RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 VPS37DQ86XT2 251 aa21.23■□□□□ 0.99
PUF60-201ENST00000313352 EXOC6BQ9Y2D4 811 aa21.23■□□□□ 0.99
PUF60-201ENST00000313352 PCDHAC2Q9Y5I4 1007 aa21.23■□□□□ 0.99
PUF60-201ENST00000313352 F8W031 263 aaPredicted RBP21.22■□□□□ 0.99
PUF60-201ENST00000313352 PHKA1P46020 1223 aa21.22■□□□□ 0.99
PUF60-201ENST00000313352 CEP350Q5VT06 3117 aa21.22■□□□□ 0.99
PUF60-201ENST00000313352 COL1A1P02452 1464 aaPredicted RBP21.22■□□□□ 0.99
PUF60-201ENST00000313352 A0A1B0GUL7 405 aa21.22■□□□□ 0.99
PUF60-201ENST00000313352 ITGBL1O95965 494 aaPredicted RBP21.22■□□□□ 0.99
PUF60-201ENST00000313352 USP17L8P0C7I0 530 aa21.22■□□□□ 0.99
PUF60-201ENST00000313352 CHAF1AQ13111 956 aaPredicted RBP21.22■□□□□ 0.99
PUF60-201ENST00000313352 CAVIN4Q5BKX8 364 aa21.22■□□□□ 0.99
PUF60-201ENST00000313352 CRBNQ96SW2 442 aa21.22■□□□□ 0.99
PUF60-201ENST00000313352 SCAF8Q9UPN6 1271 aaKnown RBP21.22■□□□□ 0.99
PUF60-201ENST00000313352 ZNF609O15014 1411 aa21.22■□□□□ 0.99
PUF60-201ENST00000313352 ZNF280AP59817 542 aaPredicted RBP21.21■□□□□ 0.99
PUF60-201ENST00000313352 CNTROBQ8N137 903 aa21.21■□□□□ 0.99
PUF60-201ENST00000313352 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
PUF60-201ENST00000313352 KIF4BQ2VIQ3 1234 aa21.2■□□□□ 0.98
PUF60-201ENST00000313352 FAM205AQ6ZU69 1335 aa21.2■□□□□ 0.98
PUF60-201ENST00000313352 HSPA6P17066 643 aa21.2■□□□□ 0.98
PUF60-201ENST00000313352 OS9Q13438 667 aaPredicted RBP21.2■□□□□ 0.98
PUF60-201ENST00000313352 XAGE2Q96GT9 111 aa21.2■□□□□ 0.98
PUF60-201ENST00000313352 NEUROD6Q96NK8 337 aa21.2■□□□□ 0.98
PUF60-201ENST00000313352 MYOZ2Q9NPC6 264 aa21.2■□□□□ 0.98
PUF60-201ENST00000313352 TRAF5O00463 557 aa21.19■□□□□ 0.98
PUF60-201ENST00000313352 MFSD14BQ5SR56 506 aa21.19■□□□□ 0.98
PUF60-201ENST00000313352 SUPT16HQ9Y5B9 1047 aaKnown RBP21.19■□□□□ 0.98
PUF60-201ENST00000313352 ARAP2Q8WZ64 1704 aa21.19■□□□□ 0.98
PUF60-201ENST00000313352 FRAT2O75474 233 aaPredicted RBP21.18■□□□□ 0.98
PUF60-201ENST00000313352 NBPF9Q3BBW0 867 aa21.18■□□□□ 0.98
PUF60-201ENST00000313352 CCDC102BQ68D86 513 aa21.18■□□□□ 0.98
PUF60-201ENST00000313352 RPAP2Q8IXW5 612 aaPredicted RBP21.18■□□□□ 0.98
PUF60-201ENST00000313352 GLIS2Q9BZE0 524 aaPredicted RBP21.18■□□□□ 0.98
PUF60-201ENST00000313352 AOX1Q06278 1338 aa21.18■□□□□ 0.98
PUF60-201ENST00000313352 PASKQ96RG2 1323 aa21.18■□□□□ 0.98
PUF60-201ENST00000313352 APBB1O00213 710 aa21.18■□□□□ 0.98
PUF60-201ENST00000313352 MYO3BQ8WXR4 1341 aa21.17■□□□□ 0.98
PUF60-201ENST00000313352 SCARF1Q14162 830 aa21.17■□□□□ 0.98
PUF60-201ENST00000313352 PGAP2Q9UHJ9 254 aa21.17■□□□□ 0.98
PUF60-201ENST00000313352 POLR2AP24928 1970 aaKnown RBP21.16■□□□□ 0.98
PUF60-201ENST00000313352 TNNI3KQ59H18 835 aa21.16■□□□□ 0.98
PUF60-201ENST00000313352 TLR7Q9NYK1 1049 aaKnown RBP21.16■□□□□ 0.98
PUF60-201ENST00000313352 AKAP2Q9Y2D5 859 aa21.16■□□□□ 0.98
PUF60-201ENST00000313352 PCDHB15Q9Y5E8 787 aa21.16■□□□□ 0.98
PUF60-201ENST00000313352 FPGT-TNNI3KV9GXZ4 949 aa21.16■□□□□ 0.98
PUF60-201ENST00000313352 BCL11AQ9H165 835 aa21.15■□□□□ 0.98
PUF60-201ENST00000313352 WNT10BO00744 389 aa21.15■□□□□ 0.98
PUF60-201ENST00000313352 EAF2Q96CJ1 260 aaPredicted RBP21.15■□□□□ 0.98
PUF60-201ENST00000313352 DBNDD2Q9BQY9 259 aa21.15■□□□□ 0.98
PUF60-201ENST00000313352 IL1RAPL2Q9NP60 686 aa21.15■□□□□ 0.98
PUF60-201ENST00000313352 GGA3Q9NZ52 723 aa21.15■□□□□ 0.98
PUF60-201ENST00000313352 MYH13Q9UKX3 1938 aa21.14■□□□□ 0.98
PUF60-201ENST00000313352 ANGEL2Q5VTE6 544 aaKnown RBP21.14■□□□□ 0.97
PUF60-201ENST00000313352 PI16Q6UXB8 463 aa21.14■□□□□ 0.97
PUF60-201ENST00000313352 OGFOD1Q8N543 542 aa21.14■□□□□ 0.97
PUF60-201ENST00000313352 CCDC8Q9H0W5 538 aaPredicted RBP21.14■□□□□ 0.97
PUF60-201ENST00000313352 ADM5C9JUS6 153 aa21.13■□□□□ 0.97
PUF60-201ENST00000313352 FKBP1AP62942 108 aaKnown RBP21.13■□□□□ 0.97
PUF60-201ENST00000313352 RASGRF1Q13972 1273 aa21.13■□□□□ 0.97
PUF60-201ENST00000313352 USP48Q86UV5 1035 aa21.13■□□□□ 0.97
PUF60-201ENST00000313352 TTF2Q9UNY4 1162 aaKnown RBP21.13■□□□□ 0.97
PUF60-201ENST00000313352 APLP1P51693 650 aa21.13■□□□□ 0.97
PUF60-201ENST00000313352 ZC3H15Q8WU90 426 aaKnown RBP21.13■□□□□ 0.97
PUF60-201ENST00000313352 ZBED3Q96IU2 234 aaPredicted RBP21.13■□□□□ 0.97
PUF60-201ENST00000313352 CHMP4BQ9H444 224 aaKnown RBP21.13■□□□□ 0.97
PUF60-201ENST00000313352 RHPN1Q8TCX5 695 aa21.12■□□□□ 0.97
PUF60-201ENST00000313352 DBNLQ9UJU6 430 aaKnown RBP21.12■□□□□ 0.97
PUF60-201ENST00000313352 IRX6P78412 446 aaPredicted RBP21.11■□□□□ 0.97
PUF60-201ENST00000313352 CFAP100Q494V2 611 aa21.11■□□□□ 0.97
PUF60-201ENST00000313352 PRMT6Q96LA8 375 aaPredicted RBP21.11■□□□□ 0.97
PUF60-201ENST00000313352 HMMRO75330 724 aa21.11■□□□□ 0.97
PUF60-201ENST00000313352 PRDX5P30044 214 aa21.11■□□□□ 0.97
PUF60-201ENST00000313352 CST9Q5W186 159 aa21.11■□□□□ 0.97
PUF60-201ENST00000313352 GPR108Q9NPR9 543 aa21.11■□□□□ 0.97
PUF60-201ENST00000313352 HDAC9Q9UKV0 1011 aa21.11■□□□□ 0.97
PUF60-201ENST00000313352 PRAMEF18Q5VWM3 479 aa21.1■□□□□ 0.97
PUF60-201ENST00000313352 KRT26Q7Z3Y9 468 aa21.1■□□□□ 0.97
PUF60-201ENST00000313352 EXOC6Q8TAG9 804 aa21.1■□□□□ 0.97
PUF60-201ENST00000313352 MCAMP43121 646 aa21.09■□□□□ 0.97
PUF60-201ENST00000313352 GORABQ5T7V8 394 aa21.09■□□□□ 0.97
PUF60-201ENST00000313352 DCPSQ96C86 337 aaKnown RBP21.09■□□□□ 0.97
PUF60-201ENST00000313352 GNL3LQ9NVN8 582 aaKnown RBP21.09■□□□□ 0.97
PUF60-201ENST00000313352 HMG20BQ9P0W2 317 aa21.09■□□□□ 0.97
PUF60-201ENST00000313352 RBM5P52756 815 aaKnown RBP eCLIP21.08■□□□□ 0.97
PUF60-201ENST00000313352 DLGAP5Q15398 846 aa21.08■□□□□ 0.97
PUF60-201ENST00000313352 CDC37L1Q7L3B6 337 aa21.08■□□□□ 0.97
PUF60-201ENST00000313352 DENND2AQ9ULE3 1009 aa21.08■□□□□ 0.97
PUF60-201ENST00000313352 CLRN2A0PK11 232 aa21.08■□□□□ 0.96
PUF60-201ENST00000313352 SMARCA5O60264 1052 aaPredicted RBP21.08■□□□□ 0.96
PUF60-201ENST00000313352 TBC1D9Q6ZT07 1266 aa21.08■□□□□ 0.96
PUF60-201ENST00000313352 AACSQ86V21 672 aa21.08■□□□□ 0.96
PUF60-201ENST00000313352 TBC1D22AQ8WUA7 517 aa21.08■□□□□ 0.96
PUF60-201ENST00000313352 ZNF408Q9H9D4 720 aa21.08■□□□□ 0.96
PUF60-201ENST00000313352 SNRKQ9NRH2 765 aa21.08■□□□□ 0.96
PUF60-201ENST00000313352 PCNTO95613 3336 aa21.07■□□□□ 0.96
PUF60-201ENST00000313352 SPDYE2BA6NHP3 402 aa21.07■□□□□ 0.96
PUF60-201ENST00000313352 SPDYE6P0CI01 402 aa21.07■□□□□ 0.96
PUF60-201ENST00000313352 ARID4AP29374 1257 aaPredicted RBP21.07■□□□□ 0.96
PUF60-201ENST00000313352 CRKP46108 304 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms