RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 KRT32Q14532 448 aa21.04■□□□□ 0.96
CLSTN3-202ENST00000331148 TXLNBQ8N3L3 684 aa21.04■□□□□ 0.96
CLSTN3-202ENST00000331148 FSIP1Q8NA03 581 aa21.04■□□□□ 0.96
CLSTN3-202ENST00000331148 PHLPP2Q6ZVD8 1323 aa21.04■□□□□ 0.96
CLSTN3-202ENST00000331148 PLCH1Q4KWH8 1693 aa21.04■□□□□ 0.96
CLSTN3-202ENST00000331148 NAA16Q6N069 864 aaPredicted RBP21.04■□□□□ 0.96
CLSTN3-202ENST00000331148 SMARCC2Q8TAQ2 1214 aa21.04■□□□□ 0.96
CLSTN3-202ENST00000331148 USP28Q96RU2 1077 aa21.04■□□□□ 0.96
CLSTN3-202ENST00000331148 DDX21Q9NR30 783 aaKnown RBP eCLIP21.04■□□□□ 0.96
CLSTN3-202ENST00000331148 ETF1P62495 437 aaKnown RBP21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 MUM1L1Q5H9M0 696 aa21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 Q6ZUG5 572 aa21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 EAF2Q96CJ1 260 aaPredicted RBP21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 IFNKQ9P0W0 207 aa21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 SCRN1Q12765 414 aa21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 PROSER3Q2NL68 480 aa21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 HOMER1Q86YM7 354 aa21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 NEK1Q96PY6 1258 aa21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 UBXN6Q9BZV1 441 aa21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 TLR7Q9NYK1 1049 aaKnown RBP21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 DISP2A7MBM2 1401 aa21.03■□□□□ 0.96
CLSTN3-202ENST00000331148 NRDCO43847 1150 aa21.02■□□□□ 0.96
CLSTN3-202ENST00000331148 TADA3O75528 432 aa21.02■□□□□ 0.96
CLSTN3-202ENST00000331148 TAF5LO75529 589 aa21.02■□□□□ 0.96
CLSTN3-202ENST00000331148 FOSBP53539 338 aa21.02■□□□□ 0.96
CLSTN3-202ENST00000331148 DHX8Q14562 1220 aaKnown RBP21.02■□□□□ 0.96
CLSTN3-202ENST00000331148 USPL1Q5W0Q7 1092 aa21.02■□□□□ 0.96
CLSTN3-202ENST00000331148 CCDC8Q9H0W5 538 aaPredicted RBP21.02■□□□□ 0.96
CLSTN3-202ENST00000331148 BOLA2Q9H3K6 86 aa21.02■□□□□ 0.96
CLSTN3-202ENST00000331148 DNAI1Q9UI46 699 aa21.02■□□□□ 0.96
CLSTN3-202ENST00000331148 C5P01031 1676 aa21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 MYH15Q9Y2K3 1946 aa21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 SASH1O94885 1247 aa21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 SEC31AO94979 1220 aaKnown RBP21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 ME1P48163 572 aa21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 PDIA6Q15084 440 aa21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 PLCD3Q8N3E9 789 aa21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 MNS1Q8NEH6 495 aa21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 ZNF396Q96N95 335 aaPredicted RBP21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 BPIFA3Q9BQP9 254 aa21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 ATP8B1O43520 1251 aa21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 DPCR1Q3MIW9 517 aa21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 ATL3Q6DD88 541 aa21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 FMR1NBQ8N0W7 255 aaPredicted RBP21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 LLPHQ9BRT6 129 aaKnown RBP21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 SRRTQ9BXP5 876 aaKnown RBP21.01■□□□□ 0.95
CLSTN3-202ENST00000331148 CCP110O43303 1012 aa21■□□□□ 0.95
CLSTN3-202ENST00000331148 NSUN7Q8NE18 718 aaKnown RBP21■□□□□ 0.95
CLSTN3-202ENST00000331148 C9orf78Q9NZ63 289 aaPredicted RBP21■□□□□ 0.95
CLSTN3-202ENST00000331148 EXOC5O00471 708 aa20.99■□□□□ 0.95
CLSTN3-202ENST00000331148 ALDH1L1O75891 902 aa20.99■□□□□ 0.95
CLSTN3-202ENST00000331148 ST5P78524 1137 aa20.99■□□□□ 0.95
CLSTN3-202ENST00000331148 MRPS27Q92552 414 aaKnown RBP20.99■□□□□ 0.95
CLSTN3-202ENST00000331148 SMARCE1Q969G3 411 aa20.99■□□□□ 0.95
CLSTN3-202ENST00000331148 CCDC158Q5M9N0 1113 aa20.99■□□□□ 0.95
CLSTN3-202ENST00000331148 KSR2Q6VAB6 950 aa20.99■□□□□ 0.95
CLSTN3-202ENST00000331148 COL15A1P39059 1388 aa20.98■□□□□ 0.95
CLSTN3-202ENST00000331148 EFCAB8A8MWE9 144 aa20.98■□□□□ 0.95
CLSTN3-202ENST00000331148 PFKFB2O60825 505 aa20.98■□□□□ 0.95
CLSTN3-202ENST00000331148 TRIM65Q6PJ69 517 aa20.98■□□□□ 0.95
CLSTN3-202ENST00000331148 KRBA2Q6ZNG9 492 aa20.98■□□□□ 0.95
CLSTN3-202ENST00000331148 SDF4Q9BRK5 362 aa20.98■□□□□ 0.95
CLSTN3-202ENST00000331148 THRAP3Q9Y2W1 955 aaKnown RBP20.98■□□□□ 0.95
CLSTN3-202ENST00000331148 FANCGO15287 622 aa20.98■□□□□ 0.95
CLSTN3-202ENST00000331148 SASH3O75995 380 aa20.98■□□□□ 0.95
CLSTN3-202ENST00000331148 TPM1P09493 284 aa20.98■□□□□ 0.95
CLSTN3-202ENST00000331148 OAS2P29728 719 aaKnown RBP20.98■□□□□ 0.95
CLSTN3-202ENST00000331148 CDCA7Q9BWT1 371 aaPredicted RBP20.98■□□□□ 0.95
CLSTN3-202ENST00000331148 SPATA31A1Q5TZJ5 1347 aa20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 PTPDC1A2A3K4 754 aa20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 TBC1D8O95759 1140 aa20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 DDX58O95786 925 aaKnown RBP20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 LRRFIP1Q32MZ4 808 aaKnown RBP20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 CARD6Q9BX69 1037 aa20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 TMOD3Q9NYL9 352 aa20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 KIAA1468Q9P260 1216 aa20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 MAP3K2Q9Y2U5 619 aa20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 NRAPQ86VF7 1730 aa20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 WNK3Q9BYP7 1800 aa20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 URI1O94763 535 aaPredicted RBP20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 CTDNEP1O95476 244 aa20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 G3BP1Q13283 466 aaKnown RBP eCLIP20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 ZRSR1Q15695 479 aaKnown RBP20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 LRRC2Q9BYS8 371 aa20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 PCDHA7Q9UN72 937 aa20.97■□□□□ 0.95
CLSTN3-202ENST00000331148 MYL6BP14649 208 aa20.96■□□□□ 0.95
CLSTN3-202ENST00000331148 ILDR1Q86SU0 546 aaPredicted RBP20.96■□□□□ 0.95
CLSTN3-202ENST00000331148 PARP3Q9Y6F1 533 aa20.96■□□□□ 0.95
CLSTN3-202ENST00000331148 EVCP57679 992 aa20.95■□□□□ 0.95
CLSTN3-202ENST00000331148 AIMP1Q12904 312 aaKnown RBP20.95■□□□□ 0.95
CLSTN3-202ENST00000331148 GPS2Q13227 327 aa20.95■□□□□ 0.95
CLSTN3-202ENST00000331148 CC2D1AQ6P1N0 951 aaPredicted RBP20.95■□□□□ 0.95
CLSTN3-202ENST00000331148 NEDD4P46934 1319 aa20.95■□□□□ 0.94
CLSTN3-202ENST00000331148 HDAC5Q9UQL6 1122 aa20.95■□□□□ 0.94
CLSTN3-202ENST00000331148 TOGARAM1Q9Y4F4 1720 aa20.95■□□□□ 0.94
CLSTN3-202ENST00000331148 SLIT2O94813 1529 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 NWD2Q9ULI1 1742 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 A0A1B0GVL5 298 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 NDUFA8P51970 172 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms