RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 KAT6BQ8WYB5 2073 aa23.26■■□□□ 1.31
SOX2-201ENST00000325404 ZSCAN25Q6NSZ9 544 aa23.26■■□□□ 1.31
SOX2-201ENST00000325404 ZBTB3Q9H5J0 574 aa23.26■■□□□ 1.31
SOX2-201ENST00000325404 BARGINQ6ZT62 677 aa23.26■■□□□ 1.31
SOX2-201ENST00000325404 DRC7Q8IY82 874 aa23.26■■□□□ 1.31
SOX2-201ENST00000325404 CCDC94Q9BW85 323 aaPredicted RBP23.26■■□□□ 1.31
SOX2-201ENST00000325404 AKAP2Q9Y2D5 859 aa23.26■■□□□ 1.31
SOX2-201ENST00000325404 ZNF710Q8N1W2 664 aa23.25■■□□□ 1.31
SOX2-201ENST00000325404 USP28Q96RU2 1077 aa23.25■■□□□ 1.31
SOX2-201ENST00000325404 GOLGA6L19H0YKK7 550 aa23.25■■□□□ 1.31
SOX2-201ENST00000325404 CTIFO43310 598 aaKnown RBP23.25■■□□□ 1.31
SOX2-201ENST00000325404 TRIM28Q13263 835 aaKnown RBP23.25■■□□□ 1.31
SOX2-201ENST00000325404 LRRC24Q50LG9 513 aa23.25■■□□□ 1.31
SOX2-201ENST00000325404 PKNOX2Q96KN3 472 aa23.25■■□□□ 1.31
SOX2-201ENST00000325404 ISCA1Q9BUE6 129 aa23.25■■□□□ 1.31
SOX2-201ENST00000325404 CEP126Q9P2H0 1117 aa23.25■■□□□ 1.31
SOX2-201ENST00000325404 ANO10Q9NW15 660 aa23.24■■□□□ 1.31
SOX2-201ENST00000325404 RTEL1Q9NZ71 1219 aa23.24■■□□□ 1.31
SOX2-201ENST00000325404 CLIP2Q9UDT6 1046 aa23.24■■□□□ 1.31
SOX2-201ENST00000325404 CARMIL3Q8ND23 1372 aa23.24■■□□□ 1.31
SOX2-201ENST00000325404 A0A1W2PQ27 194 aa23.24■■□□□ 1.31
SOX2-201ENST00000325404 A0A1W2PQ64 194 aa23.24■■□□□ 1.31
SOX2-201ENST00000325404 A0A1W2PQD8 194 aa23.24■■□□□ 1.31
SOX2-201ENST00000325404 KINO60870 393 aaKnown RBP23.24■■□□□ 1.31
SOX2-201ENST00000325404 WDR19Q8NEZ3 1342 aa23.24■■□□□ 1.31
SOX2-201ENST00000325404 CCDC158Q5M9N0 1113 aa23.23■■□□□ 1.31
SOX2-201ENST00000325404 ZNF330Q9Y3S2 320 aaPredicted RBP23.23■■□□□ 1.31
SOX2-201ENST00000325404 DHX16O60231 1041 aaKnown RBP23.23■■□□□ 1.31
SOX2-201ENST00000325404 GOLPH3LQ9H4A5 285 aa23.23■■□□□ 1.31
SOX2-201ENST00000325404 CCT2P78371 535 aaKnown RBP23.22■■□□□ 1.31
SOX2-201ENST00000325404 SYCP1Q15431 976 aa23.22■■□□□ 1.31
SOX2-201ENST00000325404 PLA2G12BQ9BX93 195 aa23.22■■□□□ 1.31
SOX2-201ENST00000325404 DOT1LQ8TEK3 1739 aa23.22■■□□□ 1.31
SOX2-201ENST00000325404 M0R2C6 588 aa23.22■■□□□ 1.31
SOX2-201ENST00000325404 ILDR1Q86SU0 546 aaPredicted RBP23.22■■□□□ 1.31
SOX2-201ENST00000325404 RIOK3O14730 519 aaKnown RBP23.21■■□□□ 1.31
SOX2-201ENST00000325404 ADALQ6DHV7 355 aa23.21■■□□□ 1.31
SOX2-201ENST00000325404 MARCH10Q8NA82 808 aaPredicted RBP23.21■■□□□ 1.31
SOX2-201ENST00000325404 OSBP2Q969R2 916 aa23.21■■□□□ 1.31
SOX2-201ENST00000325404 IMMTQ16891 758 aaKnown RBP23.21■■□□□ 1.31
SOX2-201ENST00000325404 KIF6Q6ZMV9 814 aa23.21■■□□□ 1.31
SOX2-201ENST00000325404 C8orf37Q96NL8 207 aa23.21■■□□□ 1.31
SOX2-201ENST00000325404 SLC4A9Q96Q91 983 aa23.21■■□□□ 1.31
SOX2-201ENST00000325404 BCL2L12Q9HB09 334 aa23.21■■□□□ 1.31
SOX2-201ENST00000325404 NRBP1Q9UHY1 535 aa23.21■■□□□ 1.31
SOX2-201ENST00000325404 FDPSP14324 419 aaKnown RBP23.2■■□□□ 1.3
SOX2-201ENST00000325404 NGLY1Q96IV0 654 aa23.2■■□□□ 1.3
SOX2-201ENST00000325404 ZMYND15Q9H091 742 aa23.2■■□□□ 1.3
SOX2-201ENST00000325404 NCOA5Q9HCD5 579 aaKnown RBP23.2■■□□□ 1.3
SOX2-201ENST00000325404 RBM6P78332 1123 aaKnown RBP23.2■■□□□ 1.3
SOX2-201ENST00000325404 CEBPZQ03701 1054 aaKnown RBP23.2■■□□□ 1.3
SOX2-201ENST00000325404 CCDC57Q2TAC2 916 aa23.2■■□□□ 1.3
SOX2-201ENST00000325404 SLFNL1Q499Z3 407 aa23.2■■□□□ 1.3
SOX2-201ENST00000325404 C11orf57Q6ZUT1 292 aaPredicted RBP23.2■■□□□ 1.3
SOX2-201ENST00000325404 MRPS27Q92552 414 aaKnown RBP23.2■■□□□ 1.3
SOX2-201ENST00000325404 ZNF594Q96JF6 807 aaPredicted RBP23.2■■□□□ 1.3
SOX2-201ENST00000325404 NAT10Q9H0A0 1025 aaKnown RBP23.2■■□□□ 1.3
SOX2-201ENST00000325404 CYP19A1P11511 503 aaPredicted RBP23.19■■□□□ 1.3
SOX2-201ENST00000325404 TCIRG1Q13488 830 aa23.19■■□□□ 1.3
SOX2-201ENST00000325404 FMR1NBQ8N0W7 255 aaPredicted RBP23.19■■□□□ 1.3
SOX2-201ENST00000325404 FSIP1Q8NA03 581 aa23.19■■□□□ 1.3
SOX2-201ENST00000325404 PAXBP1Q9Y5B6 917 aa23.19■■□□□ 1.3
SOX2-201ENST00000325404 A0A0G2JS52 829 aa23.19■■□□□ 1.3
SOX2-201ENST00000325404 SMTNL1A8MU46 457 aa23.19■■□□□ 1.3
SOX2-201ENST00000325404 YEATS4O95619 227 aa23.19■■□□□ 1.3
SOX2-201ENST00000325404 ME1P48163 572 aa23.19■■□□□ 1.3
SOX2-201ENST00000325404 LRMPQ12912 555 aa23.19■■□□□ 1.3
SOX2-201ENST00000325404 BRAPQ7Z569 592 aa23.19■■□□□ 1.3
SOX2-201ENST00000325404 CACTINQ8WUQ7 758 aaKnown RBP23.19■■□□□ 1.3
SOX2-201ENST00000325404 ANKRD7Q92527 254 aa23.19■■□□□ 1.3
SOX2-201ENST00000325404 TTC39AQ5SRH9 613 aa23.18■■□□□ 1.3
SOX2-201ENST00000325404 CEP57L1Q8IYX8 460 aa23.18■■□□□ 1.3
SOX2-201ENST00000325404 KCNG4Q8TDN1 519 aa23.18■■□□□ 1.3
SOX2-201ENST00000325404 APPBP2Q92624 585 aa23.18■■□□□ 1.3
SOX2-201ENST00000325404 PUS3Q9BZE2 481 aaKnown RBP23.18■■□□□ 1.3
SOX2-201ENST00000325404 POLR3EQ9NVU0 708 aa23.18■■□□□ 1.3
SOX2-201ENST00000325404 MB21D2Q8IYB1 491 aaPredicted RBP23.18■■□□□ 1.3
SOX2-201ENST00000325404 SMAP1Q8IYB5 467 aaPredicted RBP23.18■■□□□ 1.3
SOX2-201ENST00000325404 A0A0G2JLW4 131 aa23.17■■□□□ 1.3
SOX2-201ENST00000325404 BECN2A8MW95 431 aa23.17■■□□□ 1.3
SOX2-201ENST00000325404 FOXP2O15409 715 aa23.17■■□□□ 1.3
SOX2-201ENST00000325404 PCCAP05165 728 aaPredicted RBP23.17■■□□□ 1.3
SOX2-201ENST00000325404 LRRC8AQ8IWT6 810 aa23.17■■□□□ 1.3
SOX2-201ENST00000325404 DHX40Q8IX18 779 aaKnown RBP23.17■■□□□ 1.3
SOX2-201ENST00000325404 XAGE2Q96GT9 111 aa23.17■■□□□ 1.3
SOX2-201ENST00000325404 BPIFA3Q9BQP9 254 aa23.17■■□□□ 1.3
SOX2-201ENST00000325404 FTOQ9C0B1 505 aaKnown RBP eCLIP23.17■■□□□ 1.3
SOX2-201ENST00000325404 PCDHA7Q9UN72 937 aa23.17■■□□□ 1.3
SOX2-201ENST00000325404 CSF1RP07333 972 aa23.17■■□□□ 1.3
SOX2-201ENST00000325404 TTLL5Q6EMB2 1281 aa23.17■■□□□ 1.3
SOX2-201ENST00000325404 LINC00301Q8NCQ3 95 aa23.17■■□□□ 1.3
SOX2-201ENST00000325404 ACSBG1Q96GR2 724 aa23.17■■□□□ 1.3
SOX2-201ENST00000325404 KCND1Q9NSA2 647 aa23.17■■□□□ 1.3
SOX2-201ENST00000325404 VPS72Q15906 364 aa23.16■■□□□ 1.3
SOX2-201ENST00000325404 FBXO18Q8NFZ0 1043 aa23.16■■□□□ 1.3
SOX2-201ENST00000325404 DDX60Q8IY21 1712 aaKnown RBP23.16■■□□□ 1.3
SOX2-201ENST00000325404 CCDC144BQ3MJ40 725 aa23.16■■□□□ 1.3
SOX2-201ENST00000325404 GORABQ5T7V8 394 aa23.16■■□□□ 1.3
SOX2-201ENST00000325404 CCDC144CPQ8IYA2 1237 aa23.16■■□□□ 1.3
SOX2-201ENST00000325404 BCL9LQ86UU0 1499 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms