RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 DOCK2Q92608 1830 aa17.06■□□□□ 0.32
MSRA-201ENST00000317173 DNAJC2Q99543 621 aaKnown RBP17.06■□□□□ 0.32
MSRA-201ENST00000317173 RTFDC1Q9BY42 306 aaPredicted RBP17.06■□□□□ 0.32
MSRA-201ENST00000317173 IRS2Q9Y4H2 1338 aa17.06■□□□□ 0.32
MSRA-201ENST00000317173 PDS5AQ29RF7 1337 aaKnown RBP17.05■□□□□ 0.32
MSRA-201ENST00000317173 FZD9O00144 591 aa17.05■□□□□ 0.32
MSRA-201ENST00000317173 CHMLP26374 656 aa17.05■□□□□ 0.32
MSRA-201ENST00000317173 MCAMP43121 646 aa17.05■□□□□ 0.32
MSRA-201ENST00000317173 FBXO33Q7Z6M2 555 aa17.05■□□□□ 0.32
MSRA-201ENST00000317173 VPS37DQ86XT2 251 aa17.05■□□□□ 0.32
MSRA-201ENST00000317173 LARGE2Q8N3Y3 721 aa17.05■□□□□ 0.32
MSRA-201ENST00000317173 MPNDQ8N594 471 aa17.05■□□□□ 0.32
MSRA-201ENST00000317173 KBTBD3Q8NAB2 608 aa17.05■□□□□ 0.32
MSRA-201ENST00000317173 FSD1Q9BTV5 496 aa17.05■□□□□ 0.32
MSRA-201ENST00000317173 UPF2Q9HAU5 1272 aaKnown RBP17.05■□□□□ 0.32
MSRA-201ENST00000317173 TSHZ2Q9NRE2 1034 aa17.05■□□□□ 0.32
MSRA-201ENST00000317173 MED23Q9ULK4 1368 aa17.04■□□□□ 0.32
MSRA-201ENST00000317173 FAM84BQ96KN1 310 aaPredicted RBP17.04■□□□□ 0.32
MSRA-201ENST00000317173 GOLIM4O00461 696 aa17.03■□□□□ 0.32
MSRA-201ENST00000317173 PPIP5K2O43314 1243 aa17.03■□□□□ 0.32
MSRA-201ENST00000317173 DDNO94850 711 aaPredicted RBP17.03■□□□□ 0.32
MSRA-201ENST00000317173 UFL1O94874 794 aa17.03■□□□□ 0.32
MSRA-201ENST00000317173 HIBADHP31937 336 aaKnown RBP17.03■□□□□ 0.32
MSRA-201ENST00000317173 BCAMP50895 628 aa17.03■□□□□ 0.32
MSRA-201ENST00000317173 SCARF1Q14162 830 aa17.03■□□□□ 0.32
MSRA-201ENST00000317173 SLC51AQ86UW1 340 aa17.03■□□□□ 0.32
MSRA-201ENST00000317173 NIM1KQ8IY84 436 aa17.03■□□□□ 0.32
MSRA-201ENST00000317173 TBC1D16Q8TBP0 767 aa17.03■□□□□ 0.32
MSRA-201ENST00000317173 RUFY2Q8WXA3 655 aa17.03■□□□□ 0.32
MSRA-201ENST00000317173 L3MBTL3Q96JM7 780 aaPredicted RBP17.03■□□□□ 0.32
MSRA-201ENST00000317173 DIAPH3Q9NSV4 1193 aa17.03■□□□□ 0.32
MSRA-201ENST00000317173 DUOX1Q9NRD9 1551 aa17.03■□□□□ 0.32
MSRA-201ENST00000317173 ZNF541Q9H0D2 1346 aa17.02■□□□□ 0.32
MSRA-201ENST00000317173 IQCA1LA6NCM1 817 aa17.02■□□□□ 0.32
MSRA-201ENST00000317173 ZAP70P43403 619 aa17.02■□□□□ 0.32
MSRA-201ENST00000317173 GYG1P46976 350 aa17.02■□□□□ 0.32
MSRA-201ENST00000317173 EIF6P56537 245 aaKnown RBP17.02■□□□□ 0.32
MSRA-201ENST00000317173 FSTL1Q12841 308 aa17.02■□□□□ 0.32
MSRA-201ENST00000317173 RASGRF1Q13972 1273 aa17.02■□□□□ 0.32
MSRA-201ENST00000317173 SPATA5Q8NB90 893 aa17.02■□□□□ 0.32
MSRA-201ENST00000317173 HMG20BQ9P0W2 317 aa17.02■□□□□ 0.32
MSRA-201ENST00000317173 DENND2AQ9ULE3 1009 aa17.02■□□□□ 0.32
MSRA-201ENST00000317173 RAD50Q92878 1312 aa17.02■□□□□ 0.31
MSRA-201ENST00000317173 EPB41L2O43491 1005 aaKnown RBP17.01■□□□□ 0.31
MSRA-201ENST00000317173 IGSF3O75054 1194 aa17.01■□□□□ 0.31
MSRA-201ENST00000317173 REC8O95072 547 aa17.01■□□□□ 0.31
MSRA-201ENST00000317173 HSPA6P17066 643 aa17.01■□□□□ 0.31
MSRA-201ENST00000317173 ZNF804AQ7Z570 1209 aa17.01■□□□□ 0.31
MSRA-201ENST00000317173 GPC2Q8N158 579 aa17.01■□□□□ 0.31
MSRA-201ENST00000317173 ESYT1Q9BSJ8 1104 aa17.01■□□□□ 0.31
MSRA-201ENST00000317173 POTECB2RU33 542 aa17.01■□□□□ 0.31
MSRA-201ENST00000317173 ZFYP08048 801 aaPredicted RBP17.01■□□□□ 0.31
MSRA-201ENST00000317173 AOC3Q16853 763 aa17.01■□□□□ 0.31
MSRA-201ENST00000317173 SMC1BQ8NDV3 1235 aa17.01■□□□□ 0.31
MSRA-201ENST00000317173 EDC3Q96F86 508 aaKnown RBP17.01■□□□□ 0.31
MSRA-201ENST00000317173 EYA3Q99504 573 aa17.01■□□□□ 0.31
MSRA-201ENST00000317173 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.01■□□□□ 0.31
MSRA-201ENST00000317173 POLLQ9UGP5 575 aa17.01■□□□□ 0.31
MSRA-201ENST00000317173 MYO5AQ9Y4I1 1855 aaKnown RBP17■□□□□ 0.31
MSRA-201ENST00000317173 WTIPA6NIX2 430 aaPredicted RBP17■□□□□ 0.31
MSRA-201ENST00000317173 C6orf229H3BNL8 230 aa17■□□□□ 0.31
MSRA-201ENST00000317173 SEC24BO95487 1268 aa17■□□□□ 0.31
MSRA-201ENST00000317173 KLRK1P26718 216 aa17■□□□□ 0.31
MSRA-201ENST00000317173 KIAA2012Q0VF49 1180 aa17■□□□□ 0.31
MSRA-201ENST00000317173 ZSCAN25Q6NSZ9 544 aa17■□□□□ 0.31
MSRA-201ENST00000317173 SNRKQ9NRH2 765 aa17■□□□□ 0.31
MSRA-201ENST00000317173 NDUFB9Q9Y6M9 179 aa17■□□□□ 0.31
MSRA-201ENST00000317173 COL4A5P29400 1685 aa16.99■□□□□ 0.31
MSRA-201ENST00000317173 CYP2E1P05181 493 aaPredicted RBP16.99■□□□□ 0.31
MSRA-201ENST00000317173 MFAP1P55081 439 aaKnown RBP16.99■□□□□ 0.31
MSRA-201ENST00000317173 ANTXR1Q9H6X2 564 aa16.99■□□□□ 0.31
MSRA-201ENST00000317173 SCN4AP35499 1836 aa16.99■□□□□ 0.31
MSRA-201ENST00000317173 SGSM2O43147 1006 aa16.98■□□□□ 0.31
MSRA-201ENST00000317173 TMED8Q6PL24 325 aaPredicted RBP16.98■□□□□ 0.31
MSRA-201ENST00000317173 PI16Q6UXB8 463 aa16.98■□□□□ 0.31
MSRA-201ENST00000317173 TXNRD3Q86VQ6 643 aa16.98■□□□□ 0.31
MSRA-201ENST00000317173 TDRD7Q8NHU6 1098 aaKnown RBP16.98■□□□□ 0.31
MSRA-201ENST00000317173 ZNRF3Q9ULT6 936 aa16.98■□□□□ 0.31
MSRA-201ENST00000317173 FRAT2O75474 233 aaPredicted RBP16.97■□□□□ 0.31
MSRA-201ENST00000317173 IL1R1P14778 569 aa16.97■□□□□ 0.31
MSRA-201ENST00000317173 CWC27Q6UX04 472 aaKnown RBP16.97■□□□□ 0.31
MSRA-201ENST00000317173 ZC3H12CQ9C0D7 883 aaKnown RBP16.97■□□□□ 0.31
MSRA-201ENST00000317173 COA1Q9GZY4 146 aa16.97■□□□□ 0.31
MSRA-201ENST00000317173 HACL1Q9UJ83 578 aa16.97■□□□□ 0.31
MSRA-201ENST00000317173 MAST2Q6P0Q8 1798 aa16.97■□□□□ 0.31
MSRA-201ENST00000317173 COL1A1P02452 1464 aaPredicted RBP16.97■□□□□ 0.31
MSRA-201ENST00000317173 RNF113AO15541 343 aaKnown RBP16.96■□□□□ 0.31
MSRA-201ENST00000317173 MAP3K12Q12852 859 aa16.96■□□□□ 0.31
MSRA-201ENST00000317173 WASHC4Q2M389 1173 aa16.96■□□□□ 0.31
MSRA-201ENST00000317173 ZGPATQ8N5A5 531 aaKnown RBP16.96■□□□□ 0.31
MSRA-201ENST00000317173 CD209Q9NNX6 404 aa16.96■□□□□ 0.31
MSRA-201ENST00000317173 HELLSQ9NRZ9 838 aa16.96■□□□□ 0.31
MSRA-201ENST00000317173 SALL1Q9NSC2 1324 aa16.96■□□□□ 0.31
MSRA-201ENST00000317173 APLP1P51693 650 aa16.96■□□□□ 0.3
MSRA-201ENST00000317173 NMIQ13287 307 aaPredicted RBP16.96■□□□□ 0.3
MSRA-201ENST00000317173 WDR66Q8TBY9 1149 aa16.96■□□□□ 0.3
MSRA-201ENST00000317173 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.3
MSRA-201ENST00000317173 PIH1D3Q9NQM4 214 aaKnown RBP16.96■□□□□ 0.3
MSRA-201ENST00000317173 GJA3Q9Y6H8 435 aa16.96■□□□□ 0.3
MSRA-201ENST00000317173 LMOD1P29536 600 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms