RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 NEDD4P46934 1319 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 HSPA2P54652 639 aa16.76■□□□□ 0.27
SNX20-202ENST00000330943 PTPN12Q05209 780 aaKnown RBP16.76■□□□□ 0.27
SNX20-202ENST00000330943 E7EWF7 191 aa16.75■□□□□ 0.27
SNX20-202ENST00000330943 AMOTQ4VCS5 1084 aa16.75■□□□□ 0.27
SNX20-202ENST00000330943 KBTBD3Q8NAB2 608 aa16.75■□□□□ 0.27
SNX20-202ENST00000330943 AGXT2Q9BYV1 514 aa16.75■□□□□ 0.27
SNX20-202ENST00000330943 ORC3Q9UBD5 711 aaPredicted RBP16.75■□□□□ 0.27
SNX20-202ENST00000330943 USP54Q70EL1 1684 aa16.75■□□□□ 0.27
SNX20-202ENST00000330943 POLR3GO15318 223 aaPredicted RBP16.75■□□□□ 0.27
SNX20-202ENST00000330943 URI1O94763 535 aaPredicted RBP16.75■□□□□ 0.27
SNX20-202ENST00000330943 FDPSP14324 419 aaKnown RBP16.75■□□□□ 0.27
SNX20-202ENST00000330943 NLRP12P59046 1061 aa16.75■□□□□ 0.27
SNX20-202ENST00000330943 NCAPHQ15003 741 aa16.75■□□□□ 0.27
SNX20-202ENST00000330943 PHLPP2Q6ZVD8 1323 aa16.74■□□□□ 0.27
SNX20-202ENST00000330943 SH3TC1Q8TE82 1336 aa16.74■□□□□ 0.27
SNX20-202ENST00000330943 ATP1A3P13637 1013 aa16.74■□□□□ 0.27
SNX20-202ENST00000330943 FANCCQ00597 558 aa16.74■□□□□ 0.27
SNX20-202ENST00000330943 XAGE3Q8WTP9 111 aa16.74■□□□□ 0.27
SNX20-202ENST00000330943 GOLIM4O00461 696 aa16.74■□□□□ 0.27
SNX20-202ENST00000330943 SPTLC2O15270 562 aa16.74■□□□□ 0.27
SNX20-202ENST00000330943 TUBB4AP04350 444 aa16.74■□□□□ 0.27
SNX20-202ENST00000330943 RFX5P48382 616 aaPredicted RBP16.74■□□□□ 0.27
SNX20-202ENST00000330943 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
SNX20-202ENST00000330943 KCNG4Q8TDN1 519 aa16.74■□□□□ 0.27
SNX20-202ENST00000330943 TRERF1Q96PN7 1200 aa16.74■□□□□ 0.27
SNX20-202ENST00000330943 AXIN2Q9Y2T1 843 aa16.74■□□□□ 0.27
SNX20-202ENST00000330943 SEC31AO94979 1220 aaKnown RBP16.73■□□□□ 0.27
SNX20-202ENST00000330943 ZNF202O95125 648 aa16.73■□□□□ 0.27
SNX20-202ENST00000330943 ZRANB2O95218 330 aaKnown RBP eCLIP16.73■□□□□ 0.27
SNX20-202ENST00000330943 DHX8Q14562 1220 aaKnown RBP16.73■□□□□ 0.27
SNX20-202ENST00000330943 VGLL3A8MV65 326 aa16.73■□□□□ 0.27
SNX20-202ENST00000330943 HNRNPH2P55795 449 aaKnown RBP16.73■□□□□ 0.27
SNX20-202ENST00000330943 ZNF274Q96GC6 653 aaPredicted RBP16.73■□□□□ 0.27
SNX20-202ENST00000330943 CARD6Q9BX69 1037 aa16.73■□□□□ 0.27
SNX20-202ENST00000330943 CCP110O43303 1012 aa16.73■□□□□ 0.27
SNX20-202ENST00000330943 PIP4K2AP48426 406 aaPredicted RBP16.73■□□□□ 0.27
SNX20-202ENST00000330943 COPS6Q7L5N1 327 aa16.73■□□□□ 0.27
SNX20-202ENST00000330943 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
SNX20-202ENST00000330943 C8orf76Q96K31 380 aa16.73■□□□□ 0.27
SNX20-202ENST00000330943 DSCC1Q9BVC3 393 aa16.73■□□□□ 0.27
SNX20-202ENST00000330943 GPHNQ9NQX3 736 aaPredicted RBP16.73■□□□□ 0.27
SNX20-202ENST00000330943 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.73■□□□□ 0.27
SNX20-202ENST00000330943 SLC39A6Q13433 755 aa16.72■□□□□ 0.27
SNX20-202ENST00000330943 FAM177A1Q8N128 213 aaPredicted RBP16.72■□□□□ 0.27
SNX20-202ENST00000330943 FANCGO15287 622 aa16.72■□□□□ 0.27
SNX20-202ENST00000330943 TADA3O75528 432 aa16.72■□□□□ 0.27
SNX20-202ENST00000330943 GOLGA8FQ08AF8 430 aa16.72■□□□□ 0.27
SNX20-202ENST00000330943 GOLGA8DPQ0D2H9 430 aa16.72■□□□□ 0.27
SNX20-202ENST00000330943 TRIM65Q6PJ69 517 aa16.72■□□□□ 0.27
SNX20-202ENST00000330943 METTL22Q9BUU2 404 aaPredicted RBP16.72■□□□□ 0.27
SNX20-202ENST00000330943 UTP14AQ9BVJ6 771 aaKnown RBP16.72■□□□□ 0.27
SNX20-202ENST00000330943 ARHGAP23Q9P227 1491 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 NFAT5O94916 1531 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 YEATS4O95619 227 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 HSPD1P10809 573 aaKnown RBP16.71■□□□□ 0.27
SNX20-202ENST00000330943 PTPN21Q16825 1174 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 TEX35Q5T0J7 233 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 DPF2Q92785 391 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 NEUROD6Q96NK8 337 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 GJB4Q9NTQ9 266 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 POLR3EQ9NVU0 708 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 PAG1Q9NWQ8 432 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 SERPINC1P01008 464 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 PFKFB1P16118 471 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 UBASH3AP57075 661 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 CHRNA2Q15822 529 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 MYSM1Q5VVJ2 828 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 HELLSQ9NRZ9 838 aa16.71■□□□□ 0.27
SNX20-202ENST00000330943 GCP02774 474 aa16.7■□□□□ 0.26
SNX20-202ENST00000330943 CFAP100Q494V2 611 aa16.7■□□□□ 0.26
SNX20-202ENST00000330943 TTLL5Q6EMB2 1281 aa16.7■□□□□ 0.26
SNX20-202ENST00000330943 SYNE3Q6ZMZ3 975 aa16.7■□□□□ 0.26
SNX20-202ENST00000330943 NEK11Q8NG66 645 aa16.7■□□□□ 0.26
SNX20-202ENST00000330943 EPC1Q9H2F5 836 aa16.7■□□□□ 0.26
SNX20-202ENST00000330943 EVCP57679 992 aa16.7■□□□□ 0.26
SNX20-202ENST00000330943 RAB11FIP4Q86YS3 637 aa16.7■□□□□ 0.26
SNX20-202ENST00000330943 SRRTQ9BXP5 876 aaKnown RBP16.7■□□□□ 0.26
SNX20-202ENST00000330943 HSD3B7Q9H2F3 369 aa16.7■□□□□ 0.26
SNX20-202ENST00000330943 IKBKBO14920 756 aa16.69■□□□□ 0.26
SNX20-202ENST00000330943 CAPN2P17655 700 aa16.69■□□□□ 0.26
SNX20-202ENST00000330943 LRRFIP1Q32MZ4 808 aaKnown RBP16.69■□□□□ 0.26
SNX20-202ENST00000330943 PARP3Q9Y6F1 533 aa16.69■□□□□ 0.26
SNX20-202ENST00000330943 MROH7-TTC4A0A0A0MT08 1334 aa16.69■□□□□ 0.26
SNX20-202ENST00000330943 PALLDQ8WX93 1383 aa16.69■□□□□ 0.26
SNX20-202ENST00000330943 EFCAB8A8MWE9 144 aa16.69■□□□□ 0.26
SNX20-202ENST00000330943 REXO1L1PQ8IX06 675 aa16.69■□□□□ 0.26
SNX20-202ENST00000330943 TULP2O00295 520 aa16.69■□□□□ 0.26
SNX20-202ENST00000330943 MARCKSP29966 332 aaPredicted RBP16.69■□□□□ 0.26
SNX20-202ENST00000330943 ZMYM1Q5SVZ6 1142 aa16.69■□□□□ 0.26
SNX20-202ENST00000330943 FBXO18Q8NFZ0 1043 aa16.69■□□□□ 0.26
SNX20-202ENST00000330943 CHMP4CQ96CF2 233 aa16.69■□□□□ 0.26
SNX20-202ENST00000330943 TAOK2Q9UL54 1235 aa16.69■□□□□ 0.26
SNX20-202ENST00000330943 OVOS2A0A0G2JMS6 1433 aa16.68■□□□□ 0.26
SNX20-202ENST00000330943 ATP5J2-PTCD1G3V325 749 aa16.68■□□□□ 0.26
SNX20-202ENST00000330943 PTCD1O75127 700 aaKnown RBP16.68■□□□□ 0.26
SNX20-202ENST00000330943 MAST3O60307 1309 aa16.68■□□□□ 0.26
SNX20-202ENST00000330943 KIF28PB7ZC32 967 aa16.68■□□□□ 0.26
SNX20-202ENST00000330943 CCDC158Q5M9N0 1113 aa16.68■□□□□ 0.26
SNX20-202ENST00000330943 AXDND1Q5T1B0 1012 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms