RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 C6orf229H3BNL8 230 aa18.38■□□□□ 0.53
CGGBP1-201ENST00000309534 HSPD1P10809 573 aaKnown RBP18.38■□□□□ 0.53
CGGBP1-201ENST00000309534 PDE6AP16499 860 aa18.38■□□□□ 0.53
CGGBP1-201ENST00000309534 SERPINB2P05120 415 aa18.38■□□□□ 0.53
CGGBP1-201ENST00000309534 ARID4AP29374 1257 aaPredicted RBP18.38■□□□□ 0.53
CGGBP1-201ENST00000309534 CERS3Q8IU89 383 aa18.38■□□□□ 0.53
CGGBP1-201ENST00000309534 ZNF287Q9HBT7 754 aa18.38■□□□□ 0.53
CGGBP1-201ENST00000309534 STX6O43752 255 aa18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 GJB2P29033 226 aa18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 WDR66Q8TBY9 1149 aa18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 UBR2Q8IWV8 1755 aa18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 MAST3O60307 1309 aa18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 BAG4O95429 457 aaKnown RBP18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 MFSD6Q6ZSS7 791 aa18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 ADD2P35612 726 aa18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 ZNF589Q86UQ0 364 aaPredicted RBP18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 RASEFQ8IZ41 740 aa18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 BRF1Q92994 677 aa18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 CUL4AQ13619 759 aa18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 GGA1Q9UJY5 639 aa18.37■□□□□ 0.53
CGGBP1-201ENST00000309534 PAPPAQ13219 1627 aa18.36■□□□□ 0.53
CGGBP1-201ENST00000309534 MBD4O95243 580 aa18.36■□□□□ 0.53
CGGBP1-201ENST00000309534 ATP2B4P23634 1241 aa18.36■□□□□ 0.53
CGGBP1-201ENST00000309534 HAND2P61296 217 aa18.36■□□□□ 0.53
CGGBP1-201ENST00000309534 MED23Q9ULK4 1368 aa18.36■□□□□ 0.53
CGGBP1-201ENST00000309534 IGSF3O75054 1194 aa18.36■□□□□ 0.53
CGGBP1-201ENST00000309534 KRT85P78386 507 aa18.36■□□□□ 0.53
CGGBP1-201ENST00000309534 GRAPQ13588 217 aa18.36■□□□□ 0.53
CGGBP1-201ENST00000309534 TXNRD1Q16881 649 aa18.36■□□□□ 0.53
CGGBP1-201ENST00000309534 GRAPLQ8TC17 118 aaPredicted RBP18.36■□□□□ 0.53
CGGBP1-201ENST00000309534 IQSEC3Q9UPP2 1182 aaPredicted RBP18.36■□□□□ 0.53
CGGBP1-201ENST00000309534 SEC62Q99442 399 aaKnown RBP18.36■□□□□ 0.53
CGGBP1-201ENST00000309534 ATRNO75882 1429 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 PRPF40AO75400 957 aaKnown RBP18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 MCAMP43121 646 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 BCAMP50895 628 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 SAFBQ15424 915 aaKnown RBP eCLIP18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 ZNF396Q96N95 335 aaPredicted RBP18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 NSFL1CQ9UNZ2 370 aaKnown RBP18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 BBOX1O75936 387 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 PDE6BP35913 854 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 TMTC2Q8N394 836 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 XDHP47989 1333 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 XBP1P17861 261 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 TSGA10IPQ3SY00 556 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 WASF1Q92558 559 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 ZNF804BA4D1E1 1349 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 CCDC196A0A1B0GTZ2 297 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 ALDH1B1P30837 517 aa18.35■□□□□ 0.53
CGGBP1-201ENST00000309534 ITGB4P16144 1822 aa18.34■□□□□ 0.53
CGGBP1-201ENST00000309534 CD2BP2O95400 341 aaKnown RBP18.34■□□□□ 0.53
CGGBP1-201ENST00000309534 FOXD4L6Q3SYB3 417 aaPredicted RBP18.34■□□□□ 0.53
CGGBP1-201ENST00000309534 FOXD4L3Q6VB84 417 aaPredicted RBP18.34■□□□□ 0.53
CGGBP1-201ENST00000309534 TRIM22Q8IYM9 498 aa18.34■□□□□ 0.53
CGGBP1-201ENST00000309534 EYA3Q99504 573 aa18.34■□□□□ 0.53
CGGBP1-201ENST00000309534 USP5P45974 858 aa18.34■□□□□ 0.53
CGGBP1-201ENST00000309534 TPRNQ4KMQ1 711 aa18.34■□□□□ 0.53
CGGBP1-201ENST00000309534 ONECUT3O60422 494 aaPredicted RBP18.34■□□□□ 0.53
CGGBP1-201ENST00000309534 SF3A1Q15459 793 aaKnown RBP18.34■□□□□ 0.53
CGGBP1-201ENST00000309534 LLPHQ9BRT6 129 aaKnown RBP18.34■□□□□ 0.53
CGGBP1-201ENST00000309534 RPAP1Q9BWH6 1393 aaPredicted RBP18.34■□□□□ 0.53
CGGBP1-201ENST00000309534 MINDY4BA8MYZ0 360 aa18.33■□□□□ 0.53
CGGBP1-201ENST00000309534 PATL2C9JE40 543 aaKnown RBP18.33■□□□□ 0.53
CGGBP1-201ENST00000309534 PRC1O43663 620 aa18.33■□□□□ 0.53
CGGBP1-201ENST00000309534 ZSCAN22P10073 491 aaPredicted RBP18.33■□□□□ 0.53
CGGBP1-201ENST00000309534 MINPP1Q9UNW1 487 aa18.33■□□□□ 0.53
CGGBP1-201ENST00000309534 NRAPQ86VF7 1730 aa18.33■□□□□ 0.52
CGGBP1-201ENST00000309534 LDHBP07195 334 aaKnown RBP18.33■□□□□ 0.52
CGGBP1-201ENST00000309534 NFIXQ14938 502 aa18.33■□□□□ 0.52
CGGBP1-201ENST00000309534 IQCA1Q86XH1 822 aa18.33■□□□□ 0.52
CGGBP1-201ENST00000309534 UFL1O94874 794 aa18.33■□□□□ 0.52
CGGBP1-201ENST00000309534 PLCG2P16885 1265 aa18.33■□□□□ 0.52
CGGBP1-201ENST00000309534 GOLGA8BA8MQT2 603 aa18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 E7EWF7 191 aa18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 LETM1O95202 739 aaPredicted RBP18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 IFIT3O14879 490 aaKnown RBP18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 TMEM87BQ96K49 555 aa18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 TAOK2Q9UL54 1235 aa18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 CPA1P15085 419 aa18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 BAG6P46379 1132 aa18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 GYG1P46976 350 aa18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 ESR2Q92731 530 aa18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 OSBP2Q969R2 916 aa18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 TRIM44Q96DX7 344 aaPredicted RBP18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 LARP6Q9BRS8 491 aaKnown RBP18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 ALDH8A1Q9H2A2 487 aaPredicted RBP18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 CFAP45Q9UL16 551 aa18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 TOGARAM1Q9Y4F4 1720 aa18.32■□□□□ 0.52
CGGBP1-201ENST00000309534 RASGRF1Q13972 1273 aa18.31■□□□□ 0.52
CGGBP1-201ENST00000309534 CCDC24Q8N4L8 307 aa18.31■□□□□ 0.52
CGGBP1-201ENST00000309534 TCEANC2Q96MN5 208 aa18.31■□□□□ 0.52
CGGBP1-201ENST00000309534 M0R2C6 588 aa18.31■□□□□ 0.52
CGGBP1-201ENST00000309534 PDE4BQ07343 736 aa18.31■□□□□ 0.52
CGGBP1-201ENST00000309534 TMEM67Q5HYA8 995 aa18.31■□□□□ 0.52
CGGBP1-201ENST00000309534 ZNF622Q969S3 477 aaKnown RBP eCLIP18.31■□□□□ 0.52
CGGBP1-201ENST00000309534 AK9Q5TCS8 1911 aa18.31■□□□□ 0.52
CGGBP1-201ENST00000309534 KCNB2Q92953 911 aa18.31■□□□□ 0.52
CGGBP1-201ENST00000309534 ZC3H12CQ9C0D7 883 aaKnown RBP18.31■□□□□ 0.52
CGGBP1-201ENST00000309534 SLC12A7Q9Y666 1083 aa18.31■□□□□ 0.52
CGGBP1-201ENST00000309534 NECAB1Q8N987 351 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms