RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 BIN1O00499 593 aa12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 CSRNP2Q9H175 543 aa12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 NDC80O14777 642 aa12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 XAGE3Q8WTP9 111 aa12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 ARHGEF10LQ9HCE6 1279 aa12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 TMOD4Q9NZQ9 345 aa12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 TXNDC16Q9P2K2 825 aa12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 IVLP07476 585 aa12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 HSPA4P34932 840 aa12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 NEK11Q8NG66 645 aa12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 ZC3H12CQ9C0D7 883 aaKnown RBP12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 SMC6Q96SB8 1091 aa12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 ANAPC4Q9UJX5 808 aa12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 ARID4AP29374 1257 aaPredicted RBP12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 FAM200AQ8TCP9 573 aa12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 C8orf37Q96NL8 207 aa12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 PARP1P09874 1014 aaKnown RBP12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 ARL1P40616 181 aaPredicted RBP12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 MAK16Q9BXY0 300 aaKnown RBP12.79□□□□□ -0.36
VCPIP1-201ENST00000310421 SLC9C2Q5TAH2 1124 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 ARFGAP3Q9NP61 516 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 CPLX3Q8WVH0 158 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 SIRT1Q96EB6 747 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 POLR3AO14802 1390 aaPredicted RBP12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 DYNC1I1O14576 645 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 TBC1D32Q96NH3 1257 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 GNG11P61952 73 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 RBM26Q5T8P6 1007 aaKnown RBP12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 LZTS2Q9BRK4 669 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 VEZTQ9HBM0 779 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 DKC1O60832 514 aaKnown RBP eCLIP12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 CNGA1P29973 690 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 ATP5DP30049 168 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 MPNDQ8N594 471 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 CNBD1Q8NA66 436 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 FBXO31Q5XUX0 539 aaPredicted RBP12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 CCDC50Q8IVM0 306 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 TCHPQ9BT92 498 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 HAUS3Q68CZ6 603 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 PSMD1Q99460 953 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 C19orf44Q9H6X5 657 aa12.78□□□□□ -0.36
VCPIP1-201ENST00000310421 TRAPPC8Q9Y2L5 1435 aa12.77□□□□□ -0.36
VCPIP1-201ENST00000310421 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.36
VCPIP1-201ENST00000310421 STK10O94804 968 aaKnown RBP12.77□□□□□ -0.36
VCPIP1-201ENST00000310421 KIF5AQ12840 1032 aa12.77□□□□□ -0.36
VCPIP1-201ENST00000310421 VWA3BQ502W6 1294 aa12.77□□□□□ -0.36
VCPIP1-201ENST00000310421 EEF2P13639 858 aaKnown RBP12.77□□□□□ -0.36
VCPIP1-201ENST00000310421 LINS1Q8NG48 757 aa12.77□□□□□ -0.36
VCPIP1-201ENST00000310421 SNRKQ9NRH2 765 aa12.77□□□□□ -0.36
VCPIP1-201ENST00000310421 MAP7D1Q3KQU3 841 aa12.77□□□□□ -0.36
VCPIP1-201ENST00000310421 GOLGA1Q92805 767 aa12.77□□□□□ -0.36
VCPIP1-201ENST00000310421 LRRC59Q96AG4 307 aaKnown RBP12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 PKNOX2Q96KN3 472 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 TBC1D2Q9BYX2 928 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 DENND2AQ9ULE3 1009 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 NUP153P49790 1475 aaKnown RBP12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 CTAGE15A4D2H0 777 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 CTAGE8P0CG41 777 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 CTAGE6Q86UF2 777 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 DZIP3Q86Y13 1208 aaKnown RBP12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 CTAGE4Q8IX94 777 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 BABAM1Q9NWV8 329 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 PICALMQ13492 652 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 CNGA4Q8IV77 575 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 MTRF1LQ9UGC7 380 aaKnown RBP12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 BMS1Q14692 1282 aaKnown RBP12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 WDR44Q5JSH3 913 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 MCM9Q9NXL9 1143 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 ATP6V0A2Q9Y487 856 aa12.77□□□□□ -0.37
VCPIP1-201ENST00000310421 IBTKQ9P2D0 1353 aaPredicted RBP12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 PARP10Q53GL7 1025 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 TTC6Q86TZ1 520 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 ZNF608Q9ULD9 1512 aaPredicted RBP12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 SSFA2P28290 1259 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 AOX1Q06278 1338 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 GMNNO75496 209 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 GPR161Q8N6U8 529 aaKnown RBP12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 TFCP2L1Q9NZI6 479 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 EXOC7Q9UPT5 735 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 LMTK3Q96Q04 1460 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 ZWINTO95229 277 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 TCOF1Q13428 1488 aaKnown RBP12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 TRIM14Q14142 442 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 IQUBQ8NA54 791 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 EPB41P11171 864 aaKnown RBP12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 Q6ZUG5 572 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 MTUS1Q9ULD2 1270 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 SPTLC2O15270 562 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 PLCD1P51178 756 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 MAGEB6Q8N7X4 407 aa12.76□□□□□ -0.37
VCPIP1-201ENST00000310421 MKRN1Q9UHC7 482 aaKnown RBP12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 FAM184BQ9ULE4 1060 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 PDE1AP54750 535 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 ANKRD44Q8N8A2 993 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 BRF1Q92994 677 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 KCNG1Q9UIX4 513 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms