RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NAP1L2Q9ULW6 460 aaPredicted RBP17.14■□□□□ 0.33
TPM3-206ENST00000330188 PTMAP06454 111 aaKnown RBP17.13■□□□□ 0.33
TPM3-206ENST00000330188 KCNA4P22459 653 aa17.13■□□□□ 0.33
TPM3-206ENST00000330188 ADD1P35611 737 aaKnown RBP17.13■□□□□ 0.33
TPM3-206ENST00000330188 FOSBP53539 338 aa17.13■□□□□ 0.33
TPM3-206ENST00000330188 CFAP45Q9UL16 551 aa17.13■□□□□ 0.33
TPM3-206ENST00000330188 CAMK4Q16566 473 aa17.12■□□□□ 0.33
TPM3-206ENST00000330188 ZSCAN25Q6NSZ9 544 aa17.12■□□□□ 0.33
TPM3-206ENST00000330188 RBM43Q6ZSC3 357 aaKnown RBP17.12■□□□□ 0.33
TPM3-206ENST00000330188 ARID4AP29374 1257 aaPredicted RBP17.12■□□□□ 0.33
TPM3-206ENST00000330188 EIF5P55010 431 aaKnown RBP17.12■□□□□ 0.33
TPM3-206ENST00000330188 TTF1Q15361 905 aaPredicted RBP17.12■□□□□ 0.33
TPM3-206ENST00000330188 CHMP4CQ96CF2 233 aa17.12■□□□□ 0.33
TPM3-206ENST00000330188 TNMDQ9H2S6 317 aa17.12■□□□□ 0.33
TPM3-206ENST00000330188 CLSTN2Q9H4D0 955 aa17.12■□□□□ 0.33
TPM3-206ENST00000330188 PIH1D3Q9NQM4 214 aaKnown RBP17.12■□□□□ 0.33
TPM3-206ENST00000330188 RREB1Q92766 1687 aa17.12■□□□□ 0.33
TPM3-206ENST00000330188 PHLPP1O60346 1717 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 CARMIL3Q8ND23 1372 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 PRC1O43663 620 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 FGFR2P21802 821 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 PHKA1P46020 1223 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 ANTXR2P58335 489 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 CCDC102BQ68D86 513 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 INTS5Q6P9B9 1019 aaKnown RBP17.11■□□□□ 0.33
TPM3-206ENST00000330188 BICD2Q8TD16 824 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 MRVI1Q9Y6F6 885 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 ZNF213O14771 459 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 NR1I2O75469 434 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 FDPSP14324 419 aaKnown RBP17.11■□□□□ 0.33
TPM3-206ENST00000330188 TYRO3Q06418 890 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 SLC9C2Q5TAH2 1124 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
TPM3-206ENST00000330188 NCOA7Q8NI08 942 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 AK7Q96M32 723 aa17.11■□□□□ 0.33
TPM3-206ENST00000330188 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
TPM3-206ENST00000330188 MROH5Q6ZUA9 1318 aa17.1■□□□□ 0.33
TPM3-206ENST00000330188 AP5Z1O43299 807 aa17.1■□□□□ 0.33
TPM3-206ENST00000330188 PPFIA3O75145 1194 aa17.1■□□□□ 0.33
TPM3-206ENST00000330188 PUM3Q15397 648 aaKnown RBP17.1■□□□□ 0.33
TPM3-206ENST00000330188 SUSD4Q5VX71 490 aa17.1■□□□□ 0.33
TPM3-206ENST00000330188 CKAP2LQ8IYA6 745 aa17.1■□□□□ 0.33
TPM3-206ENST00000330188 LPIN2Q92539 896 aa17.1■□□□□ 0.33
TPM3-206ENST00000330188 CDCA7Q9BWT1 371 aaPredicted RBP17.1■□□□□ 0.33
TPM3-206ENST00000330188 WDR19Q8NEZ3 1342 aa17.1■□□□□ 0.33
TPM3-206ENST00000330188 DOCK2Q92608 1830 aa17.09■□□□□ 0.33
TPM3-206ENST00000330188 UQCRFS1P1P0C7P4 283 aa17.09■□□□□ 0.33
TPM3-206ENST00000330188 UBE3CQ15386 1083 aa17.09■□□□□ 0.33
TPM3-206ENST00000330188 FAM200AQ8TCP9 573 aa17.09■□□□□ 0.33
TPM3-206ENST00000330188 NBPF3Q9H094 633 aa17.09■□□□□ 0.33
TPM3-206ENST00000330188 CCDC87Q9NVE4 849 aa17.09■□□□□ 0.33
TPM3-206ENST00000330188 RCOR1Q9UKL0 485 aa17.09■□□□□ 0.33
TPM3-206ENST00000330188 C4AP0C0L4 1744 aa17.09■□□□□ 0.33
TPM3-206ENST00000330188 C4BP0C0L5 1744 aa17.09■□□□□ 0.33
TPM3-206ENST00000330188 SPATA31A1Q5TZJ5 1347 aa17.09■□□□□ 0.33
TPM3-206ENST00000330188 CICQ96RK0 1608 aaPredicted RBP17.09■□□□□ 0.33
TPM3-206ENST00000330188 FTOQ9C0B1 505 aaKnown RBP eCLIP17.09■□□□□ 0.337e-6■■□□□ 12.9
TPM3-206ENST00000330188 HPS5Q9UPZ3 1129 aa17.09■□□□□ 0.33
TPM3-206ENST00000330188 ZNF532Q9HCE3 1301 aa17.08■□□□□ 0.33
TPM3-206ENST00000330188 KLF18A0A0U1RQI7 1052 aa17.08■□□□□ 0.33
TPM3-206ENST00000330188 IDH1O75874 414 aaKnown RBP17.08■□□□□ 0.33
TPM3-206ENST00000330188 CRKLP46109 303 aaKnown RBP17.08■□□□□ 0.33
TPM3-206ENST00000330188 GUCY1B3Q02153 619 aa17.08■□□□□ 0.33
TPM3-206ENST00000330188 CEBPZQ03701 1054 aaKnown RBP17.08■□□□□ 0.33
TPM3-206ENST00000330188 DDB1Q16531 1140 aa17.08■□□□□ 0.33
TPM3-206ENST00000330188 ATL3Q6DD88 541 aa17.08■□□□□ 0.33
TPM3-206ENST00000330188 RALYLQ86SE5 291 aaKnown RBP17.08■□□□□ 0.33
TPM3-206ENST00000330188 ILDR1Q86SU0 546 aaPredicted RBP17.08■□□□□ 0.33
TPM3-206ENST00000330188 HELBQ8NG08 1087 aaPredicted RBP17.08■□□□□ 0.33
TPM3-206ENST00000330188 THRAP3Q9Y2W1 955 aaKnown RBP17.08■□□□□ 0.33
TPM3-206ENST00000330188 TCRBV5S4A2TA0A5A2 114 aa17.08■□□□□ 0.32
TPM3-206ENST00000330188 PDE6AP16499 860 aa17.08■□□□□ 0.32
TPM3-206ENST00000330188 USP28Q96RU2 1077 aa17.08■□□□□ 0.32
TPM3-206ENST00000330188 WWC3Q9ULE0 1092 aa17.08■□□□□ 0.32
TPM3-206ENST00000330188 LAMB2P55268 1798 aa17.08■□□□□ 0.32
TPM3-206ENST00000330188 MYH14Q7Z406 1995 aaKnown RBP17.07■□□□□ 0.32
TPM3-206ENST00000330188 GOLGA8BA8MQT2 603 aa17.07■□□□□ 0.32
TPM3-206ENST00000330188 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
TPM3-206ENST00000330188 ACSBG1Q96GR2 724 aa17.07■□□□□ 0.32
TPM3-206ENST00000330188 ZNF396Q96N95 335 aaPredicted RBP17.07■□□□□ 0.32
TPM3-206ENST00000330188 CAMTA2O94983 1202 aa17.06■□□□□ 0.32
TPM3-206ENST00000330188 TBC1D10CQ8IV04 446 aa17.06■□□□□ 0.32
TPM3-206ENST00000330188 MPNDQ8N594 471 aa17.06■□□□□ 0.32
TPM3-206ENST00000330188 UTP14AQ9BVJ6 771 aaKnown RBP17.06■□□□□ 0.32
TPM3-206ENST00000330188 A0A0G2JS52 829 aa17.06■□□□□ 0.32
TPM3-206ENST00000330188 ADAMTS2O95450 1211 aa17.06■□□□□ 0.32
TPM3-206ENST00000330188 SLC5A1P13866 664 aa17.06■□□□□ 0.32
TPM3-206ENST00000330188 PLCB2Q00722 1185 aa17.06■□□□□ 0.32
TPM3-206ENST00000330188 MARCH10Q8NA82 808 aaPredicted RBP17.06■□□□□ 0.32
TPM3-206ENST00000330188 LOC102724428A0A0B4J2F2 783 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 FAM177BA6PVY3 158 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 DHX16O60231 1041 aaKnown RBP17.05■□□□□ 0.32
TPM3-206ENST00000330188 SIK1P57059 783 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 ITPK1Q13572 414 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 ANO6Q4KMQ2 910 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 SEC31BQ9NQW1 1179 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 DENND2AQ9ULE3 1009 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 PARP10Q53GL7 1025 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 RAB11FIP4Q86YS3 637 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms