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 NOLC1Q14978 699 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCDC172-201ENST00000333254 WASHC4Q2M389 1173 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 LDHAL6AQ6ZMR3 332 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 CCDC73Q6ZRK6 1079 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 RALYLQ86SE5 291 aaKnown RBP12.57□□□□□ -0.4
CCDC172-201ENST00000333254 PLA2G4DQ86XP0 818 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 ENGASEQ8NFI3 743 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 USP28Q96RU2 1077 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 MAP7D2Q96T17 732 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 POLR3EQ9NVU0 708 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 R3HCC1Q9Y3T6 440 aaKnown RBP12.57□□□□□ -0.4
CCDC172-201ENST00000333254 NID2Q14112 1375 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 SLIT2O94813 1529 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 IRS4O14654 1257 aaPredicted RBP12.57□□□□□ -0.4
CCDC172-201ENST00000333254 ZNF213O14771 459 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 DTNBO60941 627 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 FGFR2P21802 821 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 ANTXR2P58335 489 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 HLFQ16534 295 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 STX1AQ16623 288 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 SLFNL1Q499Z3 407 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 TTLL5Q6EMB2 1281 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 KIAA1524Q8TCG1 905 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 SLC4A9Q96Q91 983 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 PUS7LQ9H0K6 701 aaKnown RBP12.57□□□□□ -0.4
CCDC172-201ENST00000333254 GREM2Q9H772 168 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 BTG4Q9NY30 223 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 HPS5Q9UPZ3 1129 aa12.57□□□□□ -0.4
CCDC172-201ENST00000333254 A0A0G2JLW4 131 aa12.56□□□□□ -0.4
CCDC172-201ENST00000333254 ZNF165P49910 485 aa12.56□□□□□ -0.4
CCDC172-201ENST00000333254 CCT2P78371 535 aaKnown RBP12.56□□□□□ -0.4
CCDC172-201ENST00000333254 SNW1Q13573 536 aaKnown RBP12.56□□□□□ -0.4
CCDC172-201ENST00000333254 PUM3Q15397 648 aaKnown RBP12.56□□□□□ -0.4
CCDC172-201ENST00000333254 CAMK4Q16566 473 aa12.56□□□□□ -0.4
CCDC172-201ENST00000333254 ADALQ6DHV7 355 aa12.56□□□□□ -0.4
CCDC172-201ENST00000333254 MTERF4Q7Z6M4 381 aaKnown RBP12.56□□□□□ -0.4
CCDC172-201ENST00000333254 ILDR1Q86SU0 546 aaPredicted RBP12.56□□□□□ -0.4
CCDC172-201ENST00000333254 CCAR1Q8IX12 1150 aaKnown RBP12.56□□□□□ -0.4
CCDC172-201ENST00000333254 FBXO18Q8NFZ0 1043 aa12.56□□□□□ -0.4
CCDC172-201ENST00000333254 KCNG4Q8TDN1 519 aa12.56□□□□□ -0.4
CCDC172-201ENST00000333254 LPIN2Q92539 896 aa12.56□□□□□ -0.4
CCDC172-201ENST00000333254 TMEM87BQ96K49 555 aa12.56□□□□□ -0.4
CCDC172-201ENST00000333254 MTA3Q9BTC8 594 aa12.56□□□□□ -0.4
CCDC172-201ENST00000333254 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
CCDC172-201ENST00000333254 GTF2F1P35269 517 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCDC172-201ENST00000333254 ZNF75DP51815 510 aa12.55□□□□□ -0.4
CCDC172-201ENST00000333254 CKAP2LQ8IYA6 745 aa12.55□□□□□ -0.4
CCDC172-201ENST00000333254 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
CCDC172-201ENST00000333254 NCOA5Q9HCD5 579 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms