RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 CABP4P57796 275 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 DDB1Q16531 1140 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 KIAA1328Q86T90 577 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 ARHGEF25Q86VW2 580 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 USP28Q96RU2 1077 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 WWC3Q9ULE0 1092 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 SETBP1Q9Y6X0 1596 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 MST1RQ04912 1400 aa8.66□□□□□ -1.02
CDHR3-201ENST00000317716 KLF18A0A0U1RQI7 1052 aa8.65□□□□□ -1.02
CDHR3-201ENST00000317716 DHX16O60231 1041 aaKnown RBP8.65□□□□□ -1.02
CDHR3-201ENST00000317716 WDHD1O75717 1129 aaPredicted RBP8.65□□□□□ -1.02
CDHR3-201ENST00000317716 FANCCQ00597 558 aa8.65□□□□□ -1.02
CDHR3-201ENST00000317716 CLEC17AQ6ZS10 378 aa8.65□□□□□ -1.02
CDHR3-201ENST00000317716 TICAM2Q86XR7 235 aa8.65□□□□□ -1.02
CDHR3-201ENST00000317716 GOLGA1Q92805 767 aa8.65□□□□□ -1.02
CDHR3-201ENST00000317716 NUP88Q99567 741 aaPredicted RBP8.65□□□□□ -1.02
CDHR3-201ENST00000317716 SPTLC3Q9NUV7 552 aa8.65□□□□□ -1.02
CDHR3-201ENST00000317716 RGPD8O14715 1765 aaPredicted RBP8.65□□□□□ -1.02
CDHR3-201ENST00000317716 SSBP05455 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
CDHR3-201ENST00000317716 MTX1Q13505 466 aa8.65□□□□□ -1.02
CDHR3-201ENST00000317716 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.65□□□□□ -1.03
CDHR3-201ENST00000317716 IDH1O75874 414 aaKnown RBP8.65□□□□□ -1.03
CDHR3-201ENST00000317716 PNMA6AP0CW24 399 aaPredicted RBP8.65□□□□□ -1.03
CDHR3-201ENST00000317716 WWC2Q6AWC2 1192 aa8.65□□□□□ -1.03
CDHR3-201ENST00000317716 GIMAP7Q8NHV1 300 aa8.65□□□□□ -1.03
CDHR3-201ENST00000317716 ZSCAN16Q9H4T2 348 aaPredicted RBP8.65□□□□□ -1.03
CDHR3-201ENST00000317716 LGR6Q9HBX8 967 aa8.65□□□□□ -1.03
CDHR3-201ENST00000317716 NEURL4Q96JN8 1562 aa8.65□□□□□ -1.03
CDHR3-201ENST00000317716 A0A0D9SFI3 127 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 SPTLC2O15270 562 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 ZEB2O60315 1214 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 RAD51AP2Q09MP3 1159 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 ZNF827Q17R98 1081 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 CCDC181Q5TID7 509 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 UBE3BQ7Z3V4 1068 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 TMEM51Q9NW97 253 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 RGS12O14924 1447 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 ARHGEF28Q8N1W1 1705 aaKnown RBP8.64□□□□□ -1.03
CDHR3-201ENST00000317716 FLT4P35916 1363 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 FAM160A1Q05DH4 1040 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 SART3Q15020 963 aaKnown RBP8.64□□□□□ -1.03
CDHR3-201ENST00000317716 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.64□□□□□ -1.03
CDHR3-201ENST00000317716 NRXN3Q9Y4C0 1643 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 RPS6KB1P23443 525 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 CDR1P51861 262 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 DPCR1Q3MIW9 517 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 TTC19Q6DKK2 380 aaPredicted RBP8.64□□□□□ -1.03
CDHR3-201ENST00000317716 ZCRB1Q8TBF4 217 aaKnown RBP8.64□□□□□ -1.03
CDHR3-201ENST00000317716 PPP1R13BQ96KQ4 1090 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 USP44Q9H0E7 712 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 PDE11AQ9HCR9 933 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 BCCIPQ9P287 314 aaKnown RBP eCLIP8.64□□□□□ -1.03
CDHR3-201ENST00000317716 GUCA1BQ9UMX6 200 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 ARHGEF10O15013 1369 aa8.64□□□□□ -1.03
CDHR3-201ENST00000317716 CHL1O00533 1208 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 COBLO75128 1261 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 ODF2Q5BJF6 829 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 TTC39AQ5SRH9 613 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 ILDR1Q86SU0 546 aaPredicted RBP8.63□□□□□ -1.03
CDHR3-201ENST00000317716 NFATC2IPQ8NCF5 419 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 BAG1Q99933 345 aaPredicted RBP8.63□□□□□ -1.03
CDHR3-201ENST00000317716 LSG1Q9H089 658 aaKnown RBP8.63□□□□□ -1.03
CDHR3-201ENST00000317716 SHTN1A0MZ66 631 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 CAVIN2O95810 425 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 SLFN14P0C7P3 912 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 IL2RBP14784 551 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 ETF1P62495 437 aaKnown RBP8.63□□□□□ -1.03
CDHR3-201ENST00000317716 ST5P78524 1137 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 PPP1R1BQ9UD71 204 aaPredicted RBP8.63□□□□□ -1.03
CDHR3-201ENST00000317716 U3KPZ7 1027 aaPredicted RBP8.63□□□□□ -1.03
CDHR3-201ENST00000317716 NCOA3Q9Y6Q9 1424 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 IFIT1P09914 478 aaKnown RBP8.63□□□□□ -1.03
CDHR3-201ENST00000317716 ATP1A3P13637 1013 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 LIG3P49916 1009 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 EIF5P55010 431 aaKnown RBP8.63□□□□□ -1.03
CDHR3-201ENST00000317716 PSMB7Q99436 277 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 JADE2Q9NQC1 790 aa8.63□□□□□ -1.03
CDHR3-201ENST00000317716 MED14O60244 1454 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 ERICH2A1L162 156 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 CTAGE15A4D2H0 777 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 CTAGE8P0CG41 777 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 CCT6AP40227 531 aaKnown RBP8.62□□□□□ -1.03
CDHR3-201ENST00000317716 CCDC102BQ68D86 513 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 CTAGE6Q86UF2 777 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 CEP57Q86XR8 500 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 CTAGE4Q8IX94 777 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 ANKRD7Q92527 254 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 PUS7Q96PZ0 661 aaKnown RBP8.62□□□□□ -1.03
CDHR3-201ENST00000317716 MARCH6O60337 910 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 ZMYND10O75800 440 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 CHMP4BP1P59074 171 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 TDRD7Q8NHU6 1098 aaKnown RBP8.62□□□□□ -1.03
CDHR3-201ENST00000317716 STAMQ92783 540 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 GJB4Q9NTQ9 266 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 RRP15Q9Y3B9 282 aaKnown RBP8.62□□□□□ -1.03
CDHR3-201ENST00000317716 A0A1B0GUL7 405 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 MYO1CO00159 1063 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 KCNQ3O43525 872 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 MAPK8IP1Q9UQF2 711 aa8.62□□□□□ -1.03
CDHR3-201ENST00000317716 TECPR2O15040 1411 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms