RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PRDM1O75626 825 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 ITGA6P23229 1130 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 LEO1Q8WVC0 666 aaPredicted RBP14.68□□□□□ -0.06
RETREG3-201ENST00000309428 AIDAQ96BJ3 306 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 C8orf76Q96K31 380 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 PAXBP1Q9Y5B6 917 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 PRC1O43663 620 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 LMAN1P49257 510 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 IMMTQ16891 758 aaKnown RBP14.68□□□□□ -0.06
RETREG3-201ENST00000309428 KBTBD3Q8NAB2 608 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 TRIM34Q9BYJ4 488 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 LRP2BPQ9P2M1 347 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 HSPD1P10809 573 aaKnown RBP14.68□□□□□ -0.06
RETREG3-201ENST00000309428 TDO2P48775 406 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 FAM193AP78312 1265 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 ERCC6LQ2NKX8 1250 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 ZSCAN25Q6NSZ9 544 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 ANO10Q9NW15 660 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 SLAIN2Q9P270 581 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 ZBTB1Q9Y2K1 713 aa14.68□□□□□ -0.06
RETREG3-201ENST00000309428 STARD3NLO95772 234 aa14.67□□□□□ -0.06
RETREG3-201ENST00000309428 ZNF710Q8N1W2 664 aa14.67□□□□□ -0.06
RETREG3-201ENST00000309428 USP28Q96RU2 1077 aa14.67□□□□□ -0.06
RETREG3-201ENST00000309428 PUS7LQ9H0K6 701 aaKnown RBP14.67□□□□□ -0.06
RETREG3-201ENST00000309428 E7EWF7 191 aa14.67□□□□□ -0.06
RETREG3-201ENST00000309428 IRS4O14654 1257 aaPredicted RBP14.67□□□□□ -0.06
RETREG3-201ENST00000309428 RAD21O60216 631 aa14.67□□□□□ -0.06
RETREG3-201ENST00000309428 ZSCAN20P17040 1043 aaPredicted RBP14.67□□□□□ -0.06
RETREG3-201ENST00000309428 ADD1P35611 737 aaKnown RBP14.67□□□□□ -0.06
RETREG3-201ENST00000309428 ZNF75DP51815 510 aa14.67□□□□□ -0.06
RETREG3-201ENST00000309428 HSP90B2PQ58FF3 399 aa14.67□□□□□ -0.06
RETREG3-201ENST00000309428 CACTINQ8WUQ7 758 aaKnown RBP14.67□□□□□ -0.06
RETREG3-201ENST00000309428 ZNF396Q96N95 335 aaPredicted RBP14.67□□□□□ -0.06
RETREG3-201ENST00000309428 BABAM1Q9NWV8 329 aa14.67□□□□□ -0.06
RETREG3-201ENST00000309428 UBE2Q2LH0YL09 131 aa14.67□□□□□ -0.06
RETREG3-201ENST00000309428 PHACTR2O75167 634 aa14.67□□□□□ -0.06
RETREG3-201ENST00000309428 SLU7O95391 586 aaKnown RBP14.67□□□□□ -0.06
RETREG3-201ENST00000309428 KLHL10Q6JEL2 608 aa14.67□□□□□ -0.06
RETREG3-201ENST00000309428 CCDC102AQ96A19 550 aa14.67□□□□□ -0.06
RETREG3-201ENST00000309428 TCHHQ07283 1943 aa14.66□□□□□ -0.06
RETREG3-201ENST00000309428 VIRMAQ69YN4 1812 aaKnown RBP14.66□□□□□ -0.06
RETREG3-201ENST00000309428 ATP5JP18859 108 aa14.66□□□□□ -0.06
RETREG3-201ENST00000309428 IL15P40933 162 aaPredicted RBP14.66□□□□□ -0.06
RETREG3-201ENST00000309428 CTDSPL2Q05D32 466 aa14.66□□□□□ -0.06
RETREG3-201ENST00000309428 KRT32Q14532 448 aa14.66□□□□□ -0.06
RETREG3-201ENST00000309428 OLFM4Q6UX06 510 aa14.66□□□□□ -0.06
RETREG3-201ENST00000309428 CERS3Q8IU89 383 aa14.66□□□□□ -0.06
RETREG3-201ENST00000309428 RAI14Q9P0K7 980 aa14.66□□□□□ -0.06
RETREG3-201ENST00000309428 IFNKQ9P0W0 207 aa14.66□□□□□ -0.06
RETREG3-201ENST00000309428 PRDM4Q9UKN5 801 aa14.66□□□□□ -0.06
RETREG3-201ENST00000309428 ANKRD26Q9UPS8 1709 aa14.66□□□□□ -0.06
RETREG3-201ENST00000309428 MCM6Q14566 821 aa14.66□□□□□ -0.06
RETREG3-201ENST00000309428 RNF113AO15541 343 aaKnown RBP14.65□□□□□ -0.06
RETREG3-201ENST00000309428 DHX32Q7L7V1 743 aaKnown RBP14.65□□□□□ -0.06
RETREG3-201ENST00000309428 SEC31BQ9NQW1 1179 aa14.65□□□□□ -0.06
RETREG3-201ENST00000309428 BRINP3Q76B58 766 aa14.65□□□□□ -0.06
RETREG3-201ENST00000309428 C10orf67Q8IYJ2 551 aa14.65□□□□□ -0.06
RETREG3-201ENST00000309428 FEZ1Q99689 392 aa14.65□□□□□ -0.06
RETREG3-201ENST00000309428 CALCOCO1Q9P1Z2 691 aa14.65□□□□□ -0.06
RETREG3-201ENST00000309428 AOX1Q06278 1338 aa14.65□□□□□ -0.06
RETREG3-201ENST00000309428 GPAA1O43292 621 aa14.65□□□□□ -0.06
RETREG3-201ENST00000309428 GNG11P61952 73 aa14.65□□□□□ -0.06
RETREG3-201ENST00000309428 STX1AQ16623 288 aa14.65□□□□□ -0.06
RETREG3-201ENST00000309428 ZNF397Q8NF99 534 aaPredicted RBP14.65□□□□□ -0.06
RETREG3-201ENST00000309428 COPRSQ9NQ92 184 aa14.65□□□□□ -0.06
RETREG3-201ENST00000309428 MAST3O60307 1309 aa14.65□□□□□ -0.06
RETREG3-201ENST00000309428 PHKA1P46020 1223 aa14.64□□□□□ -0.07
RETREG3-201ENST00000309428 PIGBQ92521 554 aa14.64□□□□□ -0.07
RETREG3-201ENST00000309428 ST7Q9NRC1 585 aa14.64□□□□□ -0.07
RETREG3-201ENST00000309428 FGAP02671 866 aa14.64□□□□□ -0.07
RETREG3-201ENST00000309428 TRIM29Q14134 588 aa14.64□□□□□ -0.07
RETREG3-201ENST00000309428 DZIP3Q86Y13 1208 aaKnown RBP14.64□□□□□ -0.07
RETREG3-201ENST00000309428 ARMT1Q9H993 441 aa14.64□□□□□ -0.07
RETREG3-201ENST00000309428 ADGRL3Q9HAR2 1447 aa14.64□□□□□ -0.07
RETREG3-201ENST00000309428 ANKRD18BA2A2Z9 1011 aa14.64□□□□□ -0.07
RETREG3-201ENST00000309428 BMS1Q14692 1282 aaKnown RBP14.64□□□□□ -0.07
RETREG3-201ENST00000309428 MAGEB6Q8N7X4 407 aa14.64□□□□□ -0.07
RETREG3-201ENST00000309428 SLC26A6Q9BXS9 759 aa14.64□□□□□ -0.07
RETREG3-201ENST00000309428 C3P01024 1663 aa14.64□□□□□ -0.07
RETREG3-201ENST00000309428 EXOC5O00471 708 aa14.63□□□□□ -0.07
RETREG3-201ENST00000309428 BAZ2BQ9UIF8 2168 aaKnown RBP14.63□□□□□ -0.07
RETREG3-201ENST00000309428 LEKR1Q6ZMV7 388 aa14.63□□□□□ -0.07
RETREG3-201ENST00000309428 NEK11Q8NG66 645 aa14.63□□□□□ -0.07
RETREG3-201ENST00000309428 NAPBQ9H115 298 aa14.63□□□□□ -0.07
RETREG3-201ENST00000309428 IFIT3O14879 490 aaKnown RBP14.63□□□□□ -0.07
RETREG3-201ENST00000309428 AP5Z1O43299 807 aa14.63□□□□□ -0.07
RETREG3-201ENST00000309428 ATP6V1AP38606 617 aa14.63□□□□□ -0.07
RETREG3-201ENST00000309428 NCBP1Q09161 790 aaKnown RBP14.63□□□□□ -0.07
RETREG3-201ENST00000309428 UBR1Q8IWV7 1749 aa14.63□□□□□ -0.07
RETREG3-201ENST00000309428 WTIPA6NIX2 430 aaPredicted RBP14.62□□□□□ -0.07
RETREG3-201ENST00000309428 HAUS7Q99871 368 aa14.62□□□□□ -0.07
RETREG3-201ENST00000309428 MRVI1Q9Y6F6 885 aa14.62□□□□□ -0.07
RETREG3-201ENST00000309428 MEGF6O75095 1541 aa14.62□□□□□ -0.07
RETREG3-201ENST00000309428 PRKAB2O43741 272 aa14.62□□□□□ -0.07
RETREG3-201ENST00000309428 SLC3A2P08195 630 aaKnown RBP14.62□□□□□ -0.07
RETREG3-201ENST00000309428 MTX1Q13505 466 aa14.62□□□□□ -0.07
RETREG3-201ENST00000309428 PGBD1Q96JS3 809 aa14.62□□□□□ -0.07
RETREG3-201ENST00000309428 TAF3Q5VWG9 929 aa14.62□□□□□ -0.07
RETREG3-201ENST00000309428 KCNF1Q9H3M0 494 aa14.62□□□□□ -0.07
RETREG3-201ENST00000309428 TOP1P11387 765 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms