RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 MROH5Q6ZUA9 1318 aa10.11□□□□□ -0.79
CHD6-201ENST00000309279 PRELPP51888 382 aa10.11□□□□□ -0.79
CHD6-201ENST00000309279 LRRC24Q50LG9 513 aa10.11□□□□□ -0.79
CHD6-201ENST00000309279 VGLL2Q8N8G2 317 aa10.11□□□□□ -0.79
CHD6-201ENST00000309279 SUPT20HQ8NEM7 779 aa10.11□□□□□ -0.79
CHD6-201ENST00000309279 TBC1D16Q8TBP0 767 aa10.11□□□□□ -0.79
CHD6-201ENST00000309279 CNNM1Q9NRU3 951 aa10.11□□□□□ -0.79
CHD6-201ENST00000309279 ANKIB1Q9P2G1 1089 aa10.11□□□□□ -0.79
CHD6-201ENST00000309279 POLLQ9UGP5 575 aa10.11□□□□□ -0.79
CHD6-201ENST00000309279 PA2G4Q9UQ80 394 aaKnown RBP10.11□□□□□ -0.79
CHD6-201ENST00000309279 NOP58Q9Y2X3 529 aaKnown RBP10.11□□□□□ -0.79
CHD6-201ENST00000309279 LMNB1P20700 586 aa10.1□□□□□ -0.79
CHD6-201ENST00000309279 LEMD3Q9Y2U8 911 aa10.1□□□□□ -0.79
CHD6-201ENST00000309279 PCDHB15Q9Y5E8 787 aa10.1□□□□□ -0.79
CHD6-201ENST00000309279 HMMRO75330 724 aa10.09□□□□□ -0.79
CHD6-201ENST00000309279 PDE8BO95263 885 aa10.09□□□□□ -0.79
CHD6-201ENST00000309279 ATP2B4P23634 1241 aa10.09□□□□□ -0.79
CHD6-201ENST00000309279 IL15P40933 162 aaPredicted RBP10.09□□□□□ -0.79
CHD6-201ENST00000309279 RASSF7Q02833 373 aa10.09□□□□□ -0.79
CHD6-201ENST00000309279 EXOC6Q8TAG9 804 aa10.09□□□□□ -0.79
CHD6-201ENST00000309279 UBA5Q9GZZ9 404 aa10.09□□□□□ -0.79
CHD6-201ENST00000309279 GGA1Q9UJY5 639 aa10.09□□□□□ -0.79
CHD6-201ENST00000309279 WTIPA6NIX2 430 aaPredicted RBP10.08□□□□□ -0.8
CHD6-201ENST00000309279 SEMA3EO15041 775 aa10.08□□□□□ -0.8
CHD6-201ENST00000309279 PPFIA4O75335 1185 aa10.08□□□□□ -0.8
CHD6-201ENST00000309279 TAF5LO75529 589 aa10.08□□□□□ -0.8
CHD6-201ENST00000309279 KIAA2012Q0VF49 1180 aa10.08□□□□□ -0.8
CHD6-201ENST00000309279 UBE4AQ14139 1066 aa10.08□□□□□ -0.8
CHD6-201ENST00000309279 WASHC4Q2M389 1173 aa10.08□□□□□ -0.8
CHD6-201ENST00000309279 TSR1Q2NL82 804 aaKnown RBP10.08□□□□□ -0.8
CHD6-201ENST00000309279 GIMAP6Q6P9H5 292 aa10.08□□□□□ -0.8
CHD6-201ENST00000309279 SND1Q7KZF4 910 aaKnown RBP eCLIP10.08□□□□□ -0.8
CHD6-201ENST00000309279 HELBQ8NG08 1087 aaPredicted RBP10.08□□□□□ -0.8
CHD6-201ENST00000309279 MORC4Q8TE76 937 aa10.08□□□□□ -0.8
CHD6-201ENST00000309279 SIL1Q9H173 461 aa10.08□□□□□ -0.8
CHD6-201ENST00000309279 ZNF277Q9NRM2 450 aaPredicted RBP10.08□□□□□ -0.8
CHD6-201ENST00000309279 ZNF804BA4D1E1 1349 aa10.08□□□□□ -0.8
CHD6-201ENST00000309279 IRS2Q9Y4H2 1338 aa10.08□□□□□ -0.8
CHD6-201ENST00000309279 C6orf229H3BNL8 230 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 SURF6O75683 361 aaKnown RBP10.07□□□□□ -0.8
CHD6-201ENST00000309279 UFL1O94874 794 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 IARSP41252 1262 aaKnown RBP10.07□□□□□ -0.8
CHD6-201ENST00000309279 G3BP1Q13283 466 aaKnown RBP eCLIP10.07□□□□□ -0.8
CHD6-201ENST00000309279 METTL24Q5JXM2 366 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 TSHZ1Q6ZSZ6 1077 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 C15orf52Q6ZUT6 534 aaKnown RBP10.07□□□□□ -0.8
CHD6-201ENST00000309279 EYA3Q99504 573 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 MTA3Q9BTC8 594 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 RPS6KL1Q9Y6S9 549 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 MED23Q9ULK4 1368 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 SNAP23O00161 211 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 CLGNO14967 610 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 SASH1O94885 1247 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 FGFR2P21802 821 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 PDE4DQ08499 809 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 MYBPC2Q14324 1141 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 C9orf131Q5VYM1 1079 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 RINLQ6ZS11 566 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 ZC3H12CQ9C0D7 883 aaKnown RBP10.07□□□□□ -0.8
CHD6-201ENST00000309279 CEP126Q9P2H0 1117 aa10.07□□□□□ -0.8
CHD6-201ENST00000309279 COL4A5P29400 1685 aa10.06□□□□□ -0.8
CHD6-201ENST00000309279 PPIP5K2O43314 1243 aa10.06□□□□□ -0.8
CHD6-201ENST00000309279 FOXD4Q12950 439 aaPredicted RBP10.06□□□□□ -0.8
CHD6-201ENST00000309279 HDAC1Q13547 482 aaPredicted RBP10.06□□□□□ -0.8
CHD6-201ENST00000309279 PUM3Q15397 648 aaKnown RBP10.06□□□□□ -0.8
CHD6-201ENST00000309279 AOC3Q16853 763 aa10.06□□□□□ -0.8
CHD6-201ENST00000309279 TXNRD3Q86VQ6 643 aa10.06□□□□□ -0.8
CHD6-201ENST00000309279 MRRFQ96E11 262 aaKnown RBP10.06□□□□□ -0.8
CHD6-201ENST00000309279 DCTPP1Q9H773 170 aa10.06□□□□□ -0.8
CHD6-201ENST00000309279 PLSCR2Q9NRY7 297 aa10.06□□□□□ -0.8
CHD6-201ENST00000309279 RNF181Q9P0P0 153 aa10.06□□□□□ -0.8
CHD6-201ENST00000309279 FZD9O00144 591 aa10.05□□□□□ -0.8
CHD6-201ENST00000309279 PEX14O75381 377 aa10.05□□□□□ -0.8
CHD6-201ENST00000309279 MAP4K4O95819 1239 aaPredicted RBP10.05□□□□□ -0.8
CHD6-201ENST00000309279 TCF3P15923 654 aa10.05□□□□□ -0.8
CHD6-201ENST00000309279 KCNJ4P48050 445 aa10.05□□□□□ -0.8
CHD6-201ENST00000309279 TFCP2Q12800 502 aa10.05□□□□□ -0.8
CHD6-201ENST00000309279 LONRF3Q496Y0 759 aa10.05□□□□□ -0.8
CHD6-201ENST00000309279 LARGE2Q8N3Y3 721 aa10.05□□□□□ -0.8
CHD6-201ENST00000309279 JDP2Q8WYK2 163 aa10.05□□□□□ -0.8
CHD6-201ENST00000309279 LPIN2Q92539 896 aa10.05□□□□□ -0.8
CHD6-201ENST00000309279 GPR101Q96P66 508 aaPredicted RBP10.05□□□□□ -0.8
CHD6-201ENST00000309279 EXOC6BQ9Y2D4 811 aa10.05□□□□□ -0.8
CHD6-201ENST00000309279 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.05□□□□□ -0.8
CHD6-201ENST00000309279 RIMBP2O15034 1052 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 KLRK1P26718 216 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 FOSBP53539 338 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 MCM6Q14566 821 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 ERC1Q8IUD2 1116 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 GPR108Q9NPR9 543 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 ZNRF3Q9ULT6 936 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 AKAP2Q9Y2D5 859 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 TIAM2Q8IVF5 1701 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 HMGB1P1B2RPK0 211 aaPredicted RBP10.04□□□□□ -0.8
CHD6-201ENST00000309279 IFIT1P09914 478 aaKnown RBP10.04□□□□□ -0.8
CHD6-201ENST00000309279 ATP2B3Q16720 1220 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 PODNQ7Z5L7 613 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 NIM1KQ8IY84 436 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 UBXN4Q92575 508 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 FAM84BQ96KN1 310 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms