RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 ERCC5P28715 1186 aaPredicted RBP13.67□□□□□ -0.22
FARP1-201ENST00000319562 IRX4P78413 519 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 ZGPATQ8N5A5 531 aaKnown RBP13.67□□□□□ -0.22
FARP1-201ENST00000319562 KIFAP3Q92845 792 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 ERO1AQ96HE7 468 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 IFT20Q8IY31 132 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 RNF10Q8N5U6 811 aaKnown RBP13.67□□□□□ -0.22
FARP1-201ENST00000319562 RUSC2Q8N2Y8 1516 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 GOLGA6CA6NDK9 693 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 GOLGA6DP0CG33 693 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 GOLGA6AQ9NYA3 693 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 STX8Q9UNK0 236 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 CETN3O15182 167 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 PPP1R2P41236 205 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 HAND2P61296 217 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 RUFY4Q6ZNE9 571 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 UQCRFS1P1P0C7P4 283 aa13.67□□□□□ -0.22
FARP1-201ENST00000319562 CAMSAP2Q08AD1 1489 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 PTCD1O75127 700 aaKnown RBP13.66□□□□□ -0.22
FARP1-201ENST00000319562 TRIM14Q14142 442 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 VWA3BQ502W6 1294 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 ERCC3P19447 782 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 HPDP32754 393 aaPredicted RBP13.66□□□□□ -0.22
FARP1-201ENST00000319562 SPTLC2O15270 562 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 SYT10Q6XYQ8 523 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 VCX3AQ9NNX9 186 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 PLCB1Q9NQ66 1216 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 AGTPBP1Q9UPW5 1226 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 TRIM75PA6NK02 468 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 E7EVH7 732 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 ITIH3Q06033 890 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 BAG1Q99933 345 aaPredicted RBP13.66□□□□□ -0.22
FARP1-201ENST00000319562 AKR1B15C9JRZ8 316 aaPredicted RBP13.66□□□□□ -0.22
FARP1-201ENST00000319562 CCDC122Q5T0U0 273 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 HEATR3Q7Z4Q2 680 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 XRCC6P12956 609 aaKnown RBP eCLIP13.66□□□□□ -0.225e-8■■■■□ 22.3
FARP1-201ENST00000319562 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
FARP1-201ENST00000319562 EVCP57679 992 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 KARSQ15046 597 aaKnown RBP13.66□□□□□ -0.22
FARP1-201ENST00000319562 PRR16Q569H4 304 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 B4DLN1 442 aa13.66□□□□□ -0.22
FARP1-201ENST00000319562 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
FARP1-201ENST00000319562 ZNF131P52739 623 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 TERF1P54274 439 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 PDE1CQ14123 709 aaPredicted RBP13.65□□□□□ -0.22
FARP1-201ENST00000319562 GTF3C6Q969F1 213 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 F13A1P00488 732 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 TRIM27P14373 513 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 UAP1Q16222 522 aaPredicted RBP13.65□□□□□ -0.22
FARP1-201ENST00000319562 ATL3Q6DD88 541 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 NUTM2AQ8IVF1 878 aaPredicted RBP13.65□□□□□ -0.22
FARP1-201ENST00000319562 FRMD4BQ9Y2L6 1034 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 CCDC61Q9Y6R9 512 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 WHAMMP3Q1A5X7 153 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 SRGAP1Q7Z6B7 1085 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 HVCN1Q96D96 273 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
FARP1-201ENST00000319562 CALM1P0DP23 149 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 CALM2P0DP24 149 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 CALM3P0DP25 149 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 UBL4BQ8N7F7 174 aa13.65□□□□□ -0.22
FARP1-201ENST00000319562 NUTM2BA6NNL0 878 aaPredicted RBP13.64□□□□□ -0.23
FARP1-201ENST00000319562 NUTM2EB1AL46 878 aaPredicted RBP13.64□□□□□ -0.23
FARP1-201ENST00000319562 FLIIQ13045 1269 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 LDHAL6AQ6ZMR3 332 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 SUDS3Q9H7L9 328 aaPredicted RBP13.64□□□□□ -0.23
FARP1-201ENST00000319562 PIK3R4Q99570 1358 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 MARCKSP29966 332 aaPredicted RBP13.64□□□□□ -0.23
FARP1-201ENST00000319562 SNX21Q969T3 373 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 KRT2P35908 639 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 IFNKQ9P0W0 207 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 SPDYE3A6NKU9 549 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 MAP3K21Q5TCX8 1036 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 CCDC117Q8IWD4 279 aaPredicted RBP13.64□□□□□ -0.23
FARP1-201ENST00000319562 TEX13AQ9BXU3 409 aaPredicted RBP13.64□□□□□ -0.23
FARP1-201ENST00000319562 I3L4J1 428 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 STK10O94804 968 aaKnown RBP13.64□□□□□ -0.23
FARP1-201ENST00000319562 DHX58Q96C10 678 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 RTL9Q8NET4 1388 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 CCDC141Q6ZP82 1450 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 KRT79Q5XKE5 535 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 C8orf74Q6P047 294 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 ZNF365Q70YC5 407 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 NAPGQ99747 312 aaPredicted RBP13.64□□□□□ -0.23
FARP1-201ENST00000319562 PRIM1P49642 420 aaKnown RBP13.64□□□□□ -0.23
FARP1-201ENST00000319562 NAPAP54920 295 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 NCAPGQ9BPX3 1015 aa13.64□□□□□ -0.23
FARP1-201ENST00000319562 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.63□□□□□ -0.23
FARP1-201ENST00000319562 KIFC2Q96AC6 838 aa13.63□□□□□ -0.23
FARP1-201ENST00000319562 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
FARP1-201ENST00000319562 FAM204AQ9H8W3 233 aa13.63□□□□□ -0.23
FARP1-201ENST00000319562 F6X3S4 739 aa13.63□□□□□ -0.23
FARP1-201ENST00000319562 NUCB1Q02818 461 aa13.63□□□□□ -0.23
FARP1-201ENST00000319562 BRAPQ7Z569 592 aa13.63□□□□□ -0.23
FARP1-201ENST00000319562 CCDC65Q8IXS2 484 aa13.63□□□□□ -0.23
FARP1-201ENST00000319562 HAUS7Q99871 368 aa13.63□□□□□ -0.23
FARP1-201ENST00000319562 RILPL1Q5EBL4 403 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms