RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 ZNF532Q9HCE3 1301 aa26.74■■□□□ 1.87
PDLIM2-202ENST00000308354 ME3Q16798 604 aa26.74■■□□□ 1.87
PDLIM2-202ENST00000308354 SLC51AQ86UW1 340 aa26.74■■□□□ 1.87
PDLIM2-202ENST00000308354 PDE6AP16499 860 aa26.73■■□□□ 1.87
PDLIM2-202ENST00000308354 ZSCAN25Q6NSZ9 544 aa26.73■■□□□ 1.87
PDLIM2-202ENST00000308354 CCDC83Q8IWF9 413 aa26.73■■□□□ 1.87
PDLIM2-202ENST00000308354 NECAB1Q8N987 351 aa26.73■■□□□ 1.87
PDLIM2-202ENST00000308354 TOB2Q14106 344 aaPredicted RBP26.72■■□□□ 1.87
PDLIM2-202ENST00000308354 CHAMP1Q96JM3 812 aa26.72■■□□□ 1.87
PDLIM2-202ENST00000308354 TNRC6CQ9HCJ0 1690 aaKnown RBP26.72■■□□□ 1.87
PDLIM2-202ENST00000308354 FSD2A1L4K1 749 aa26.71■■□□□ 1.87
PDLIM2-202ENST00000308354 APBA3O96018 575 aa26.71■■□□□ 1.87
PDLIM2-202ENST00000308354 KLRK1P26718 216 aa26.71■■□□□ 1.87
PDLIM2-202ENST00000308354 UBE4AQ14139 1066 aa26.71■■□□□ 1.87
PDLIM2-202ENST00000308354 PRR5LQ6MZQ0 368 aa26.71■■□□□ 1.87
PDLIM2-202ENST00000308354 MYH7P12883 1935 aa26.71■■□□□ 1.87
PDLIM2-202ENST00000308354 GOLGA6L3A6NEY3 463 aa26.71■■□□□ 1.87
PDLIM2-202ENST00000308354 BRD1O95696 1058 aa26.71■■□□□ 1.87
PDLIM2-202ENST00000308354 HAND2P61296 217 aa26.71■■□□□ 1.87
PDLIM2-202ENST00000308354 LRRC2Q9BYS8 371 aa26.71■■□□□ 1.87
PDLIM2-202ENST00000308354 FGAP02671 866 aa26.7■■□□□ 1.87
PDLIM2-202ENST00000308354 UBE3CQ15386 1083 aa26.7■■□□□ 1.87
PDLIM2-202ENST00000308354 MAGEB6Q8N7X4 407 aa26.7■■□□□ 1.87
PDLIM2-202ENST00000308354 TCRBV5S4A2TA0A5A2 114 aa26.7■■□□□ 1.86
PDLIM2-202ENST00000308354 RXRBP28702 533 aa26.7■■□□□ 1.86
PDLIM2-202ENST00000308354 ST3GAL1Q11201 340 aa26.7■■□□□ 1.86
PDLIM2-202ENST00000308354 L1TD1Q5T7N2 865 aaKnown RBP26.7■■□□□ 1.86
PDLIM2-202ENST00000308354 E7EWF7 191 aa26.69■■□□□ 1.86
PDLIM2-202ENST00000308354 ZSCAN31Q96LW9 406 aaPredicted RBP26.69■■□□□ 1.86
PDLIM2-202ENST00000308354 LMBRD1Q9NUN5 540 aa26.69■■□□□ 1.86
PDLIM2-202ENST00000308354 DDX49Q9Y6V7 483 aaKnown RBP26.69■■□□□ 1.86
PDLIM2-202ENST00000308354 SERPINB2P05120 415 aa26.68■■□□□ 1.86
PDLIM2-202ENST00000308354 MAP3K12Q12852 859 aa26.68■■□□□ 1.86
PDLIM2-202ENST00000308354 ZNF827Q17R98 1081 aa26.68■■□□□ 1.86
PDLIM2-202ENST00000308354 VPS37DQ86XT2 251 aa26.68■■□□□ 1.86
PDLIM2-202ENST00000308354 TFCP2L1Q9NZI6 479 aa26.68■■□□□ 1.86
PDLIM2-202ENST00000308354 Q6ZUG5 572 aa26.67■■□□□ 1.86
PDLIM2-202ENST00000308354 FAM84BQ96KN1 310 aaPredicted RBP26.67■■□□□ 1.86
PDLIM2-202ENST00000308354 SH2B1Q9NRF2 756 aaPredicted RBP26.67■■□□□ 1.86
PDLIM2-202ENST00000308354 KLHL40Q2TBA0 621 aa26.67■■□□□ 1.86
PDLIM2-202ENST00000308354 CAVIN4Q5BKX8 364 aa26.67■■□□□ 1.86
PDLIM2-202ENST00000308354 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.67■■□□□ 1.86
PDLIM2-202ENST00000308354 A0A1B0GUL6 1792 aa26.67■■□□□ 1.86
PDLIM2-202ENST00000308354 ZNF804BA4D1E1 1349 aa26.67■■□□□ 1.86
PDLIM2-202ENST00000308354 STK3Q13188 491 aa26.66■■□□□ 1.86
PDLIM2-202ENST00000308354 ANKRD1Q15327 319 aa26.66■■□□□ 1.86
PDLIM2-202ENST00000308354 CHST3Q7LGC8 479 aa26.66■■□□□ 1.86
PDLIM2-202ENST00000308354 LRP2BPQ9P2M1 347 aa26.66■■□□□ 1.86
PDLIM2-202ENST00000308354 ABCF2Q9UG63 623 aa26.66■■□□□ 1.86
PDLIM2-202ENST00000308354 SMC3Q9UQE7 1217 aa26.66■■□□□ 1.86
PDLIM2-202ENST00000308354 APPP05067 770 aa26.65■■□□□ 1.86
PDLIM2-202ENST00000308354 DDR1Q08345 913 aa26.65■■□□□ 1.86
PDLIM2-202ENST00000308354 AIDAQ96BJ3 306 aa26.65■■□□□ 1.86
PDLIM2-202ENST00000308354 ALDH8A1Q9H2A2 487 aaPredicted RBP26.65■■□□□ 1.86
PDLIM2-202ENST00000308354 CTNNA3Q9UI47 895 aa26.65■■□□□ 1.86
PDLIM2-202ENST00000308354 GNL3LQ9NVN8 582 aaKnown RBP26.65■■□□□ 1.86
PDLIM2-202ENST00000308354 PRPF40AO75400 957 aaKnown RBP26.64■■□□□ 1.86
PDLIM2-202ENST00000308354 IMMTQ16891 758 aaKnown RBP26.64■■□□□ 1.86
PDLIM2-202ENST00000308354 PLSCR1O15162 318 aa26.63■■□□□ 1.85
PDLIM2-202ENST00000308354 FGD1P98174 961 aa26.63■■□□□ 1.85
PDLIM2-202ENST00000308354 DHX32Q7L7V1 743 aaKnown RBP26.63■■□□□ 1.85
PDLIM2-202ENST00000308354 ANKRD2Q9GZV1 360 aa26.63■■□□□ 1.85
PDLIM2-202ENST00000308354 COL1A1P02452 1464 aaPredicted RBP26.63■■□□□ 1.85
PDLIM2-202ENST00000308354 BRF1Q92994 677 aa26.63■■□□□ 1.85
PDLIM2-202ENST00000308354 MBD4O95243 580 aa26.62■■□□□ 1.85
PDLIM2-202ENST00000308354 XRCC6P12956 609 aaKnown RBP eCLIP26.62■■□□□ 1.85
PDLIM2-202ENST00000308354 GJB2P29033 226 aa26.62■■□□□ 1.85
PDLIM2-202ENST00000308354 GRAPQ13588 217 aa26.62■■□□□ 1.85
PDLIM2-202ENST00000308354 TXNRD3Q86VQ6 643 aa26.62■■□□□ 1.85
PDLIM2-202ENST00000308354 GRAPLQ8TC17 118 aaPredicted RBP26.62■■□□□ 1.85
PDLIM2-202ENST00000308354 STRBPQ96SI9 672 aaKnown RBP26.62■■□□□ 1.85
PDLIM2-202ENST00000308354 ARMT1Q9H993 441 aa26.62■■□□□ 1.85
PDLIM2-202ENST00000308354 ST5P78524 1137 aa26.62■■□□□ 1.85
PDLIM2-202ENST00000308354 FOXD4L6Q3SYB3 417 aaPredicted RBP26.62■■□□□ 1.85
PDLIM2-202ENST00000308354 FOXD4L3Q6VB84 417 aaPredicted RBP26.62■■□□□ 1.85
PDLIM2-202ENST00000308354 HMGB1P09429 215 aaKnown RBP26.61■■□□□ 1.85
PDLIM2-202ENST00000308354 MIGA1Q8NAN2 632 aa26.61■■□□□ 1.85
PDLIM2-202ENST00000308354 RPGRQ92834 1020 aaKnown RBP26.61■■□□□ 1.85
PDLIM2-202ENST00000308354 RGS17Q9UGC6 210 aaPredicted RBP26.61■■□□□ 1.85
PDLIM2-202ENST00000308354 POLRMTO00411 1230 aaKnown RBP26.61■■□□□ 1.85
PDLIM2-202ENST00000308354 FBXO33Q7Z6M2 555 aa26.61■■□□□ 1.85
PDLIM2-202ENST00000308354 ANKIB1Q9P2G1 1089 aa26.61■■□□□ 1.85
PDLIM2-202ENST00000308354 LAMA4Q16363 1823 aa26.6■■□□□ 1.85
PDLIM2-202ENST00000308354 TCHHQ07283 1943 aa26.6■■□□□ 1.85
PDLIM2-202ENST00000308354 ZNF213O14771 459 aa26.6■■□□□ 1.85
PDLIM2-202ENST00000308354 EXOSC10Q01780 885 aaKnown RBP26.6■■□□□ 1.85
PDLIM2-202ENST00000308354 COL23A1Q86Y22 540 aaPredicted RBP26.6■■□□□ 1.85
PDLIM2-202ENST00000308354 RAI14Q9P0K7 980 aa26.6■■□□□ 1.85
PDLIM2-202ENST00000308354 WDR33Q9C0J8 1336 aaKnown RBP26.6■■□□□ 1.85
PDLIM2-202ENST00000308354 DOCK2Q92608 1830 aa26.6■■□□□ 1.85
PDLIM2-202ENST00000308354 SYT1P21579 422 aa26.59■■□□□ 1.85
PDLIM2-202ENST00000308354 NCLP19338 710 aaKnown RBP26.59■■□□□ 1.85
PDLIM2-202ENST00000308354 ADGRA1Q86SQ6 560 aa26.59■■□□□ 1.85
PDLIM2-202ENST00000308354 AKT1S1Q96B36 256 aa26.59■■□□□ 1.85
PDLIM2-202ENST00000308354 HIBADHP31937 336 aaKnown RBP26.58■■□□□ 1.85
PDLIM2-202ENST00000308354 GAS2L3Q86XJ1 694 aa26.58■■□□□ 1.85
PDLIM2-202ENST00000308354 LCORLQ8N3X6 602 aa26.58■■□□□ 1.85
PDLIM2-202ENST00000308354 JAG2Q9Y219 1238 aa26.58■■□□□ 1.85
PDLIM2-202ENST00000308354 PRKAB2O43741 272 aa26.58■■□□□ 1.85
PDLIM2-202ENST00000308354 POTEAQ6S8J7 498 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms