RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 PPIP5K2O43314 1243 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 SMARCA5O60264 1052 aaPredicted RBP9.37□□□□□ -0.91
VPS41-202ENST00000310301 IDH1O75874 414 aaKnown RBP9.37□□□□□ -0.91
VPS41-202ENST00000310301 ZBTB7AO95365 584 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 ZNF165P49910 485 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 GUCY1B3Q02153 619 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 C6orf163Q5TEZ5 329 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 PI4KAP1Q8N8J0 262 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 FSIP1Q8NA03 581 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 PLBD2Q8NHP8 589 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 PIBF1Q8WXW3 757 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 SH2B1Q9NRF2 756 aaPredicted RBP9.37□□□□□ -0.91
VPS41-202ENST00000310301 SPATA31A5Q5VU36 1347 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 SPATA31A7Q8IWB4 1347 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 RAB11FIP3O75154 756 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 IL13P35225 146 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 FBF1Q8TES7 1133 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.37□□□□□ -0.91
VPS41-202ENST00000310301 RASSF4Q9H2L5 321 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.37□□□□□ -0.91
VPS41-202ENST00000310301 V9GYY5 206 aaPredicted RBP9.37□□□□□ -0.91
VPS41-202ENST00000310301 CTNNBL1Q8WYA6 563 aaPredicted RBP9.37□□□□□ -0.91
VPS41-202ENST00000310301 JADE2Q9NQC1 790 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 CHPF2Q9P2E5 772 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 ZKSCAN5Q9Y2L8 839 aa9.37□□□□□ -0.91
VPS41-202ENST00000310301 IL6STP40189 918 aaPredicted RBP9.36□□□□□ -0.91
VPS41-202ENST00000310301 CCDC6Q16204 474 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 WDR78Q5VTH9 848 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 TDRD12Q587J7 1177 aaKnown RBP9.36□□□□□ -0.91
VPS41-202ENST00000310301 LINS1Q8NG48 757 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 UBAC1Q9BSL1 405 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 MPHOSPH10O00566 681 aaKnown RBP9.36□□□□□ -0.91
VPS41-202ENST00000310301 CLGNO14967 610 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 CCDC93Q567U6 631 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 CNNM3Q8NE01 707 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 RNF216Q9NWF9 866 aaPredicted RBP9.36□□□□□ -0.91
VPS41-202ENST00000310301 BCORL1Q5H9F3 1711 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 OTUD7BQ6GQQ9 843 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 VPS36Q86VN1 386 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 TAOK3Q9H2K8 898 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 SERPINA10Q9UK55 444 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 CEP152O94986 1710 aa9.36□□□□□ -0.91
VPS41-202ENST00000310301 FRMPD1Q5SYB0 1578 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 PNPLA6Q8IY17 1366 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 UFL1O94874 794 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 GIMAP6Q6P9H5 292 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 RTKN2Q8IZC4 609 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 ZNF408Q9H9D4 720 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 VEZTQ9HBM0 779 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 OGFRQ9NZT2 677 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 TFIP11Q9UBB9 837 aaKnown RBP9.35□□□□□ -0.91
VPS41-202ENST00000310301 CCDC160A6NGH7 325 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 RPS6KA4O75676 772 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 CRKLP46109 303 aaKnown RBP9.35□□□□□ -0.91
VPS41-202ENST00000310301 UBE2HP62256 183 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 TTLL6Q8N841 843 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 ATRIPQ8WXE1 791 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 TSG101Q99816 390 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 LARP6Q9BRS8 491 aaKnown RBP9.35□□□□□ -0.91
VPS41-202ENST00000310301 DNAI1Q9UI46 699 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 LIMCH1Q9UPQ0 1083 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 EXOC6BQ9Y2D4 811 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 ADAMTS13Q76LX8 1427 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 MX1P20591 662 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 CARD14Q9BXL6 1004 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 VPS18Q9P253 973 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 TMCO5BA8MYB1 307 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 PDE8AO60658 829 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 SLU7O95391 586 aaKnown RBP9.35□□□□□ -0.91
VPS41-202ENST00000310301 SERPINB2P05120 415 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 SKILP12757 684 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 GJB2P29033 226 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 TNFAIP1Q13829 316 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 DAAM2Q86T65 1068 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 KIF1BPQ96EK5 621 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 C8orf76Q96K31 380 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 SCLT1Q96NL6 688 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 MBIPQ9NS73 344 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 GBP6Q6ZN66 633 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 CCDC186Q7Z3E2 898 aa9.35□□□□□ -0.91
VPS41-202ENST00000310301 DCPSQ96C86 337 aaKnown RBP9.35□□□□□ -0.91
VPS41-202ENST00000310301 RIMBP2O15034 1052 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 STX6O43752 255 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 POTEJP0CG39 1038 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 DESP17661 470 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 ANAPC15P60006 121 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 ISM2Q6H9L7 571 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 OTUD6BQ8N6M0 293 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 PIK3C2BO00750 1634 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 USPL1Q5W0Q7 1092 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 CCDC121Q6ZUS5 278 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 MKNK2Q9HBH9 465 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 KDM2BQ8NHM5 1336 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 CTAGE15A4D2H0 777 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 PPP1R12BO60237 982 aaPredicted RBP9.34□□□□□ -0.91
VPS41-202ENST00000310301 NEBLO76041 1014 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 MMP10P09238 476 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 CTAGE8P0CG41 777 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 CTAGE6Q86UF2 777 aa9.34□□□□□ -0.91
VPS41-202ENST00000310301 HOOK3Q86VS8 718 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms