RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CADPS2Q86UW7 1296 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 IQUBQ8NA54 791 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 MBIPQ9NS73 344 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 DNAI1Q9UI46 699 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 METAP2P50579 478 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL6A5-202ENST00000312481 TMEM132EQ6IEE7 984 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 USP26Q9BXU7 913 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 PARP2Q9UGN5 583 aa10.01□□□□□ -0.81
COL6A5-202ENST00000312481 DIP2AQ14689 1571 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 ALDH3A1P30838 453 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 PLCD1P51178 756 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 IRX4P78413 519 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 SLFNL1Q499Z3 407 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 FAM81BQ96LP2 452 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 RPL13P26373 211 aaKnown RBP10□□□□□ -0.81
COL6A5-202ENST00000312481 SLC17A8Q8NDX2 589 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 RHPN1Q8TCX5 695 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 ZNF189O75820 626 aaPredicted RBP10□□□□□ -0.81
COL6A5-202ENST00000312481 PODNQ7Z5L7 613 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 MYL5Q02045 173 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 PPP2R3AQ06190 1150 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 DDX46Q7L014 1031 aaKnown RBP10□□□□□ -0.81
COL6A5-202ENST00000312481 ZC3H15Q8WU90 426 aaKnown RBP10□□□□□ -0.81
COL6A5-202ENST00000312481 P3H4Q92791 437 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 CUL5Q93034 780 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 BCAP29Q9UHQ4 241 aa10□□□□□ -0.81
COL6A5-202ENST00000312481 NUTM2FA1L443 756 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 NUTM2GQ5VZR2 741 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 C16orf45Q96MC5 204 aaPredicted RBP9.99□□□□□ -0.81
COL6A5-202ENST00000312481 MTRF1LQ9UGC7 380 aaKnown RBP9.99□□□□□ -0.81
COL6A5-202ENST00000312481 SETSIPP0DME0 302 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 ATP2A2P16615 1042 aaKnown RBP9.99□□□□□ -0.81
COL6A5-202ENST00000312481 APBB1IPQ7Z5R6 666 aaPredicted RBP9.99□□□□□ -0.81
COL6A5-202ENST00000312481 CUEDC2Q9H467 287 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 A0A1W2PP64 1363 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 PLEKHM2Q8IWE5 1019 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 SYCE1Q8N0S2 351 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 TMEM87AQ8NBN3 555 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 ANKARQ7Z5J8 1434 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 ARHGAP24Q8N264 748 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 MTA3Q9BTC8 594 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 LCMT1Q9UIC8 334 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 ARHGEF28Q8N1W1 1705 aaKnown RBP9.99□□□□□ -0.81
COL6A5-202ENST00000312481 SPTLC2O15270 562 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 EXOC1Q9NV70 894 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 MYO5BQ9ULV0 1848 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 PSDA5PKW4 1024 aaPredicted RBP9.99□□□□□ -0.81
COL6A5-202ENST00000312481 RCAN1P53805 252 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 SNX16P57768 344 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 PPP1R42Q7Z4L9 355 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 IFNL2Q8IZJ0 200 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 LRP2BPQ9P2M1 347 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 DMRT2Q9Y5R5 561 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 URI1O94763 535 aaPredicted RBP9.99□□□□□ -0.81
COL6A5-202ENST00000312481 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 CCDC26Q8TAB7 109 aa9.99□□□□□ -0.81
COL6A5-202ENST00000312481 SSFA2P28290 1259 aa9.98□□□□□ -0.81
COL6A5-202ENST00000312481 PRPF40BQ6NWY9 871 aaKnown RBP9.98□□□□□ -0.81
COL6A5-202ENST00000312481 ZBTB43O43298 467 aa9.98□□□□□ -0.81
COL6A5-202ENST00000312481 ZNF713Q8N859 430 aaPredicted RBP9.98□□□□□ -0.81
COL6A5-202ENST00000312481 KRI1Q8N9T8 703 aaKnown RBP9.98□□□□□ -0.81
COL6A5-202ENST00000312481 ACTN4O43707 911 aaKnown RBP9.98□□□□□ -0.81
COL6A5-202ENST00000312481 MAIP1Q8WWC4 291 aa9.98□□□□□ -0.81
COL6A5-202ENST00000312481 CTNNBL1Q8WYA6 563 aaPredicted RBP9.98□□□□□ -0.81
COL6A5-202ENST00000312481 WDR19Q8NEZ3 1342 aa9.98□□□□□ -0.81
COL6A5-202ENST00000312481 MROH1Q8NDA8 1641 aa9.98□□□□□ -0.81
COL6A5-202ENST00000312481 FMN2Q9NZ56 1722 aa9.98□□□□□ -0.81
COL6A5-202ENST00000312481 TRIM75PA6NK02 468 aa9.98□□□□□ -0.81
COL6A5-202ENST00000312481 LAD1O00515 517 aa9.98□□□□□ -0.81
COL6A5-202ENST00000312481 CUTAO60888 179 aa9.98□□□□□ -0.81
COL6A5-202ENST00000312481 CRNKL1Q9BZJ0 848 aaKnown RBP9.98□□□□□ -0.81
COL6A5-202ENST00000312481 LOXHD1Q8IVV2 1947 aa9.98□□□□□ -0.81
COL6A5-202ENST00000312481 A0A1B0GUL7 405 aa9.98□□□□□ -0.81
COL6A5-202ENST00000312481 RSRC1Q96IZ7 334 aaKnown RBP9.98□□□□□ -0.81
COL6A5-202ENST00000312481 TMOD2Q9NZR1 351 aa9.98□□□□□ -0.81
COL6A5-202ENST00000312481 CEP85Q6P2H3 762 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 CCDC129Q6ZRS4 1044 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 SUDS3Q9H7L9 328 aaPredicted RBP9.97□□□□□ -0.81
COL6A5-202ENST00000312481 ZNF521Q96K83 1311 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 AFDNP55196 1824 aaKnown RBP9.97□□□□□ -0.81
COL6A5-202ENST00000312481 CCDC14Q49A88 953 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 C10orf76Q5T2E6 689 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 CYP26C1Q6V0L0 522 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 MYH2Q9UKX2 1941 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 ORC2Q13416 577 aaPredicted RBP9.97□□□□□ -0.81
COL6A5-202ENST00000312481 METTL24Q5JXM2 366 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 EXOC6BQ9Y2D4 811 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 SOS2Q07890 1332 aaPredicted RBP9.97□□□□□ -0.81
COL6A5-202ENST00000312481 SYT1P21579 422 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 KIAA0753Q2KHM9 967 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 TAOK1Q7L7X3 1001 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 IFT20Q8IY31 132 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 FAM76AQ8TAV0 307 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 GNG11P61952 73 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 CFAP157Q5JU67 520 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 GOLGA4Q13439 2230 aaKnown RBP9.97□□□□□ -0.81
COL6A5-202ENST00000312481 NEFHP12036 1026 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 LMNB2Q03252 620 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 FOXD4L6Q3SYB3 417 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms