RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 CLEC11AQ9Y240 323 aa20.54■□□□□ 0.88
LRRC42-201ENST00000319223 SMC1BQ8NDV3 1235 aa20.53■□□□□ 0.88
LRRC42-201ENST00000319223 FAM205AQ6ZU69 1335 aa20.53■□□□□ 0.88
LRRC42-201ENST00000319223 USP17L8P0C7I0 530 aa20.53■□□□□ 0.88
LRRC42-201ENST00000319223 PHKA1P46020 1223 aa20.53■□□□□ 0.88
LRRC42-201ENST00000319223 ZNF280AP59817 542 aaPredicted RBP20.53■□□□□ 0.88
LRRC42-201ENST00000319223 CHADLQ6NUI6 762 aa20.53■□□□□ 0.88
LRRC42-201ENST00000319223 KIAA0825Q8IV33 1275 aa20.53■□□□□ 0.88
LRRC42-201ENST00000319223 XAGE2Q96GT9 111 aa20.53■□□□□ 0.88
LRRC42-201ENST00000319223 AKAP2Q9Y2D5 859 aa20.53■□□□□ 0.88
LRRC42-201ENST00000319223 CHAF1AQ13111 956 aaPredicted RBP20.52■□□□□ 0.88
LRRC42-201ENST00000319223 MAP1SQ66K74 1059 aaPredicted RBP20.52■□□□□ 0.88
LRRC42-201ENST00000319223 NEUROD6Q96NK8 337 aa20.52■□□□□ 0.88
LRRC42-201ENST00000319223 PCDHB15Q9Y5E8 787 aa20.52■□□□□ 0.88
LRRC42-201ENST00000319223 FSTL1Q12841 308 aa20.51■□□□□ 0.87
LRRC42-201ENST00000319223 MYO3BQ8WXR4 1341 aa20.51■□□□□ 0.87
LRRC42-201ENST00000319223 GRIK5Q16478 980 aa20.5■□□□□ 0.87
LRRC42-201ENST00000319223 CCDC102BQ68D86 513 aa20.5■□□□□ 0.87
LRRC42-201ENST00000319223 ARAP2Q8WZ64 1704 aa20.5■□□□□ 0.87
LRRC42-201ENST00000319223 COL1A1P02452 1464 aaPredicted RBP20.5■□□□□ 0.87
LRRC42-201ENST00000319223 F8W031 263 aaPredicted RBP20.5■□□□□ 0.87
LRRC42-201ENST00000319223 HMMRO75330 724 aa20.5■□□□□ 0.87
LRRC42-201ENST00000319223 FRAT2O75474 233 aaPredicted RBP20.5■□□□□ 0.87
LRRC42-201ENST00000319223 KIF4BQ2VIQ3 1234 aa20.5■□□□□ 0.87
LRRC42-201ENST00000319223 TNNI3KQ59H18 835 aa20.5■□□□□ 0.87
LRRC42-201ENST00000319223 MFSD14BQ5SR56 506 aa20.5■□□□□ 0.87
LRRC42-201ENST00000319223 FPGT-TNNI3KV9GXZ4 949 aa20.5■□□□□ 0.87
LRRC42-201ENST00000319223 ASTN2O75129 1339 aaPredicted RBP20.49■□□□□ 0.87
LRRC42-201ENST00000319223 FKBP1AP62942 108 aaKnown RBP20.49■□□□□ 0.87
LRRC42-201ENST00000319223 MYOZ2Q9NPC6 264 aa20.49■□□□□ 0.87
LRRC42-201ENST00000319223 APBB1O00213 710 aa20.48■□□□□ 0.87
LRRC42-201ENST00000319223 ITGBL1O95965 494 aaPredicted RBP20.48■□□□□ 0.87
LRRC42-201ENST00000319223 GPR108Q9NPR9 543 aa20.48■□□□□ 0.87
LRRC42-201ENST00000319223 PGAP2Q9UHJ9 254 aa20.48■□□□□ 0.87
LRRC42-201ENST00000319223 CNTROBQ8N137 903 aa20.47■□□□□ 0.87
LRRC42-201ENST00000319223 EAF2Q96CJ1 260 aaPredicted RBP20.47■□□□□ 0.87
LRRC42-201ENST00000319223 DBNDD2Q9BQY9 259 aa20.47■□□□□ 0.87
LRRC42-201ENST00000319223 PCDHAC2Q9Y5I4 1007 aa20.47■□□□□ 0.87
LRRC42-201ENST00000319223 FMR1Q06787 632 aaKnown RBP eCLIP20.47■□□□□ 0.87
LRRC42-201ENST00000319223 RHPN1Q8TCX5 695 aa20.47■□□□□ 0.87
LRRC42-201ENST00000319223 CCDC8Q9H0W5 538 aaPredicted RBP20.47■□□□□ 0.87
LRRC42-201ENST00000319223 IL1RAPL2Q9NP60 686 aa20.47■□□□□ 0.87
LRRC42-201ENST00000319223 TLR7Q9NYK1 1049 aaKnown RBP20.47■□□□□ 0.87
LRRC42-201ENST00000319223 OGFOD1Q8N543 542 aa20.46■□□□□ 0.87
LRRC42-201ENST00000319223 EXOC6Q8TAG9 804 aa20.46■□□□□ 0.87
LRRC42-201ENST00000319223 RASGRF1Q13972 1273 aa20.45■□□□□ 0.86
LRRC42-201ENST00000319223 SCARF1Q14162 830 aa20.45■□□□□ 0.86
LRRC42-201ENST00000319223 NBPF9Q3BBW0 867 aa20.45■□□□□ 0.86
LRRC42-201ENST00000319223 DLK2Q6UY11 383 aa20.45■□□□□ 0.86
LRRC42-201ENST00000319223 GNL3LQ9NVN8 582 aaKnown RBP20.45■□□□□ 0.86
LRRC42-201ENST00000319223 HSPA6P17066 643 aa20.44■□□□□ 0.86
LRRC42-201ENST00000319223 IRX6P78412 446 aaPredicted RBP20.44■□□□□ 0.86
LRRC42-201ENST00000319223 HSP90AB4PQ58FF6 505 aa20.44■□□□□ 0.86
LRRC42-201ENST00000319223 ERC1Q8IUD2 1116 aa20.44■□□□□ 0.86
LRRC42-201ENST00000319223 ZC3H15Q8WU90 426 aaKnown RBP20.44■□□□□ 0.86
LRRC42-201ENST00000319223 DBNLQ9UJU6 430 aaKnown RBP20.44■□□□□ 0.86
LRRC42-201ENST00000319223 GORABQ5T7V8 394 aa20.44■□□□□ 0.86
LRRC42-201ENST00000319223 PI16Q6UXB8 463 aa20.44■□□□□ 0.86
LRRC42-201ENST00000319223 GLIS2Q9BZE0 524 aaPredicted RBP20.44■□□□□ 0.86
LRRC42-201ENST00000319223 HDAC9Q9UKV0 1011 aa20.44■□□□□ 0.86
LRRC42-201ENST00000319223 TTF2Q9UNY4 1162 aaKnown RBP20.44■□□□□ 0.86
LRRC42-201ENST00000319223 PASKQ96RG2 1323 aa20.43■□□□□ 0.86
LRRC42-201ENST00000319223 TRAF5O00463 557 aa20.43■□□□□ 0.86
LRRC42-201ENST00000319223 WNT10BO00744 389 aa20.43■□□□□ 0.86
LRRC42-201ENST00000319223 TBC1D22AQ8WUA7 517 aa20.43■□□□□ 0.86
LRRC42-201ENST00000319223 ZBED3Q96IU2 234 aaPredicted RBP20.43■□□□□ 0.86
LRRC42-201ENST00000319223 BCL11AQ9H165 835 aa20.43■□□□□ 0.86
LRRC42-201ENST00000319223 DENND2AQ9ULE3 1009 aa20.43■□□□□ 0.86
LRRC42-201ENST00000319223 SCAF8Q9UPN6 1271 aaKnown RBP20.43■□□□□ 0.86
LRRC42-201ENST00000319223 MYH13Q9UKX3 1938 aa20.43■□□□□ 0.86
LRRC42-201ENST00000319223 AOX1Q06278 1338 aa20.43■□□□□ 0.86
LRRC42-201ENST00000319223 SEMA3EO15041 775 aa20.42■□□□□ 0.86
LRRC42-201ENST00000319223 HTRA3P83110 453 aa20.42■□□□□ 0.86
LRRC42-201ENST00000319223 WDR66Q8TBY9 1149 aa20.42■□□□□ 0.86
LRRC42-201ENST00000319223 KIF1BPQ96EK5 621 aa20.42■□□□□ 0.86
LRRC42-201ENST00000319223 DCTPP1Q9H773 170 aa20.42■□□□□ 0.86
LRRC42-201ENST00000319223 GGA3Q9NZ52 723 aa20.42■□□□□ 0.86
LRRC42-201ENST00000319223 HMG20BQ9P0W2 317 aa20.42■□□□□ 0.86
LRRC42-201ENST00000319223 ZBTB22O15209 634 aa20.41■□□□□ 0.86
LRRC42-201ENST00000319223 RAB11FIP3O75154 756 aa20.41■□□□□ 0.86
LRRC42-201ENST00000319223 ARID4AP29374 1257 aaPredicted RBP20.41■□□□□ 0.86
LRRC42-201ENST00000319223 CFAP100Q494V2 611 aa20.41■□□□□ 0.86
LRRC42-201ENST00000319223 ANGEL2Q5VTE6 544 aaKnown RBP20.41■□□□□ 0.86
LRRC42-201ENST00000319223 AACSQ86V21 672 aa20.41■□□□□ 0.86
LRRC42-201ENST00000319223 POLR2AP24928 1970 aaKnown RBP20.41■□□□□ 0.86
LRRC42-201ENST00000319223 MCAMP43121 646 aa20.41■□□□□ 0.86
LRRC42-201ENST00000319223 USP48Q86UV5 1035 aa20.41■□□□□ 0.86
LRRC42-201ENST00000319223 PRMT6Q96LA8 375 aaPredicted RBP20.41■□□□□ 0.86
LRRC42-201ENST00000319223 SMARCA5O60264 1052 aaPredicted RBP20.4■□□□□ 0.86
LRRC42-201ENST00000319223 PRDX5P30044 214 aa20.4■□□□□ 0.86
LRRC42-201ENST00000319223 MMP14P50281 582 aa20.4■□□□□ 0.86
LRRC42-201ENST00000319223 DLGAP5Q15398 846 aa20.4■□□□□ 0.86
LRRC42-201ENST00000319223 ADM5C9JUS6 153 aa20.39■□□□□ 0.86
LRRC42-201ENST00000319223 APLP1P51693 650 aa20.39■□□□□ 0.86
LRRC42-201ENST00000319223 MTMR14Q8NCE2 650 aa20.39■□□□□ 0.86
LRRC42-201ENST00000319223 CRKP46108 304 aa20.39■□□□□ 0.85
LRRC42-201ENST00000319223 CCDC158Q5M9N0 1113 aa20.39■□□□□ 0.85
LRRC42-201ENST00000319223 TTC39AQ5SRH9 613 aa20.39■□□□□ 0.85
LRRC42-201ENST00000319223 CDC37L1Q7L3B6 337 aa20.39■□□□□ 0.85
LRRC42-201ENST00000319223 CLASRPQ8N2M8 674 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms