RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 ZNF213O14771 459 aa21.41■■□□□ 1.02
LYSMD4-201ENST00000332728 MAGEB6Q8N7X4 407 aa21.41■■□□□ 1.02
LYSMD4-201ENST00000332728 SPC24Q8NBT2 197 aa21.41■■□□□ 1.02
LYSMD4-201ENST00000332728 CTDSPL2Q05D32 466 aa21.4■■□□□ 1.02
LYSMD4-201ENST00000332728 CCDC82Q8N4S0 544 aa21.4■■□□□ 1.02
LYSMD4-201ENST00000332728 APPBP2Q92624 585 aa21.4■■□□□ 1.02
LYSMD4-201ENST00000332728 ZKSCAN3Q9BRR0 538 aa21.4■■□□□ 1.02
LYSMD4-201ENST00000332728 ARMT1Q9H993 441 aa21.4■■□□□ 1.02
LYSMD4-201ENST00000332728 SPATA31A1Q5TZJ5 1347 aa21.4■■□□□ 1.02
LYSMD4-201ENST00000332728 PHF14O94880 888 aa21.4■■□□□ 1.02
LYSMD4-201ENST00000332728 IL6STP40189 918 aaPredicted RBP21.4■■□□□ 1.02
LYSMD4-201ENST00000332728 CHMP4CQ96CF2 233 aa21.4■■□□□ 1.02
LYSMD4-201ENST00000332728 B4E1Z4 1266 aa21.39■■□□□ 1.02
LYSMD4-201ENST00000332728 EIF5P55010 431 aaKnown RBP21.39■■□□□ 1.02
LYSMD4-201ENST00000332728 RALYLQ86SE5 291 aaKnown RBP21.39■■□□□ 1.02
LYSMD4-201ENST00000332728 TBC1D10CQ8IV04 446 aa21.39■■□□□ 1.02
LYSMD4-201ENST00000332728 ROBO1Q9Y6N7 1651 aa21.39■■□□□ 1.01
LYSMD4-201ENST00000332728 PFKFB2O60825 505 aa21.39■■□□□ 1.01
LYSMD4-201ENST00000332728 RESTQ13127 1097 aa21.39■■□□□ 1.01
LYSMD4-201ENST00000332728 RASGRF1Q13972 1273 aa21.39■■□□□ 1.01
LYSMD4-201ENST00000332728 ZNF34Q8IZ26 560 aa21.39■■□□□ 1.01
LYSMD4-201ENST00000332728 VGLL2Q8N8G2 317 aa21.39■■□□□ 1.01
LYSMD4-201ENST00000332728 ABCF2Q9UG63 623 aa21.39■■□□□ 1.01
LYSMD4-201ENST00000332728 ANTXR2P58335 489 aa21.38■■□□□ 1.01
LYSMD4-201ENST00000332728 SLC4A8Q2Y0W8 1093 aa21.38■■□□□ 1.01
LYSMD4-201ENST00000332728 ZSCAN30Q86W11 494 aa21.38■■□□□ 1.01
LYSMD4-201ENST00000332728 UTP14AQ9BVJ6 771 aaKnown RBP21.38■■□□□ 1.01
LYSMD4-201ENST00000332728 PLA2G12BQ9BX93 195 aa21.38■■□□□ 1.01
LYSMD4-201ENST00000332728 DISP2A7MBM2 1401 aa21.38■■□□□ 1.01
LYSMD4-201ENST00000332728 AP5Z1O43299 807 aa21.38■■□□□ 1.01
LYSMD4-201ENST00000332728 PDE6AP16499 860 aa21.38■■□□□ 1.01
LYSMD4-201ENST00000332728 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.38■■□□□ 1.01
LYSMD4-201ENST00000332728 ADCY5O95622 1261 aa21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 NBPF3Q9H094 633 aa21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 PAPPAQ13219 1627 aa21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 SLIT2O94813 1529 aa21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 GTF2E1P29083 439 aaPredicted RBP21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 AIDAQ96BJ3 306 aa21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 MYO5AQ9Y4I1 1855 aaKnown RBP21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 ADD1P35611 737 aaKnown RBP21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 ADD2P35612 726 aa21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 CYB5R4Q7L1T6 521 aa21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 LUZP1Q86V48 1076 aa21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 MICU3Q86XE3 530 aa21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 USP28Q96RU2 1077 aa21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 NUP62CLQ9H1M0 184 aa21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 TTC12Q9H892 705 aaPredicted RBP21.37■■□□□ 1.01
LYSMD4-201ENST00000332728 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.36■■□□□ 1.01
LYSMD4-201ENST00000332728 MBD4O95243 580 aa21.36■■□□□ 1.01
LYSMD4-201ENST00000332728 CMTR1Q8N1G2 835 aaKnown RBP21.36■■□□□ 1.01
LYSMD4-201ENST00000332728 PHKBQ93100 1093 aa21.36■■□□□ 1.01
LYSMD4-201ENST00000332728 NGLY1Q96IV0 654 aa21.36■■□□□ 1.01
LYSMD4-201ENST00000332728 SRP68Q9UHB9 627 aaKnown RBP21.36■■□□□ 1.01
LYSMD4-201ENST00000332728 CAMTA2O94983 1202 aa21.36■■□□□ 1.01
LYSMD4-201ENST00000332728 FDPSP14324 419 aaKnown RBP21.36■■□□□ 1.01
LYSMD4-201ENST00000332728 GYG1P46976 350 aa21.36■■□□□ 1.01
LYSMD4-201ENST00000332728 TNMDQ9H2S6 317 aa21.36■■□□□ 1.01
LYSMD4-201ENST00000332728 CDHR2Q9BYE9 1310 aa21.35■■□□□ 1.01
LYSMD4-201ENST00000332728 NHSL1Q5SYE7 1610 aa21.35■■□□□ 1.01
LYSMD4-201ENST00000332728 ERFEQ4G0M1 354 aa21.35■■□□□ 1.01
LYSMD4-201ENST00000332728 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.35■■□□□ 1.01
LYSMD4-201ENST00000332728 PUM3Q15397 648 aaKnown RBP21.35■■□□□ 1.01
LYSMD4-201ENST00000332728 SPATA5Q8NB90 893 aa21.35■■□□□ 1.01
LYSMD4-201ENST00000332728 PDLIM2Q96JY6 352 aa21.35■■□□□ 1.01
LYSMD4-201ENST00000332728 CPLX1O14810 134 aa21.34■■□□□ 1.01
LYSMD4-201ENST00000332728 HMGB1P09429 215 aaKnown RBP21.34■■□□□ 1.01
LYSMD4-201ENST00000332728 CSPP1Q1MSJ5 1256 aa21.34■■□□□ 1.01
LYSMD4-201ENST00000332728 ALDH8A1Q9H2A2 487 aaPredicted RBP21.33■■□□□ 1.01
LYSMD4-201ENST00000332728 LAMA4Q16363 1823 aa21.33■■□□□ 1.01
LYSMD4-201ENST00000332728 MCM5P33992 734 aa21.33■■□□□ 1.01
LYSMD4-201ENST00000332728 LINC00116Q8NCU8 138 aa21.33■■□□□ 1.01
LYSMD4-201ENST00000332728 NEDD4P46934 1319 aa21.33■■□□□ 1
LYSMD4-201ENST00000332728 ME1P48163 572 aa21.33■■□□□ 1
LYSMD4-201ENST00000332728 NFXL1Q6ZNB6 911 aa21.33■■□□□ 1
LYSMD4-201ENST00000332728 NCOA7Q8NI08 942 aa21.33■■□□□ 1
LYSMD4-201ENST00000332728 ORC3Q9UBD5 711 aaPredicted RBP21.33■■□□□ 1
LYSMD4-201ENST00000332728 CTNNA3Q9UI47 895 aa21.33■■□□□ 1
LYSMD4-201ENST00000332728 RFX7Q2KHR2 1363 aa21.32■■□□□ 1
LYSMD4-201ENST00000332728 CHRNDQ07001 517 aa21.32■■□□□ 1
LYSMD4-201ENST00000332728 MB21D2Q8IYB1 491 aaPredicted RBP21.32■■□□□ 1
LYSMD4-201ENST00000332728 SMARCC2Q8TAQ2 1214 aa21.32■■□□□ 1
LYSMD4-201ENST00000332728 LPIN2Q92539 896 aa21.32■■□□□ 1
LYSMD4-201ENST00000332728 LRP2BPQ9P2M1 347 aa21.32■■□□□ 1
LYSMD4-201ENST00000332728 TACC3Q9Y6A5 838 aa21.32■■□□□ 1
LYSMD4-201ENST00000332728 SLC5A1P13866 664 aa21.32■■□□□ 1
LYSMD4-201ENST00000332728 MAP3K11Q16584 847 aa21.32■■□□□ 1
LYSMD4-201ENST00000332728 ANO6Q4KMQ2 910 aa21.32■■□□□ 1
LYSMD4-201ENST00000332728 ILDR1Q86SU0 546 aaPredicted RBP21.32■■□□□ 1
LYSMD4-201ENST00000332728 SDR42E1Q8WUS8 393 aa21.32■■□□□ 1
LYSMD4-201ENST00000332728 SCAND2PQ9GZW5 306 aaPredicted RBP21.32■■□□□ 1
LYSMD4-201ENST00000332728 PLEKHG2Q9H7P9 1386 aa21.31■■□□□ 1
LYSMD4-201ENST00000332728 ERVV-1B6SEH8 477 aa21.31■■□□□ 1
LYSMD4-201ENST00000332728 ZFYP08048 801 aaPredicted RBP21.31■■□□□ 1
LYSMD4-201ENST00000332728 IGHMBP2P38935 993 aaKnown RBP21.31■■□□□ 1
LYSMD4-201ENST00000332728 TRDNQ13061 729 aa21.31■■□□□ 1
LYSMD4-201ENST00000332728 GOLPH3LQ9H4A5 285 aa21.31■■□□□ 1
LYSMD4-201ENST00000332728 HPS5Q9UPZ3 1129 aa21.31■■□□□ 1
LYSMD4-201ENST00000332728 NUP98P52948 1817 aa21.31■■□□□ 1
LYSMD4-201ENST00000332728 TYRO3Q06418 890 aa21.31■■□□□ 1
LYSMD4-201ENST00000332728 AMIGO3Q86WK7 504 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms