RNA–Protein interactions for RNA: ENST00000331320.11

MTA1-201, Transcript of metastasis associated 1, humanhuman

TSL 1 (best) BASIC

Gene MTA1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-201ENST00000331320 BATF3Q9NR55 127 aa20.47■□□□□ 0.87
MTA1-201ENST00000331320 MYO3AQ8NEV4 1616 aa20.47■□□□□ 0.87
MTA1-201ENST00000331320 FRMD3A2A2Y4 597 aa20.47■□□□□ 0.87
MTA1-201ENST00000331320 EIF3HO15372 352 aaKnown RBP eCLIP20.47■□□□□ 0.87
MTA1-201ENST00000331320 RASSF9O75901 435 aa20.47■□□□□ 0.87
MTA1-201ENST00000331320 HMGB1P09429 215 aaKnown RBP20.46■□□□□ 0.87
MTA1-201ENST00000331320 RASEFQ8IZ41 740 aa20.46■□□□□ 0.87
MTA1-201ENST00000331320 RPUSD2Q8IZ73 545 aaKnown RBP20.46■□□□□ 0.87
MTA1-201ENST00000331320 IL25Q9H293 177 aa20.46■□□□□ 0.87
MTA1-201ENST00000331320 PUF60Q9UHX1 559 aaKnown RBP20.46■□□□□ 0.87
MTA1-201ENST00000331320 CDC23Q9UJX2 597 aa20.46■□□□□ 0.87
MTA1-201ENST00000331320 MYO6Q9UM54 1294 aa20.46■□□□□ 0.87
MTA1-201ENST00000331320 CDR1P51861 262 aa20.45■□□□□ 0.86
MTA1-201ENST00000331320 TBC1D25Q3MII6 688 aa20.45■□□□□ 0.86
MTA1-201ENST00000331320 YTHDF3Q7Z739 585 aaKnown RBP20.45■□□□□ 0.86
MTA1-201ENST00000331320 COL3A1P02461 1466 aaPredicted RBP20.45■□□□□ 0.86
MTA1-201ENST00000331320 CDK12Q9NYV4 1490 aaPredicted RBP20.45■□□□□ 0.86
MTA1-201ENST00000331320 DTNBO60941 627 aa20.45■□□□□ 0.86
MTA1-201ENST00000331320 CCT2P78371 535 aaKnown RBP20.45■□□□□ 0.86
MTA1-201ENST00000331320 ACTN3Q08043 901 aaPredicted RBP20.45■□□□□ 0.86
MTA1-201ENST00000331320 SNCBQ16143 134 aa20.45■□□□□ 0.86
MTA1-201ENST00000331320 TWISTNBQ3B726 338 aaPredicted RBP20.45■□□□□ 0.86
MTA1-201ENST00000331320 CAPS2Q9BXY5 557 aa20.45■□□□□ 0.86
MTA1-201ENST00000331320 ME3Q16798 604 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 CCDC40Q4G0X9 1142 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 CEP57Q86XR8 500 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 TCP11Q8WWU5 503 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 GLI2P10070 1586 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 SKAP2O75563 359 aaPredicted RBP20.44■□□□□ 0.86
MTA1-201ENST00000331320 C1QTNF12Q5T7M4 302 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 MICALCLQ6ZW33 695 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 SLC12A5Q9H2X9 1139 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 VCPKMTQ9H867 229 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 PES1O00541 588 aaKnown RBP20.44■□□□□ 0.86
MTA1-201ENST00000331320 RAB27AP51159 221 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 WDR93Q6P2C0 686 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 TRIM74Q86UV6 250 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 TRIM73Q86UV7 250 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 ZBTB10Q96DT7 871 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 SPDL1Q96EA4 605 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 STAP2Q9UGK3 403 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 CFAP45Q9UL16 551 aa20.44■□□□□ 0.86
MTA1-201ENST00000331320 EFCAB6Q5THR3 1501 aa20.43■□□□□ 0.86
MTA1-201ENST00000331320 A0A087WWV3 80 aa20.43■□□□□ 0.86
MTA1-201ENST00000331320 CARMIL2Q6F5E8 1435 aa20.43■□□□□ 0.86
MTA1-201ENST00000331320 CCDC73Q6ZRK6 1079 aa20.43■□□□□ 0.86
MTA1-201ENST00000331320 CCAR1Q8IX12 1150 aaKnown RBP20.43■□□□□ 0.86
MTA1-201ENST00000331320 GBP2P32456 591 aaPredicted RBP20.43■□□□□ 0.86
MTA1-201ENST00000331320 LSG1Q9H089 658 aaKnown RBP20.43■□□□□ 0.86
MTA1-201ENST00000331320 RHOXF2BP0C7M4 288 aa20.42■□□□□ 0.86
MTA1-201ENST00000331320 RHOXF2Q9BQY4 288 aa20.42■□□□□ 0.86
MTA1-201ENST00000331320 HPCAL4Q9UM19 191 aa20.42■□□□□ 0.86
MTA1-201ENST00000331320 GRIN2DO15399 1336 aa20.42■□□□□ 0.86
MTA1-201ENST00000331320 CDC42BPBQ9Y5S2 1711 aa20.42■□□□□ 0.86
MTA1-201ENST00000331320 ELL2O00472 640 aaPredicted RBP20.42■□□□□ 0.86
MTA1-201ENST00000331320 CPA1P15085 419 aa20.42■□□□□ 0.86
MTA1-201ENST00000331320 HNRNPMP52272 730 aaKnown RBP eCLIP20.42■□□□□ 0.866e-7■■■■□ 24.5
MTA1-201ENST00000331320 TMEM139Q8IV31 216 aa20.42■□□□□ 0.86
MTA1-201ENST00000331320 RSRC1Q96IZ7 334 aaKnown RBP20.42■□□□□ 0.86
MTA1-201ENST00000331320 SETD1AO15047 1707 aaKnown RBP20.41■□□□□ 0.86
MTA1-201ENST00000331320 A6NNZ2 444 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 CBFA2T2O43439 604 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 FBLN2P98095 1184 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 FANCCQ00597 558 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 TUBB8Q3ZCM7 444 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 FILIP1LQ4L180 1135 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 NECAB1Q8N987 351 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 STK31Q9BXU1 1019 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 TM6SF1Q9BZW5 370 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.41■□□□□ 0.86
MTA1-201ENST00000331320 SAMM50Q9Y512 469 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 UNC5CLQ8IV45 518 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 CENPHQ9H3R5 247 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 CYP46A1Q9Y6A2 500 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 AOX1Q06278 1338 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 MAST1Q9Y2H9 1570 aa20.41■□□□□ 0.86
MTA1-201ENST00000331320 GOLGA6CA6NDK9 693 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 PPFIA2O75334 1257 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 GOLGA6DP0CG33 693 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 IBSPP21815 317 aaPredicted RBP20.4■□□□□ 0.86
MTA1-201ENST00000331320 SLC8A1P32418 973 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 PEX19P40855 299 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 SF3B2Q13435 895 aaKnown RBP20.4■□□□□ 0.86
MTA1-201ENST00000331320 LRRCC1Q9C099 1032 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 GOLGA6AQ9NYA3 693 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 CHD2O14647 1828 aaKnown RBP20.4■□□□□ 0.86
MTA1-201ENST00000331320 LMBR1Q8WVP7 490 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 GNGT1P63211 74 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 SNX1Q13596 522 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 SPDYE1Q8NFV5 336 aaPredicted RBP20.4■□□□□ 0.86
MTA1-201ENST00000331320 CRACR2AQ9BSW2 395 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 PAGR1Q9BTK6 254 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 SUDS3Q9H7L9 328 aaPredicted RBP20.4■□□□□ 0.86
MTA1-201ENST00000331320 ZSWIM6Q9HCJ5 1215 aa20.4■□□□□ 0.86
MTA1-201ENST00000331320 CHCHD3Q9NX63 227 aaKnown RBP20.4■□□□□ 0.86
MTA1-201ENST00000331320 TTLL7Q6ZT98 887 aa20.39■□□□□ 0.85
MTA1-201ENST00000331320 PARP9Q8IXQ6 854 aa20.39■□□□□ 0.85
MTA1-201ENST00000331320 OR8K1Q8NGG5 319 aa20.39■□□□□ 0.85
MTA1-201ENST00000331320 SLC40A1Q9NP59 571 aa20.39■□□□□ 0.85
MTA1-201ENST00000331320 FAM160A1Q05DH4 1040 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms