RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 LRP10Q7Z4F1 713 aa8.25□□□□□ -1.09
SMG1-201ENST00000330588 PRR7Q8TB68 274 aa8.25□□□□□ -1.09
SMG1-201ENST00000330588 CNKSR1Q969H4 720 aa8.25□□□□□ -1.09
SMG1-201ENST00000330588 THUMPD2Q9BTF0 503 aaKnown RBP8.25□□□□□ -1.09
SMG1-201ENST00000330588 NYXQ9GZU5 481 aa8.25□□□□□ -1.09
SMG1-201ENST00000330588 SBF1O95248 1867 aa8.25□□□□□ -1.09
SMG1-201ENST00000330588 ANKRD36CQ5JPF3 1778 aa8.25□□□□□ -1.09
SMG1-201ENST00000330588 ZNF853P0CG23 659 aa8.24□□□□□ -1.09
SMG1-201ENST00000330588 MTMR2Q13614 643 aa8.24□□□□□ -1.09
SMG1-201ENST00000330588 TPTE2Q6XPS3 522 aa8.24□□□□□ -1.09
SMG1-201ENST00000330588 KIF6Q6ZMV9 814 aa8.24□□□□□ -1.09
SMG1-201ENST00000330588 C2CD5Q86YS7 1000 aa8.24□□□□□ -1.09
SMG1-201ENST00000330588 MPNDQ8N594 471 aa8.24□□□□□ -1.09
SMG1-201ENST00000330588 NGEFQ8N5V2 710 aa8.24□□□□□ -1.09
SMG1-201ENST00000330588 MIS18AQ9NYP9 233 aa8.24□□□□□ -1.09
SMG1-201ENST00000330588 ZNF330Q9Y3S2 320 aaPredicted RBP8.24□□□□□ -1.09
SMG1-201ENST00000330588 TNRC6CQ9HCJ0 1690 aaKnown RBP8.24□□□□□ -1.09
SMG1-201ENST00000330588 FER1L6Q2WGJ9 1857 aa8.24□□□□□ -1.09
SMG1-201ENST00000330588 SRGNP10124 158 aa8.23□□□□□ -1.09
SMG1-201ENST00000330588 CHRNA5P30532 468 aa8.23□□□□□ -1.09
SMG1-201ENST00000330588 GNAI1P63096 354 aa8.23□□□□□ -1.09
SMG1-201ENST00000330588 PARP10Q53GL7 1025 aa8.23□□□□□ -1.09
SMG1-201ENST00000330588 ARHGAP27Q6ZUM4 889 aa8.23□□□□□ -1.09
SMG1-201ENST00000330588 TRIM46Q7Z4K8 759 aa8.23□□□□□ -1.09
SMG1-201ENST00000330588 NBPF5PQ86XG9 351 aaPredicted RBP8.23□□□□□ -1.09
SMG1-201ENST00000330588 MASTLQ96GX5 879 aa8.23□□□□□ -1.09
SMG1-201ENST00000330588 IFT57Q9NWB7 429 aa8.23□□□□□ -1.09
SMG1-201ENST00000330588 NIP7Q9Y221 180 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMG1-201ENST00000330588 NPR1P16066 1061 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 C1QTNF8P60827 252 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 HSP90AB3PQ58FF7 597 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 BICDL1Q6ZP65 573 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 CCDC146Q8IYE0 955 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 ZNF34Q8IZ26 560 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 BEGAINQ9BUH8 593 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 DDX21Q9NR30 783 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMG1-201ENST00000330588 DICER1Q9UPY3 1922 aaKnown RBP8.22□□□□□ -1.09
SMG1-201ENST00000330588 IL16Q14005 1332 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 ANP32CO43423 234 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 LMNB1P20700 586 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 CRY2Q49AN0 593 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 RSBN1LQ6PCB5 846 aaPredicted RBP8.22□□□□□ -1.09
SMG1-201ENST00000330588 ZNF511Q8NB15 262 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 BAP1Q92560 729 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 DDRGK1Q96HY6 314 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 WASF2Q9Y6W5 498 aa8.22□□□□□ -1.09
SMG1-201ENST00000330588 TIAM2Q8IVF5 1701 aa8.21□□□□□ -1.1
SMG1-201ENST00000330588 APAF1O14727 1248 aa8.21□□□□□ -1.1
SMG1-201ENST00000330588 NPHP1O15259 732 aa8.21□□□□□ -1.1
SMG1-201ENST00000330588 CAPN5O15484 640 aaPredicted RBP8.21□□□□□ -1.1
SMG1-201ENST00000330588 ALDH1B1P30837 517 aa8.21□□□□□ -1.1
SMG1-201ENST00000330588 PIP4K2AP48426 406 aaPredicted RBP8.21□□□□□ -1.1
SMG1-201ENST00000330588 HLFQ16534 295 aa8.21□□□□□ -1.1
SMG1-201ENST00000330588 CC2D2BQ6DHV5 1058 aa8.21□□□□□ -1.1
SMG1-201ENST00000330588 PPP1R42Q7Z4L9 355 aa8.21□□□□□ -1.1
SMG1-201ENST00000330588 TBC1D2Q9BYX2 928 aa8.21□□□□□ -1.1
SMG1-201ENST00000330588 DBF4Q9UBU7 674 aaPredicted RBP8.21□□□□□ -1.1
SMG1-201ENST00000330588 STK17AQ9UEE5 414 aa8.21□□□□□ -1.1
SMG1-201ENST00000330588 RRP7AQ9Y3A4 280 aaKnown RBP8.21□□□□□ -1.1
SMG1-201ENST00000330588 KDM2BQ8NHM5 1336 aa8.2□□□□□ -1.1
SMG1-201ENST00000330588 SLX4Q8IY92 1834 aa8.2□□□□□ -1.1
SMG1-201ENST00000330588 VARSP26640 1264 aaKnown RBP8.2□□□□□ -1.1
SMG1-201ENST00000330588 HOXA10P31260 410 aaPredicted RBP8.2□□□□□ -1.1
SMG1-201ENST00000330588 DIXDC1Q155Q3 683 aa8.2□□□□□ -1.1
SMG1-201ENST00000330588 LINC01559Q495D7 138 aa8.2□□□□□ -1.1
SMG1-201ENST00000330588 SLC10A5Q5PT55 438 aa8.2□□□□□ -1.1
SMG1-201ENST00000330588 C9orf131Q5VYM1 1079 aa8.2□□□□□ -1.1
SMG1-201ENST00000330588 LYPD8Q6UX82 237 aa8.2□□□□□ -1.1
SMG1-201ENST00000330588 TTLL7Q6ZT98 887 aa8.2□□□□□ -1.1
SMG1-201ENST00000330588 C7orf43Q8WVR3 580 aa8.2□□□□□ -1.1
SMG1-201ENST00000330588 MBIPQ9NS73 344 aa8.2□□□□□ -1.1
SMG1-201ENST00000330588 HYPKQ9NX55 129 aa8.2□□□□□ -1.1
SMG1-201ENST00000330588 UBN2Q6ZU65 1347 aa8.19□□□□□ -1.1
SMG1-201ENST00000330588 SPTLC1O15269 473 aa8.19□□□□□ -1.1
SMG1-201ENST00000330588 NTSR2O95665 410 aa8.19□□□□□ -1.1
SMG1-201ENST00000330588 BMP1P13497 986 aa8.19□□□□□ -1.1
SMG1-201ENST00000330588 MYL6BP14649 208 aa8.19□□□□□ -1.1
SMG1-201ENST00000330588 INSM1Q01101 510 aaPredicted RBP8.19□□□□□ -1.1
SMG1-201ENST00000330588 HDGFL1Q5TGJ6 251 aa8.19□□□□□ -1.1
SMG1-201ENST00000330588 DUSP27Q5VZP5 1158 aa8.19□□□□□ -1.1
SMG1-201ENST00000330588 PRPF40BQ6NWY9 871 aaKnown RBP8.19□□□□□ -1.1
SMG1-201ENST00000330588 PLBD2Q8NHP8 589 aa8.19□□□□□ -1.1
SMG1-201ENST00000330588 GTF3C3Q9Y5Q9 886 aa8.19□□□□□ -1.1
SMG1-201ENST00000330588 SNED1Q8TER0 1413 aa8.19□□□□□ -1.1
SMG1-201ENST00000330588 WDR90Q96KV7 1748 aa8.19□□□□□ -1.1
SMG1-201ENST00000330588 LAMB2P55268 1798 aa8.19□□□□□ -1.1
SMG1-201ENST00000330588 NFKBIEO00221 500 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 TRIM28Q13263 835 aaKnown RBP8.18□□□□□ -1.1
SMG1-201ENST00000330588 TCIRG1Q13488 830 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 CCDC93Q567U6 631 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 RTKN2Q8IZC4 609 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 ZNF622Q969S3 477 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMG1-201ENST00000330588 CRAMP1Q96RY5 1269 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 RNF181Q9P0P0 153 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 PCDHB15Q9Y5E8 787 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 TLL2Q9Y6L7 1015 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 ABCC12Q96J65 1359 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 CFAP99D6REC4 459 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 TOMM70O94826 608 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 EIF2S2P20042 333 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms